Non-Coding RNA Search

Cow genome map


           Conread name:
           rcsk29_e20.y1
        

               Conread position:
               60-349
               

               Cow position:
               chr5:16939737-16939455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 62
               

               Conread position:
               68-349
               

               Cow position:
               chr5:53710848-53710550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               74-406
               

               Cow position:
               chr5:60210270-60209932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               23, 6
               

               Conread position:
               80-406
               

               Cow position:
               chr5:35976378-35976708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               235
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               39, 130
               

               Conread position:
               85-349
               

               Cow position:
               chr5:59873222-59872941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               64, 36
               

               Conread position:
               90-349
               

               Cow position:
               chr5:60747406-60747141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               60, 9
               

               Conread position:
               93-410
               

               Cow position:
               chr5:38832996-38833332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 26
               

               Conread position:
               94-405
               

               Cow position:
               chr5:16893898-16893565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               12, 25
               

               Conread position:
               98-410
               

               Cow position:
               chr5:18898858-18899174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               235
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               66, 20
               

               Conread position:
               100-410
               

               Cow position:
               chr5:46611218-46610899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               50, 34
               

               Conread position:
               103-406
               

               Cow position:
               chr5:11668302-11667970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               46, 15
               

               Conread position:
               103-406
               

               Cow position:
               chr5:56467581-56467884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               23, 108
               

               Conread position:
               105-356
               

               Cow position:
               chr5:30629272-30629011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               46, 13
               

               Conread position:
               105-409
               

               Cow position:
               chr5:6528568-6528881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               105-410
               

               Cow position:
               chr5:30487122-30487445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               105-410
               

               Cow position:
               chr5:30844999-30845324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               225
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               45, 16
               

               Conread position:
               107-405
               

               Cow position:
               chr5:33833928-33834253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               10, 102
               

               Conread position:
               112-356
               

               Cow position:
               chr5:49685379-49685131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               37, 107
               

               Conread position:
               114-384
               

               Cow position:
               chr5:4617262-4617534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               35, 132
               

               Conread position:
               114-385
               

               Cow position:
               chr5:35785082-35784817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               36, 57
               

               Conread position:
               115-406
               

               Cow position:
               chr5:43402792-43403123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               117-356
               

               Cow position:
               chr5:30253636-30253887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               13, 104
               

               Conread position:
               118-408
               

               Cow position:
               chr5:66815668-66815375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               31, 10
               

               Conread position:
               119-350
               

               Cow position:
               chr5:14904169-14903928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               119-406
               

               Cow position:
               chr5:29097266-29097576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               35, 17
               

               Conread position:
               120-352
               

               Cow position:
               chr5:43992221-43992466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               29, 119
               

               Conread position:
               120-356
               

               Cow position:
               chr5:37808769-37808517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               29, 16
               

               Conread position:
               120-410
               

               Cow position:
               chr5:44848119-44847809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               13, 20
               

               Conread position:
               121-356
               

               Cow position:
               chr5:54086443-54086684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               28, 90
               

               Conread position:
               122-349
               

               Cow position:
               chr5:15479027-15479264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               30, 208
               

               Conread position:
               122-354
               

               Cow position:
               chr5:26094261-26094022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               122-387
               

               Cow position:
               chr5:7057498-7057227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               29, 17
               

               Conread position:
               122-406
               

               Cow position:
               chr5:21617358-21617669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               123-349
               

               Cow position:
               chr5:63987543-63987307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               26, 90
               

               Conread position:
               123-354
               

               Cow position:
               chr5:3639584-3639353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               26, 94
               

               Conread position:
               123-356
               

               Cow position:
               chr5:67932561-67932326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               123-363
               

               Cow position:
               chr5:458395-458641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               26, 11
               

               Conread position:
               123-409
               

               Cow position:
               chr5:34050019-34050325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               124-354
               

               Cow position:
               chr5:69337732-69337964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               25, 77
               

               Conread position:
               124-356
               

               Cow position:
               chr5:66551996-66551750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               124-384
               

               Cow position:
               chr5:66366420-66366697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               66, 19
               

               Conread position:
               124-391
               

               Cow position:
               chr5:54350460-54350177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               26, 280
               

