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Cow genome map

           
Conread name:
           
rcsk29_e20.y1
        

               
Conread position:
               
47-344
               

               
Cow position:
               
chr24:19736555-19736251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
59, 7
               

               
Conread position:
               
60-356
               

               
Cow position:
               
chr24:32739481-32739178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
81-344
               

               
Cow position:
               
chr24:17752307-17752029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
29, 17
               

               
Conread position:
               
100-340
               

               
Cow position:
               
chr24:201803-201557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
102-406
               

               
Cow position:
               
chr24:32124805-32124492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
48, 16
               

               
Conread position:
               
102-410
               

               
Cow position:
               
chr24:41985821-41986141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
8, 34
               

               
Conread position:
               
103-342
               

               
Cow position:
               
chr24:32370085-32369833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
105-343
               

               
Cow position:
               
chr24:43364195-43364441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
105-406
               

               
Cow position:
               
chr24:16994722-16995041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 98
               

               
Conread position:
               
105-410
               

               
Cow position:
               
chr24:17832978-17832662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
111-347
               

               
Cow position:
               
chr24:26732298-26732536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 17
               

               
Conread position:
               
113-401
               

               
Cow position:
               
chr24:24662286-24661992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
114-350
               

               
Cow position:
               
chr24:34272654-34272900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
114-406
               

               
Cow position:
               
chr24:11840030-11840347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
115-357
               

               
Cow position:
               
chr24:40850010-40850250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
115-406
               

               
Cow position:
               
chr24:38841559-38841270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
34, 95
               

               
Conread position:
               
119-410
               

               
Cow position:
               
chr24:30545009-30544723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
30, 9
               

               
Conread position:
               
121-356
               

               
Cow position:
               
chr24:814414-814174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 13
               

               
Conread position:
               
122-357
               

               
Cow position:
               
chr24:29063796-29063562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
122-409
               

               
Cow position:
               
chr24:18999905-19000209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
48, 29
               

               
Conread position:
               
122-410
               

               
Cow position:
               
chr24:32054511-32054811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
27, 98
               

               
Conread position:
               
122-410
               

               
Cow position:
               
chr24:42103227-42103528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 81
               

               
Conread position:
               
124-340
               

               
Cow position:
               
chr24:8886769-8886990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 89
               

               
Conread position:
               
124-406
               

               
Cow position:
               
chr24:28233902-28234204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
125-410
               

               
Cow position:
               
chr24:3493745-3494048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
5, 86
               

               
Conread position:
               
128-352
               

               
Cow position:
               
chr24:29170827-29171053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
129-354
               

               
Cow position:
               
chr24:15861742-15861500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 110
               

               
Conread position:
               
129-356
               

               
Cow position:
               
chr24:16895577-16895341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 7
               

               
Conread position:
               
129-356
               

               
Cow position:
               
chr24:29673379-29673618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
20, 5
               

               
Conread position:
               
129-356
               

               
Cow position:
               
chr24:31159475-31159711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
22, 92
               

               
Conread position:
               
131-340
               

               
Cow position:
               
chr24:27726155-27725932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
20, 91
               

               
Conread position:
               
131-341
               

               
Cow position:
               
chr24:30897678-30897457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 209
               

               
Conread position:
               
131-344
               

               
Cow position:
               
chr24:29679443-29679229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
131-347
               

               
Cow position:
               
chr24:18970647-18970421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 83
               

               
Conread position:
               
131-348
               

               
Cow position:
               
chr24:31324141-31324372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
18, 196
               

               
Conread position:
               
131-349
               

               
Cow position:
               
chr24:5754698-5754924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
18, 96
               

               
Conread position:
               
131-349
               

               
Cow position:
               
chr24:16645463-16645230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
131-349
               

               
Cow position:
               
chr24:32204934-32204706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 97
               

               
Conread position:
               
131-350
               

               
Cow position:
               
chr24:15347454-15347679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
36, 101
               

               
Conread position:
               
131-350
               

               
Cow position:
               
chr24:28319340-28319119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
131-350
               

               
Cow position:
               
chr24:43967641-43967413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
18, 108
               

               
Conread position:
               
131-354
               

               
Cow position:
               
chr24:28327224-28326988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
18, 228
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr24:18331584-18331816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
18, 73
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr24:24250588-24250818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
19, 147
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr24:27290731-27290967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr24:29595950-29595715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr24:30235733-30235967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr24:32070826-32071059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 83
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr24:33944264-33944497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
35, 90
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr24:34390157-34390372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr24:34742615-34742849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
18, 94
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr24:38006845-38006621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
131-363
               

               
Cow position:
               
chr24:15373269-15373508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
131-380
               

               
Cow position:
               
chr24:20943027-20943281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
131-386
               

               
Cow position:
               
chr24:16268253-16268005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
131-387
               

               
Cow position:
               
chr24:19769355-19769625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
59, 100
               

               
Conread position:
               
