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Cow genome map

           
Conread name:
           
rcsk29_e20.y1
        

               
Conread position:
               
93-356
               

               
Cow position:
               
chr14:6735665-6735940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
94-410
               

               
Cow position:
               
chr14:19827282-19827621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 262
               

               
Conread position:
               
95-387
               

               
Cow position:
               
chr14:1859423-1859725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
40, 8
               

               
Conread position:
               
100-355
               

               
Cow position:
               
chr14:38747853-38747601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 18
               

               
Conread position:
               
100-372
               

               
Cow position:
               
chr14:9837701-9837988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
103-367
               

               
Cow position:
               
chr14:6175767-6175508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
104-410
               

               
Cow position:
               
chr14:13810121-13809805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
105-350
               

               
Cow position:
               
chr14:32452435-32452177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
105-356
               

               
Cow position:
               
chr14:20600571-20600307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
7, 119
               

               
Conread position:
               
108-361
               

               
Cow position:
               
chr14:22941540-22941813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
108-409
               

               
Cow position:
               
chr14:33773875-33774172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
41, 111
               

               
Conread position:
               
112-349
               

               
Cow position:
               
chr14:34775583-34775817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
164, 34
               

               
Conread position:
               
115-347
               

               
Cow position:
               
chr14:26097524-26097762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
34, 13
               

               
Conread position:
               
119-354
               

               
Cow position:
               
chr14:27275328-27275087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
119-359
               

               
Cow position:
               
chr14:19863269-19863515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
120-350
               

               
Cow position:
               
chr14:44848203-44848441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
29, 95
               

               
Conread position:
               
120-356
               

               
Cow position:
               
chr14:8750236-8749999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 20
               

               
Conread position:
               
121-356
               

               
Cow position:
               
chr14:34331167-34331404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 13
               

               
Conread position:
               
121-406
               

               
Cow position:
               
chr14:8786392-8786682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
121-410
               

               
Cow position:
               
chr14:6541554-6541876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
12, 108
               

               
Conread position:
               
122-410
               

               
Cow position:
               
chr14:1868637-1868937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
29, 14
               

               
Conread position:
               
123-372
               

               
Cow position:
               
chr14:29698192-29698451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
123-406
               

               
Cow position:
               
chr14:33247268-33247565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
123-406
               

               
Cow position:
               
chr14:40754079-40754389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
124-337
               

               
Cow position:
               
chr14:42330516-42330294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
124-340
               

               
Cow position:
               
chr14:27591789-27592018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
25, 107
               

               
Conread position:
               
124-355
               

               
Cow position:
               
chr14:40165588-40165350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 93
               

               
Conread position:
               
124-404
               

               
Cow position:
               
chr14:21357711-21357414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
25, 10
               

               
Conread position:
               
124-408
               

               
Cow position:
               
chr14:48773069-48772770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
25, 103
               

               
Conread position:
               
125-350
               

               
Cow position:
               
chr14:10078432-10078196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
125-404
               

               
Cow position:
               
chr14:38168847-38168561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
5, 62
               

               
Conread position:
               
129-343
               

               
Cow position:
               
chr14:18657445-18657672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
129-350
               

               
Cow position:
               
chr14:28004136-28003896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
20, 135
               

               
Conread position:
               
129-356
               

               
Cow position:
               
chr14:25779250-25779025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
129-359
               

               
Cow position:
               
chr14:34984023-34983786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
129-385
               

               
Cow position:
               
chr14:14187492-14187224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
20, 136
               

               
Conread position:
               
129-404
               

               
Cow position:
               
chr14:8541053-8541350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 87
               

               
Conread position:
               
129-405
               

               
Cow position:
               
chr14:7959927-7959654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
20, 5
               

               
Conread position:
               
129-406
               

               
Cow position:
               
chr14:23424416-23424120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
20, 5
               

               
Conread position:
               
129-406
               

               
Cow position:
               
chr14:23443177-23442881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
20, 5
               

               
Conread position:
               
131-340
               

               
Cow position:
               
chr14:25403780-25403997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
131-340
               

               
Cow position:
               
chr14:39778908-39778690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
131-343
               

               
Cow position:
               
chr14:10697359-10697566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
56, 20
               

               
Conread position:
               
131-347
               

               
Cow position:
               
chr14:35018597-35018822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
131-348
               