               Conread position:
               124-405
               

               Cow position:
               chr5:8024292-8024002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               25, 163
               

               Conread position:
               124-406
               

               Cow position:
               chr5:30302796-30303095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               27, 82
               

               Conread position:
               124-406
               

               Cow position:
               chr5:55232892-55232609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               25, 47
               

               Conread position:
               125-354
               

               Cow position:
               chr5:35125956-35126199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               11, 83
               

               Conread position:
               125-356
               

               Cow position:
               chr5:45845789-45845542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               5, 116
               

               Conread position:
               127-385
               

               Cow position:
               chr5:45225918-45225631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               22, 182
               

               Conread position:
               127-410
               

               Cow position:
               chr5:57101868-57101579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               22, 96
               

               Conread position:
               129-309
               

               Cow position:
               chr5:64137163-64137355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               20, 5
               

               Conread position:
               129-354
               

               Cow position:
               chr5:6503968-6503737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               20, 5
               

               Conread position:
               129-356
               

               Cow position:
               chr5:63427098-63426860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               20, 5
               

               Conread position:
               129-406
               

               Cow position:
               chr5:33560824-33560524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               20, 5
               

               Conread position:
               129-410
               

               Cow position:
               chr5:34561920-34562227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               21, 112
               

               Conread position:
               129-410
               

               Cow position:
               chr5:72951749-72952042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               21, 228
               

               Conread position:
               131-310
               

               Cow position:
               chr5:69520803-69520991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               21, 96
               

               Conread position:
               131-328
               

               Cow position:
               chr5:52645169-52644962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 89
               

               Conread position:
               131-329
               

               Cow position:
               chr5:32696911-32696704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               18, 90
               

               Conread position:
               131-337
               

               Cow position:
               chr5:35826513-35826729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 97
               

               Conread position:
               131-340
               

               Cow position:
               chr5:15598323-15598108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 175
               

               Conread position:
               131-341
               

               Cow position:
               chr5:5257383-5257157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               131-343
               

               Cow position:
               chr5:21040063-21039850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               22, 84
               

               Conread position:
               131-344
               

               Cow position:
               chr5:4218784-4218991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               18, 82
               

               Conread position:
               131-347
               

               Cow position:
               chr5:65967818-65967594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 94
               

               Conread position:
               131-348
               

               Cow position:
               chr5:5855778-5855996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               18, 66
               

               Conread position:
               131-348
               

               Cow position:
               chr5:30950006-30949777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               131-349
               

               Cow position:
               chr5:9090110-9089889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               20, 79
               

               Conread position:
               131-349
               

               Cow position:
               chr5:14473503-14473264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               131-349
               

               Cow position:
               chr5:34528472-34528685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               18, 31
               

               Conread position:
               131-349
               

               Cow position:
               chr5:69461244-69461474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               18, 186
               

               Conread position:
               131-350
               

               Cow position:
               chr5:24996313-24996083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 117
               

               Conread position:
               131-354
               

               Cow position:
               chr5:51053738-51053505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               20, 78
               

               Conread position:
               131-354
               

               Cow position:
               chr5:56317208-56317433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               20, 98
               

               Conread position:
               131-354
               

               Cow position:
               chr5:64758861-64758623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               131-354
               

               Cow position:
               chr5:66972338-66972573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               18, 80
               

               Conread position:
               131-354
               

               Cow position:
               chr5:74858483-74858719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               131-355
               

               Cow position:
               chr5:43929827-43929591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               131-355
               

               Cow position:
               chr5:50533477-50533243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               20, 100
               

               Conread position:
               131-356
               

               Cow position:
               chr5:4220894-4221123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               131-356
               

               Cow position:
               chr5:11229759-11229527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               19, 76
               

               Conread position:
               131-356
               

               Cow position:
               chr5:13717657-13717425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               18, 89
               

               Conread position:
               131-356
               

               Cow position:
               chr5:17999582-17999348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               131-356
               

               Cow position:
               chr5:20779476-20779253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               19, 35
               

               Conread position:
               131-356
               

               Cow position:
               chr5:23168915-23168680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               44, 25
               