131-402
               

               
Cow position:
               
chr24:11887021-11887312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
131-402
               

               
Cow position:
               
chr24:44041151-44040852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 211
               

               
Conread position:
               
131-404
               

               
Cow position:
               
chr24:30229337-30229635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
131-406
               

               
Cow position:
               
chr24:16509831-16510134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
18, 89
               

               
Conread position:
               
131-406
               

               
Cow position:
               
chr24:37037757-37038054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
19, 99
               

               
Conread position:
               
131-406
               

               
Cow position:
               
chr24:41423469-41423759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
20, 90
               

               
Conread position:
               
131-407
               

               
Cow position:
               
chr24:31816448-31816739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr24:19800707-19801005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr24:28699918-28700209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr24:28721751-28722043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr24:211845-212137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr24:1269658-1269944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr24:6132013-6131720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr24:17104712-17104405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
18, 108
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr24:24755304-24755596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
14, 269
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr24:27844662-27844366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr24:28553687-28553405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
18, 80
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr24:30484090-30483777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr24:34396314-34396023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
19, 86
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr24:37945771-37945479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 109
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr24:39850024-39849725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr24:42825634-42825348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 86
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr24:43635298-43635581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
18, 91
               

               
Conread position:
               
132-342
               

               
Cow position:
               
chr24:28690549-28690766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
17, 98
               

               
Conread position:
               
133-410
               

               
Cow position:
               
chr24:31812050-31812352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
134-340
               

               
Cow position:
               
chr24:3430596-3430813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
17, 73
               

               
Conread position:
               
134-347
               

               
Cow position:
               
chr24:21519302-21519514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
134-350
               

               
Cow position:
               
chr24:17294328-17294109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 144
               

               
Conread position:
               
134-354
               

               
Cow position:
               
chr24:352742-352513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 93
               

               
Conread position:
               
134-355
               

               
Cow position:
               
chr24:28289386-28289159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 77
               

               
Conread position:
               
134-356
               

               
Cow position:
               
chr24:34008713-34008477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
134-410
               

               
Cow position:
               
chr24:15508674-15508402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
33, 93
               

               
Conread position:
               
134-410
               

               
Cow position:
               
chr24:27713541-27713243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
135-343
               

               
Cow position:
               
chr24:2096026-2095799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
14, 79
               

               
Conread position:
               
135-349
               

               
Cow position:
               
chr24:10299951-10300165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
135-350
               

               
Cow position:
               
chr24:33153641-33153866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
135-404
               

               
Cow position:
               
chr24:44987514-44987211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
136-349
               

               
Cow position:
               
chr24:29586860-29587087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
13, 221
               

               
Conread position:
               
136-355
               

               
Cow position:
               
chr24:43200411-43200181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 215
               

               
Conread position:
               
136-406
               

               
Cow position:
               
chr24:17311346-17311066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
13, 163
               

               
Conread position:
               
137-353
               

               
Cow position:
               
chr24:27418232-27418011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
137-385
               

               
Cow position:
               
chr24:28990430-28990700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
12, 89
               

               
Conread position:
               
137-387
               

               
Cow position:
               
chr24:25885295-25885029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
137-410
               

               
Cow position:
               
chr24:35675411-35675698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
138-386
               

               
Cow position:
               
chr24:16895257-16895008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
25, 70
               

               
Conread position:
               
138-399
               

               
Cow position:
               
chr24:24491143-24490869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 84
               

               
Conread position:
               
139-350
               

               
Cow position:
               
chr24:2675190-2675399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
10, 71
               

               
Conread position:
               
139-354
               

               
Cow position:
               
chr24:35576666-35576446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
139-356
               

               
Cow position:
               
chr24:24457377-24457155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
10, 74
               

               
Conread position:
               
139-357
               

               
Cow position:
               
chr24:20225614-20225833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 65
               

               
Conread position:
               
139-405
               

               
Cow position:
               
chr24:7777748-7777473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 78
               

               
Conread position:
               
139-406
               

               
Cow position:
               
chr24:30314161-30313866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
10, 92
               

               
Conread position:
               
139-410
               

               
Cow position:
               
chr24:17955573-17955298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
10, 84
               

               
Conread position:
               
140-338
               

               
Cow position:
               
chr24:37395340-37395133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
10, 77
               

               
Conread position:
               
141-403
               

               
Cow position:
               
chr24:6102699-6102969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
8, 226
               

               
Conread position:
               
141-410
               

               
Cow position:
               
chr24:13352914-13353193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
8, 73
               

               
Conread position:
               
141-410
               

               
Cow position:
               
chr24:33372434-33372713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
9, 66
               

               
Conread position:
               
142-355
               

               
Cow position:
               
chr24:16089107-16089322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
7, 62
               

               
Conread position:
               
143-348
               

               
Cow position:
               
chr24:21606792-21606590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
203, 76
               

               
Conread position:
               
148-355
               

               
Cow position:
               
chr24:35150400-35150615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
148-406
               