               
Cow position:
               
chr14:10609842-10609610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 83
               

               
Conread position:
               
131-348
               

               
Cow position:
               
chr14:50362951-50362724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 89
               

               
Conread position:
               
131-349
               

               
Cow position:
               
chr14:19129667-19129435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
131-349
               

               
Cow position:
               
chr14:28378518-28378288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
18, 102
               

               
Conread position:
               
131-350
               

               
Cow position:
               
chr14:19593982-19594209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 40
               

               
Conread position:
               
131-350
               

               
Cow position:
               
chr14:48838753-48838523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
131-354
               

               
Cow position:
               
chr14:14466319-14466532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
131-354
               

               
Cow position:
               
chr14:40283773-40283542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 116
               

               
Conread position:
               
131-355
               

               
Cow position:
               
chr14:41966398-41966154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 88
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr14:1646034-1646262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr14:4877074-4877307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
18, 89
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr14:12035565-12035331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr14:16033166-16032934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
20, 89
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr14:19618594-19618828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
36, 96
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr14:19951727-19951488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
18, 91
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr14:24981612-24981381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr14:26442182-26442418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr14:27077143-27076899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr14:33830454-33830224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
18, 89
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr14:34199691-34199921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr14:37131813-37131584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr14:37883760-37883994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
18, 95
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr14:38921107-38920874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
20, 90
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr14:45605249-45605020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 126
               

               
Conread position:
               
131-357
               

               
Cow position:
               
chr14:18345576-18345806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 95
               

               
Conread position:
               
131-363
               

               
Cow position:
               
chr14:4991156-4990919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
131-363
               

               
Cow position:
               
chr14:22583299-22583070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
55, 80
               

               
Conread position:
               
131-366
               

               
Cow position:
               
chr14:17841131-17841379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 91
               

               
Conread position:
               
131-384
               

               
Cow position:
               
chr14:19189194-19188931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
20, 72
               

               
Conread position:
               
131-385
               

               
Cow position:
               
chr14:8101947-8101677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 96
               

               
Conread position:
               
131-402
               

               
Cow position:
               
chr14:13042914-13042618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
131-404
               

               
Cow position:
               
chr14:47027211-47027496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
23, 175
               

               
Conread position:
               
131-405
               

               
Cow position:
               
chr14:4202936-4203236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
20, 293
               

               
Conread position:
               
131-405
               

               
Cow position:
               
chr14:47672727-47673022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
131-406
               

               
Cow position:
               
chr14:9020185-9019896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 117
               

               
Conread position:
               
131-406
               

               
Cow position:
               
chr14:35503522-35503218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
131-406
               

               
Cow position:
               
chr14:36289643-36289936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
131-406
               

               
Cow position:
               
chr14:36555000-36555275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
131-406
               

               
Cow position:
               
chr14:49021745-49022025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 73
               

               
Conread position:
               
131-406
               

               
Cow position:
               
chr14:49824468-49824758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 95
               

               
Conread position:
               
131-407
               

               
Cow position:
               
chr14:24387606-24387305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr14:16237349-16237658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
18, 273
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr14:22989192-22988887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
19, 130
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr14:24922259-24921950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 90
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr14:27919580-27919883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
21, 97
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr14:5836059-5835781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr14:15997610-15997900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
41, 25
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr14:16256924-16256625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
19, 232
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr14:16549846-16550143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 96
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr14:20110565-20110871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr14:24417042-24416745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 225
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr14:25903682-25903383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
50, 90
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr14:36254549-36254838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
19, 47
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr14:41211011-41210715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
18, 80
               

               
Conread position:
               
134-355
               

               
Cow position:
               
chr14:28115031-28115263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
17, 95
               

               
Conread position:
               
134-369
               

               
Cow position:
               
chr14:33309353-33309593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
33, 88
               

               
Conread position:
               
134-400
               

               
Cow position:
               
chr14:37447315-37447582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 82
               

               
Conread position:
               
134-406
               

               
Cow position:
               
chr14:18941148-18941433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
18, 57
               

               
Conread position:
               
134-406
               

               
Cow position:
               
chr14:44084323-44084621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
134-407
               

               
Cow position:
               
chr14:23712842-23712549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
17, 77
               

               
Conread position:
               
134-410
               

               
Cow position:
               
chr14:109352-109627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 61
               

               
Conread position:
               