               Conread position:
               131-356
               

               Cow position:
               chr5:23678792-23678555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               18, 194
               

               Conread position:
               131-356
               

               Cow position:
               chr5:25035333-25035112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               131-356
               

               Cow position:
               chr5:26477102-26476872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               18, 51
               

               Conread position:
               131-356
               

               Cow position:
               chr5:29827959-29828192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               19, 83
               

               Conread position:
               131-356
               

               Cow position:
               chr5:39258432-39258652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               18, 56
               

               Conread position:
               131-356
               

               Cow position:
               chr5:44752401-44752161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               131-356
               

               Cow position:
               chr5:54060187-54060424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               131-356
               

               Cow position:
               chr5:54311245-54311482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 98
               

               Conread position:
               131-356
               

               Cow position:
               chr5:54767999-54767763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               20, 98
               

               Conread position:
               131-356
               

               Cow position:
               chr5:71494730-71494967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               18, 96
               

               Conread position:
               131-357
               

               Cow position:
               chr5:20422274-20422047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 79
               

               Conread position:
               131-362
               

               Cow position:
               chr5:52000132-52000368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               19, 98
               

               Conread position:
               131-363
               

               Cow position:
               chr5:44028391-44028156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               19, 209
               

               Conread position:
               131-363
               

               Cow position:
               chr5:58856013-58856255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               16, 87
               

               Conread position:
               131-363
               

               Cow position:
               chr5:64523957-64523711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               19, 229
               

               Conread position:
               131-369
               

               Cow position:
               chr5:20783534-20783778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               19, 70
               

               Conread position:
               131-378
               

               Cow position:
               chr5:6683446-6683195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               18, 68
               

               Conread position:
               131-383
               

               Cow position:
               chr5:39447620-39447359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               131-384
               

               Cow position:
               chr5:6286514-6286261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               19, 60
               

               Conread position:
               131-387
               

               Cow position:
               chr5:35969452-35969710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               36, 72
               

               Conread position:
               131-392
               

               Cow position:
               chr5:4710235-4709969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 79
               

               Conread position:
               131-395
               

               Cow position:
               chr5:26377759-26377480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               18, 107
               

               Conread position:
               131-399
               

               Cow position:
               chr5:41713212-41713495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               19, 103
               

               Conread position:
               131-399
               

               Cow position:
               chr5:56524085-56524369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               131-401
               

               Cow position:
               chr5:24349018-24349299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               19, 89
               

               Conread position:
               131-401
               

               Cow position:
               chr5:58446713-58446997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               20, 105
               

               Conread position:
               131-401
               

               Cow position:
               chr5:71454685-71454422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               23, 78
               

               Conread position:
               131-402
               

               Cow position:
               chr5:15722156-15721878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               18, 48
               

               Conread position:
               131-404
               

               Cow position:
               chr5:16938097-16937822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               18, 48
               

               Conread position:
               131-404
               

               Cow position:
               chr5:41452754-41452479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               14, 156
               

               Conread position:
               131-404
               

               Cow position:
               chr5:50575695-50575981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               215
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               18, 80
               

               Conread position:
               131-405
               

               Cow position:
               chr5:16179614-16179310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               20, 75
               

               Conread position:
               131-405
               

               Cow position:
               chr5:18289040-18289331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               18, 98
               

               Conread position:
               131-405
               

               Cow position:
               chr5:55756515-55756200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               131-406
               

               Cow position:
               chr5:14314435-14314730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               218
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               131-406
               

               Cow position:
               chr5:22242864-22242560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               19, 264
               

               Conread position:
               131-406
               

               Cow position:
               chr5:42050461-42050758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               24, 99
               

               Conread position:
               131-406
               

               Cow position:
               chr5:45397488-45397779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               20, 92
               

               Conread position:
               131-406
               

               Cow position:
               chr5:54089952-54090227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 19
               

               Conread position:
               131-406
               

               Cow position:
               chr5:55955817-55956124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               20, 98
               

               Conread position:
               131-406
               

               Cow position:
               chr5:57935199-57934906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               19, 103
               

               Conread position:
               131-406
               

               Cow position:
               chr5:62172326-62172612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               18, 80
               