               
Cow position:
               
chr24:15246760-15246495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
63, 240
               

               
Conread position:
               
148-410
               

               
Cow position:
               
chr24:39523569-39523283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 72
               

               
Conread position:
               
149-319
               

               
Cow position:
               
chr24:6957386-6957555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
149-356
               

               
Cow position:
               
chr24:18614884-18615096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
38, 175
               

               
Conread position:
               
149-356
               

               
Cow position:
               
chr24:39791418-39791636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
17, 206
               

               
Conread position:
               
151-357
               

               
Cow position:
               
chr24:41405779-41405991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
153-406
               

               
Cow position:
               
chr24:2402485-2402214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
14, 62
               

               
Conread position:
               
156-406
               

               
Cow position:
               
chr24:29561686-29561416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
156-410
               

               
Cow position:
               
chr24:37975093-37974816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
19, 52
               

               
Conread position:
               
158-410
               

               
Cow position:
               
chr24:22999905-23000168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
29, 219
               

               
Conread position:
               
165-331
               

               
Cow position:
               
chr24:21894953-21895120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
107, 54
               

               
Conread position:
               
166-350
               

               
Cow position:
               
chr24:34496016-34496212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
168-350
               

               
Cow position:
               
chr24:28042874-28043065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
168-410
               

               
Cow position:
               
chr24:20364506-20364249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
104, 215
               

               
Conread position:
               
171-371
               

               
Cow position:
               
chr24:7046841-7046634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 42
               

               
Conread position:
               
171-392
               

               
Cow position:
               
chr24:25164940-25165160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
171-406
               

               
Cow position:
               
chr24:42876979-42876737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
171-410
               

               
Cow position:
               
chr24:43832430-43832689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 72
               

               
Conread position:
               
173-349
               

               
Cow position:
               
chr24:27284729-27284905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
175-385
               

               
Cow position:
               
chr24:12452693-12452903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
178-410
               

               
Cow position:
               
chr24:2992964-2992713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
8, 32
               

               
Conread position:
               
186-352
               

               
Cow position:
               
chr24:29606111-29605942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
86, 163
               

               
Conread position:
               
186-357
               

               
Cow position:
               
chr24:6151718-6151885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
186-391
               

               
Cow position:
               
chr24:27202014-27202228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
187-405
               

               
Cow position:
               
chr24:18442636-18442410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
83, 32
               

               
Conread position:
               
187-405
               

               
Cow position:
               
chr24:20807460-20807686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
195-353
               

               
Cow position:
               
chr24:11007391-11007549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
196-349
               

               
Cow position:
               
chr24:27349242-27349088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
202-410
               

               
Cow position:
               
chr24:21835020-21834796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
205-356
               

               
Cow position:
               
chr24:20969720-20969569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
68, 12
               

               
Conread position:
               
205-356
               

               
Cow position:
               
chr24:22133112-22133267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
205-410
               

               
Cow position:
               
chr24:5360660-5360878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
207-410
               

               
Cow position:
               
chr24:39483423-39483630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
211-410
               

               
Cow position:
               
chr24:33244342-33244553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
6, 27
               

               
Conread position:
               
212-356
               

               
Cow position:
               
chr24:42981813-42981666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
213-404
               

               
Cow position:
               
chr24:19186891-19187093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
137, 54
               

               
Conread position:
               
215-410
               

               
Cow position:
               
chr24:25122296-25122504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
217-352
               

               
Cow position:
               
chr24:41566146-41566011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 94
               

               
Conread position:
               
226-348
               

               
Cow position:
               
chr24:7390371-7390249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
226-387
               

               
Cow position:
               
chr24:28355723-28355555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
125, 5
               

               
Conread position:
               
227-356
               

               
Cow position:
               
chr24:28470717-28470584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
227-406
               

               
Cow position:
               
chr24:2730649-2730464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
228-406
               

               
Cow position:
               
chr24:32891080-32890885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
234-406
               

               
Cow position:
               
chr24:13610281-13610464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
245-404
               

               
Cow position:
               
chr24:28024260-28024427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
245-405
               

               
Cow position:
               
chr24:31383101-31383270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
106, 38
               

               
Conread position:
               
245-410
               

               
Cow position:
               
chr24:27810139-27810316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
250-410
               

               
Cow position:
               
chr24:43349650-43349480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
252-366
               

               
Cow position:
               
chr24:18328484-18328369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
254-349
               

               
Cow position:
               
chr24:39218562-39218463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
256-356
               

               
Cow position:
               
chr24:32818308-32818206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
256-405
               

               
Cow position:
               
chr24:25971082-25970922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
272-410
               

               
Cow position:
               
chr24:6677658-6677802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
277-410
               

               
Cow position:
               
chr24:27719510-27719363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
279-410
               

               
Cow position:
               
chr24:13114774-13114909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
105, 0
               
Show alignments to all cow chromosomes.