134-410
               

               
Cow position:
               
chr14:24236978-24236673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 92
               

               
Conread position:
               
135-410
               

               
Cow position:
               
chr14:39037389-39037090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
16, 191
               

               
Conread position:
               
135-410
               

               
Cow position:
               
chr14:45677378-45677082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
136-348
               

               
Cow position:
               
chr14:1868231-1868453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 85
               

               
Conread position:
               
136-348
               

               
Cow position:
               
chr14:19394512-19394293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 71
               

               
Conread position:
               
136-406
               

               
Cow position:
               
chr14:12511749-12512036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
13, 91
               

               
Conread position:
               
136-409
               

               
Cow position:
               
chr14:12244229-12244530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
15, 84
               

               
Conread position:
               
137-406
               

               
Cow position:
               
chr14:48427225-48426927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 70
               

               
Conread position:
               
137-410
               

               
Cow position:
               
chr14:39770081-39770370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
14, 70
               

               
Conread position:
               
138-410
               

               
Cow position:
               
chr14:20640476-20640778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
139-349
               

               
Cow position:
               
chr14:7036205-7036428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
139-349
               

               
Cow position:
               
chr14:38143961-38144178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
11, 84
               

               
Conread position:
               
139-354
               

               
Cow position:
               
chr14:4282366-4282582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
139-355
               

               
Cow position:
               
chr14:11056590-11056806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
10, 78
               

               
Conread position:
               
139-356
               

               
Cow position:
               
chr14:14317031-14316809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
29, 80
               

               
Conread position:
               
139-357
               

               
Cow position:
               
chr14:7695411-7695185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
12, 83
               

               
Conread position:
               
139-401
               

               
Cow position:
               
chr14:18904462-18904728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
139-404
               

               
Cow position:
               
chr14:37422638-37422916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
10, 100
               

               
Conread position:
               
139-409
               

               
Cow position:
               
chr14:18309147-18309448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
139-410
               

               
Cow position:
               
chr14:12954233-12954524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
7, 100
               

               
Conread position:
               
139-410
               

               
Cow position:
               
chr14:41252839-41253128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
12, 151
               

               
Conread position:
               
140-356
               

               
Cow position:
               
chr14:42437174-42436947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
9, 90
               

               
Conread position:
               
141-343
               

               
Cow position:
               
chr14:26654984-26655199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
8, 89
               

               
Conread position:
               
141-344
               

               
Cow position:
               
chr14:48412732-48412948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
141-349
               

               
Cow position:
               
chr14:11285716-11285509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
17, 7
               

               
Conread position:
               
141-355
               

               
Cow position:
               
chr14:47511097-47510883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
141-363
               

               
Cow position:
               
chr14:1977923-1978158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
8, 76
               

               
Conread position:
               
141-367
               

               
Cow position:
               
chr14:24945347-24945581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
141-385
               

               
Cow position:
               
chr14:41128042-41127786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
8, 73
               

               
Conread position:
               
141-386
               

               
Cow position:
               
chr14:23478964-23478729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
141-387
               

               
Cow position:
               
chr14:30662134-30661893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
8, 73
               

               
Conread position:
               
141-406
               

               
Cow position:
               
chr14:7647886-7648146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
131, 9
               

               
Conread position:
               
141-410
               

               
Cow position:
               
chr14:5630308-5630019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
143-355
               

               
Cow position:
               
chr14:39926344-39926133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 68
               

               
Conread position:
               
148-356
               

               
Cow position:
               
chr14:12634749-12634959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
27, 63
               

               
Conread position:
               
149-343
               

               
Cow position:
               
chr14:42419136-42419338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
149-350
               

               
Cow position:
               
chr14:48496010-48496216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
153-410
               

               
Cow position:
               
chr14:16352473-16352209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
34, 10
               

               
Conread position:
               
156-356
               

               
Cow position:
               
chr14:16834451-16834244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
157-410
               

               
Cow position:
               
chr14:14622055-14622317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
158-406
               

               
Cow position:
               
chr14:25385762-25386012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 52
               

               
Conread position:
               
171-350
               

               
Cow position:
               
chr14:10693148-10693325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
171-350
               

               
Cow position:
               
chr14:33751647-33751466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
171-356
               

               
Cow position:
               
chr14:41486149-41486338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
171-406
               