               Conread position:
               131-407
               

               Cow position:
               chr5:22643307-22643032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               56, 20
               

               Conread position:
               131-407
               

               Cow position:
               chr5:69731417-69731701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               18, 105
               

               Conread position:
               131-409
               

               Cow position:
               chr5:12901827-12902136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               131-409
               

               Cow position:
               chr5:42064113-42064424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               18, 108
               

               Conread position:
               131-410
               

               Cow position:
               chr5:7723582-7723862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               18, 52
               

               Conread position:
               131-410
               

               Cow position:
               chr5:12322891-12322593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               20, 103
               

               Conread position:
               131-410
               

               Cow position:
               chr5:15363804-15364088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               19, 37
               

               Conread position:
               131-410
               

               Cow position:
               chr5:16025547-16025265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 105
               

               Conread position:
               131-410
               

               Cow position:
               chr5:27419812-27419530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               20, 31
               

               Conread position:
               131-410
               

               Cow position:
               chr5:30276607-30276905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               20, 48
               

               Conread position:
               131-410
               

               Cow position:
               chr5:35763185-35763462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               18, 76
               

               Conread position:
               131-410
               

               Cow position:
               chr5:36039094-36038787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               18, 81
               

               Conread position:
               131-410
               

               Cow position:
               chr5:43858523-43858200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               131-410
               

               Cow position:
               chr5:44446958-44446657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               131-410
               

               Cow position:
               chr5:47696532-47696242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 145
               

               Conread position:
               131-410
               

               Cow position:
               chr5:55176800-55177098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               18, 124
               

               Conread position:
               131-410
               

               Cow position:
               chr5:64176207-64175912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               18, 48
               

               Conread position:
               131-410
               

               Cow position:
               chr5:72006944-72006664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               19, 74
               

               Conread position:
               134-337
               

               Cow position:
               chr5:42744701-42744907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 88
               

               Conread position:
               134-340
               

               Cow position:
               chr5:19813302-19813090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               15, 45
               

               Conread position:
               134-340
               

               Cow position:
               chr5:28927676-28927464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               15, 155
               

               Conread position:
               134-356
               

               Cow position:
               chr5:4032079-4031840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               134-356
               

               Cow position:
               chr5:67243842-67244064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               16, 42
               

               Conread position:
               134-357
               

               Cow position:
               chr5:41293994-41294228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               16, 104
               

               Conread position:
               134-363
               

               Cow position:
               chr5:2309643-2309403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               15, 103
               

               Conread position:
               134-375
               

               Cow position:
               chr5:60183714-60183979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               134-386
               

               Cow position:
               chr5:72564675-72564939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               15, 96
               

               Conread position:
               134-403
               

               Cow position:
               chr5:3771761-3772053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               15, 119
               

               Conread position:
               134-403
               

               Cow position:
               chr5:63964253-63963981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 89
               

               Conread position:
               134-410
               

               Cow position:
               chr5:21828779-21829082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               15, 89
               

               Conread position:
               134-410
               

               Cow position:
               chr5:44796818-44796518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               15, 91
               

               Conread position:
               135-333
               

               Cow position:
               chr5:67540289-67540078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               14, 100
               

               Conread position:
               135-344
               

               Cow position:
               chr5:51935106-51935323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               16, 80
               

               Conread position:
               135-349
               

               Cow position:
               chr5:35247195-35246971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               14, 90
               

               Conread position:
               135-350
               

               Cow position:
               chr5:20127970-20128192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               14, 89
               

               Conread position:
               135-356
               

               Cow position:
               chr5:44054121-44053908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               16, 44
               

               Conread position:
               135-375
               

               Cow position:
               chr5:14629899-14629642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               14, 227
               

               Conread position:
               135-406
               

               Cow position:
               chr5:49474631-49474340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               40, 16
               

               Conread position:
               135-409
               

               Cow position:
               chr5:48009935-48009664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 82
               

               Conread position:
               135-410
               

               Cow position:
               chr5:28224368-28224660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               211
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               14, 79
               

               Conread position:
               136-406
               

               Cow position:
               chr5:65941335-65941036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 83
               

               Conread position:
               137-355
               

               Cow position:
               chr5:44726410-44726189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               12, 42
               

               Conread position:
               137-367
               

               Cow position:
               chr5:62378707-62378937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               13, 62
               

               Conread position:
               138-350
               

               Cow position:
               chr5:56070773-56070999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               12, 75
               

               Conread position:
               139-300
               

               Cow position:
               chr5:29212862-29213028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               12, 89
               

               Conread position:
               139-333
               

               Cow position:
               chr5:23357253-23357452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               10, 75
               

               Conread position:
               139-340
               

               Cow position:
               chr5:46512845-46512639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               11, 69
               

               Conread position:
               139-343
               

               Cow position:
               chr5:14550663-14550451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               10, 77
               

               Conread position:
               139-344
               

               Cow position:
               chr5:60715440-60715234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               11, 83
               

               Conread position:
               139-344
               

               Cow position:
               chr5:62142589-62142810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               139-349
               

               Cow position:
               chr5:57737028-57737238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               12, 62
               

               Conread position:
               139-356
               

               Cow position:
               chr5:55019213-55019439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               10, 75
               

               Conread position:
               139-384
               

               Cow position:
               chr5:62638825-62639073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 85
               

               Conread position:
               139-385
               

               Cow position:
               chr5:26990310-26990569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               10, 75
               

               Conread position:
               139-385
               

               Cow position:
               chr5:36855123-36855384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               10, 83
               

               Conread position:
               139-406
               

               Cow position:
               chr5:23529362-23529088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               11, 78
               

               Conread position:
               139-407
               

               Cow position:
               chr5:37757908-37757650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               11, 40
               

               Conread position:
               139-409
               

               Cow position:
               chr5:39875043-39875322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               11, 58
               

               Conread position:
               139-409
               

               Cow position:
               chr5:71846002-71845709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               10, 94
               

               Conread position:
               139-410
               

               Cow position:
               chr5:29903600-29903325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               11, 84
               

               Conread position:
               140-404
               

               Cow position:
               chr5:37645993-37646287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               140-406
               

               Cow position:
               chr5:26262754-26262471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 73
               

               Conread position:
               141-363
               

               Cow position:
               chr5:59115307-59115532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 79
               

               Conread position:
               141-402
               

               Cow position:
               chr5:16214604-16214891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               9, 78
               

               Conread position:
               141-406
               

               Cow position:
               chr5:24175291-24175565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               9, 121
               

               Conread position:
               141-406
               

               Cow position:
               chr5:29515570-29515310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               13, 71
               

               Conread position:
               141-406
               

               Cow position:
               chr5:40237139-40237402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               29, 92
               

               Conread position:
               141-406
               

               Cow position:
               chr5:42782797-42782534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 73
               

               Conread position:
               142-349
               

               Cow position:
               chr5:16206234-16206016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               7, 122
               

               Conread position:
               142-350
               

               Cow position:
               chr5:18574095-18574313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               142-406
               

               Cow position:
               chr5:19752226-19752515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               7, 144
               

               Conread position:
               143-410
               

               Cow position:
               chr5:41165008-41165300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               6, 87
               

               Conread position:
               148-356
               

               Cow position:
               chr5:64140463-64140684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               148-406
               

               Cow position:
               chr5:30805096-30805363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               13, 69
               

               Conread position:
               149-326
               

               Cow position:
               chr5:55928870-55929060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               20, 72
               

               Conread position:
               150-363
               

               Cow position:
               chr5:67212286-67212513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               11, 197
               

               Conread position:
               156-410
               

               Cow position:
               chr5:40109429-40109702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               19, 71
               

               Conread position:
               157-350
               

               Cow position:
               chr5:59627031-59626832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               33, 67
               

               Conread position:
               157-356
               

               Cow position:
               chr5:63234883-63234682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               30, 101
               

               Conread position:
               157-379
               

               Cow position:
               chr5:63059012-63059229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 72
               

               Conread position:
               157-385
               

               Cow position:
               chr5:61455788-61456032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               159-355
               

               Cow position:
               chr5:37646601-37646399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 153
               

               Conread position:
               159-356
               

               Cow position:
               chr5:58555085-58555283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               50, 27
               