               
Cow position:
               
chr14:41267640-41267868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
16, 37
               

               
Conread position:
               
171-406
               

               
Cow position:
               
chr14:41837761-41838004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
171-408
               

               
Cow position:
               
chr14:46998147-46997905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
171-409
               

               
Cow position:
               
chr14:23103886-23104144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
16, 7
               

               
Conread position:
               
171-410
               

               
Cow position:
               
chr14:40209011-40208759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
18, 56
               

               
Conread position:
               
173-344
               

               
Cow position:
               
chr14:803796-803620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 120
               

               
Conread position:
               
173-356
               

               
Cow position:
               
chr14:15039503-15039691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
14, 8
               

               
Conread position:
               
175-349
               

               
Cow position:
               
chr14:29965124-29964949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
175-357
               

               
Cow position:
               
chr14:48744620-48744437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
175-406
               

               
Cow position:
               
chr14:1796297-1796052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 47
               

               
Conread position:
               
178-410
               

               
Cow position:
               
chr14:25399177-25398949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 55
               

               
Conread position:
               
178-410
               

               
Cow position:
               
chr14:49488065-49487815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
179-410
               

               
Cow position:
               
chr14:13928672-13928433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
186-354
               

               
Cow position:
               
chr14:3943459-3943626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
85, 28
               

               
Conread position:
               
186-405
               

               
Cow position:
               
chr14:25381515-25381296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
163, 20
               

               
Conread position:
               
186-407
               

               
Cow position:
               
chr14:37902093-37901854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
189-409
               

               
Cow position:
               
chr14:36442926-36443165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
83, 35
               

               
Conread position:
               
194-356
               

               
Cow position:
               
chr14:20481754-20481920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
200-349
               

               
Cow position:
               
chr14:4848430-4848277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
212-410
               

               
Cow position:
               
chr14:2038735-2038935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
11, 137
               

               
Conread position:
               
215-410
               

               
Cow position:
               
chr14:19487362-19487164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
58, 177
               

               
Conread position:
               
223-410
               

               
Cow position:
               
chr14:11729051-11729256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
225-406
               

               
Cow position:
               
chr14:36775707-36775518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
226-404
               

               
Cow position:
               
chr14:1431776-1431962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 169
               

               
Conread position:
               
227-404
               

               
Cow position:
               
chr14:23078737-23078935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
227-405
               

               
Cow position:
               
chr14:11567460-11567269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
44, 119
               

               
Conread position:
               
227-410
               

               
Cow position:
               
chr14:20466985-20466787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
45, 29
               

               
Conread position:
               
228-410
               

               
Cow position:
               
chr14:48213134-48212953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 72
               

               
Conread position:
               
229-359
               

               
Cow position:
               
chr14:16749632-16749766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
233-361
               

               
Cow position:
               
chr14:15491205-15491074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
39, 114
               

               
Conread position:
               
233-406
               

               
Cow position:
               
chr14:16207449-16207634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
233-410
               

               
Cow position:
               
chr14:37934163-37933982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
238-410
               

               
Cow position:
               
chr14:26805011-26805182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
34, 10
               

               
Conread position:
               
239-392
               

               
Cow position:
               
chr14:3173694-3173852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 154
               

               
Conread position:
               
242-356
               

               
Cow position:
               
chr14:37436670-37436788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
242-363
               

               
Cow position:
               
chr14:42276663-42276541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
248-410
               

               
Cow position:
               
chr14:19349871-19349699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
252-356
               

               
Cow position:
               
chr14:24785688-24785580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
252-410
               

               
Cow position:
               
chr14:24991511-24991348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
257-354
               

               
Cow position:
               
chr14:24806619-24806519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
257-406
               

               
Cow position:
               
chr14:49563755-49563916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
258-410
               

               
Cow position:
               
chr14:14580848-14580694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
271-405
               

               
Cow position:
               
chr14:445294-445152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
271-410
               

               
Cow position:
               
chr14:40806604-40806747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
78, 129
               

               
Conread position:
               
273-410
               

               
Cow position:
               
chr14:24845972-24845830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
274-410
               

               
Cow position:
               
chr14:46114149-46114288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
103, 71
               

               
Conread position:
               
275-406
               

               
Cow position:
               
chr14:24799704-24799834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
109, 70
               
Show alignments to all cow chromosomes.