               Conread position:
               159-406
               

               Cow position:
               chr5:50943203-50942946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               7, 63
               

               Conread position:
               160-312
               

               Cow position:
               chr5:45148416-45148268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               29, 8
               

               Conread position:
               165-384
               

               Cow position:
               chr5:55796014-55795782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               22, 32
               

               Conread position:
               165-407
               

               Cow position:
               chr5:38717269-38717510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               107, 21
               

               Conread position:
               171-356
               

               Cow position:
               chr5:57156357-57156166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               16, 75
               

               Conread position:
               171-392
               

               Cow position:
               chr5:63627568-63627339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               41, 49
               

               Conread position:
               171-410
               

               Cow position:
               chr5:4280405-4280662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               16, 33
               

               Conread position:
               171-410
               

               Cow position:
               chr5:56153571-56153817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               19, 122
               

               Conread position:
               172-351
               

               Cow position:
               chr5:2851546-2851731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 103
               

               Conread position:
               173-398
               

               Cow position:
               chr5:71724259-71724492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               17, 133
               

               Conread position:
               175-349
               

               Cow position:
               chr5:11769230-11769408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 38
               

               Conread position:
               175-350
               

               Cow position:
               chr5:35982780-35982597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 58
               

               Conread position:
               175-359
               

               Cow position:
               chr5:27306264-27306452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               11, 26
               

               Conread position:
               175-410
               

               Cow position:
               chr5:57101565-57101308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               12, 165
               

               Conread position:
               178-409
               

               Cow position:
               chr5:50101414-50101161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               179-410
               

               Cow position:
               chr5:34914590-34914358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               8, 55
               

               Conread position:
               182-356
               

               Cow position:
               chr5:46322829-46322657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               5, 21
               

               Conread position:
               186-348
               

               Cow position:
               chr5:57230366-57230200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               28, 19
               

               Conread position:
               186-355
               

               Cow position:
               chr5:49501851-49501679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               86, 22
               

               Conread position:
               186-356
               

               Cow position:
               chr5:61875516-61875683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               24, 43
               

               Conread position:
               186-406
               

               Cow position:
               chr5:15470906-15471132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               160, 48
               

               Conread position:
               186-410
               

               Cow position:
               chr5:26549168-26548925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               34, 54
               

               Conread position:
               187-356
               

               Cow position:
               chr5:17602226-17602059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               80, 11
               

               Conread position:
               187-357
               

               Cow position:
               chr5:56517077-56517250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 33
               

               Conread position:
               187-364
               

               Cow position:
               chr5:41981345-41981522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               30, 24
               

               Conread position:
               187-385
               

               Cow position:
               chr5:57686766-57686552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               187-410
               

               Cow position:
               chr5:22795188-22795424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               188-405
               

               Cow position:
               chr5:63831903-63832129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               83, 29
               

               Conread position:
               189-365
               

               Cow position:
               chr5:33273667-33273847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               36, 161
               

               Conread position:
               189-396
               

               Cow position:
               chr5:49342074-49341861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 32
               

               Conread position:
               193-340
               

               Cow position:
               chr5:45574384-45574235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               79, 26
               

               Conread position:
               194-341
               

               Cow position:
               chr5:43844684-43844532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               196-390
               

               Cow position:
               chr5:56334525-56334324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               76, 33
               

               Conread position:
               198-406
               

               Cow position:
               chr5:48867478-48867256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               78, 21
               

               Conread position:
               202-406
               

               Cow position:
               chr5:59627086-59627306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               204-410
               

               Cow position:
               chr5:23527643-23527431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               21, 149
               

               Conread position:
               205-410
               

               Cow position:
               chr5:60523726-60523945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               35, 14
               

               Conread position:
               207-342
               

               Cow position:
               chr5:65679975-65679841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               65, 16
               

               Conread position:
               208-409
               

               Cow position:
               chr5:52852967-52853184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               68, 11
               

               Conread position:
               209-356
               

               Cow position:
               chr5:51490250-51490101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               59, 47
               

               Conread position:
               210-410
               

               Cow position:
               chr5:50824588-50824801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               211-354
               

               Cow position:
               chr5:55129342-55129487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               60, 12
               

               Conread position:
               221-410
               

               Cow position:
               chr5:17104860-17105063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               226-354
               

               Cow position:
               chr5:60948145-60948276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               226-391
               

               Cow position:
               chr5:69636236-69636405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               45, 144
               

               Conread position:
               226-404
               

               Cow position:
               chr5:7713784-7713960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               153, 5
               

               Conread position:
               227-350
               

               Cow position:
               chr5:12738542-12738419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               227-354
               

               Cow position:
               chr5:17384136-17384012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               227-355
               

               Cow position:
               chr5:26723461-26723592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               45, 81
               

               Conread position:
               227-356
               

               Cow position:
               chr5:9369258-9369125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               227-385
               

               Cow position:
               chr5:65050198-65050030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               227-405
               

               Cow position:
               chr5:6520024-6520219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               227-410
               

               Cow position:
               chr5:4267683-4267878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               45, 149
               

               Conread position:
               227-410
               

               Cow position:
               chr5:21531091-21530911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               43, 13
               

               Conread position:
               227-410
               

               Cow position:
               chr5:38631036-38631213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               136, 64
               

               Conread position:
               227-410
               

               Cow position:
               chr5:75228186-75227995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               228-350
               

               Cow position:
               chr5:56361810-56361933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               229-356
               

               Cow position:
               chr5:56428296-56428170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               48, 64
               

               Conread position:
               229-406
               

               Cow position:
               chr5:47743643-47743835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               43, 77
               

               Conread position:
               229-406
               

               Cow position:
               chr5:65552696-65552507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               46, 74
               

               Conread position:
               231-405
               

               Cow position:
               chr5:26253156-26252983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               36, 115
               

               Conread position:
               233-356
               

               Cow position:
               chr5:54436775-54436899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               41, 23
               

               Conread position:
               237-356
               

               Cow position:
               chr5:694887-695008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               238-410
               

               Cow position:
               chr5:21003338-21003517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 163
               

               Conread position:
               239-356
               

               Cow position:
               chr5:42623154-42623034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               239-356
               

               Cow position:
               chr5:51490577-51490456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               240-341
               

               Cow position:
               chr5:3677749-3677851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               84
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               240-406
               

               Cow position:
               chr5:36822913-36823083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               242-406
               

               Cow position:
               chr5:16668725-16668907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               243-410
               

               Cow position:
               chr5:34441751-34441582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               29, 106
               

               Conread position:
               245-410
               

               Cow position:
               chr5:19079283-19079461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 70
               

               Conread position:
               252-356
               

               Cow position:
               chr5:30235918-30236018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               252-398
               

               Cow position:
               chr5:51125971-51125812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               252-409
               

               Cow position:
               chr5:42049723-42049877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               24, 102
               

               Conread position:
               256-350
               

               Cow position:
               chr5:34116022-34116115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               80
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               257-385
               

               Cow position:
               chr5:3004996-3005118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               257-406
               

               Cow position:
               chr5:22387016-22386853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 92
               

               Conread position:
               262-362
               

               Cow position:
               chr5:14153719-14153817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               263-406
               

               Cow position:
               chr5:42752957-42753110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               266-410
               

               Cow position:
               chr5:29599490-29599334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               267-385
               

               Cow position:
               chr5:12478902-12478784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               5, 77
               

               Conread position:
               272-406
               

               Cow position:
               chr5:13097290-13097427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               112, 72
               

               Conread position:
               272-410
               

               Cow position:
               chr5:47353495-47353630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               114, 27
               

               Conread position:
               293-410
               

               Cow position:
               chr5:22898226-22898101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               293-410
               

               Cow position:
               chr5:29213244-29213364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               61, 42
               

               Conread position:
               296-410
               

               Cow position:
               chr5:22923505-22923622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               49, 0
               
Show alignments to all cow chromosomes.
Conread position:	60-349
Cow position:	chr5:16939737-16939455 (view UCSC Genome Browser custom track)
Alignm length:	297
Alignm identity:	205
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	9, 62
Conread position:	68-349
Cow position:	chr5:53710848-53710550 (view UCSC Genome Browser custom track)
Alignm length:	299
Alignm identity:	195
Alignm E-value:	8e-21
Alignm gaps (pig, cow):	8, 0
Conread position:	74-406
Cow position:	chr5:60210270-60209932 (view UCSC Genome Browser custom track)
Alignm length:	354
Alignm identity:	238
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	23, 6
Conread position:	80-406
Cow position:	chr5:35976378-35976708 (view UCSC Genome Browser custom track)
Alignm length:	337
Alignm identity:	235
Alignm E-value:	3.00018e-42
Alignm gaps (pig, cow):	39, 130
Conread position:	85-349
Cow position:	chr5:59873222-59872941 (view UCSC Genome Browser custom track)
Alignm length:	287
Alignm identity:	196
Alignm E-value:	9e-22
Alignm gaps (pig, cow):	64, 36
Conread position:	90-349
Cow position:	chr5:60747406-60747141 (view UCSC Genome Browser custom track)
Alignm length:	272
Alignm identity:	192
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	60, 9
Conread position:	93-410
Cow position:	chr5:38832996-38833332 (view UCSC Genome Browser custom track)
Alignm length:	339
Alignm identity:	224
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	16, 26
Conread position:	94-405
Cow position:	chr5:16893898-16893565 (view UCSC Genome Browser custom track)
Alignm length:	336
Alignm identity:	234
Alignm E-value:	4e-35
Alignm gaps (pig, cow):	12, 25
Conread position:	98-410
Cow position:	chr5:18898858-18899174 (view UCSC Genome Browser custom track)
Alignm length:	325
Alignm identity:	235
Alignm E-value:	2.99878e-43
Alignm gaps (pig, cow):	66, 20
Conread position:	100-410
Cow position:	chr5:46611218-46610899 (view UCSC Genome Browser custom track)
Alignm length:	326
Alignm identity:	212
Alignm E-value:	8e-21
Alignm gaps (pig, cow):	50, 34
Conread position:	103-406
Cow position:	chr5:11668302-11667970 (view UCSC Genome Browser custom track)
Alignm length:	337
Alignm identity:	237
Alignm E-value:	3e-32
Alignm gaps (pig, cow):	46, 15
Conread position:	105-356
Cow position:	chr5:30629272-30629011 (view UCSC Genome Browser custom track)
Alignm length:	267
Alignm identity:	182
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	46, 13
Conread position:	105-409
Cow position:	chr5:6528568-6528881 (view UCSC Genome Browser custom track)
Alignm length:	321
Alignm identity:	224
Alignm E-value:	1e-34
Alignm gaps (pig, cow):	44, 13
Conread position:	105-410
Cow position:	chr5:30487122-30487445 (view UCSC Genome Browser custom track)
Alignm length:	327
Alignm identity:	214
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	44, 13
Conread position:	107-405
Cow position:	chr5:33833928-33834253 (view UCSC Genome Browser custom track)
Alignm length:	332
Alignm identity:	233
Alignm E-value:	5e-27
Alignm gaps (pig, cow):	10, 102
Conread position:	112-356
Cow position:	chr5:49685379-49685131 (view UCSC Genome Browser custom track)
Alignm length:	258
Alignm identity:	185
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	37, 107
Conread position:	114-384
Cow position:	chr5:4617262-4617534 (view UCSC Genome Browser custom track)
Alignm length:	280
Alignm identity:	189
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	35, 132
Conread position:	114-385
Cow position:	chr5:35785082-35784817 (view UCSC Genome Browser custom track)
Alignm length:	275
Alignm identity:	200
Alignm E-value:	7e-40
Alignm gaps (pig, cow):	36, 57
Conread position:	115-406
Cow position:	chr5:43402792-43403123 (view UCSC Genome Browser custom track)
Alignm length:	332
Alignm identity:	231
Alignm E-value:	4e-25
Alignm gaps (pig, cow):	15, 0
Conread position:	117-356
Cow position:	chr5:30253636-30253887 (view UCSC Genome Browser custom track)
Alignm length:	254
Alignm identity:	181
Alignm E-value:	7e-30
Alignm gaps (pig, cow):	13, 104