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Cow genome map

           
Conread name:
           
rcsp04b_a24.y1
        

               
Conread position:
               
1-133
               

               
Cow position:
               
chr16:5396660-5396785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr16:53451860-53451722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr16:7912284-7912138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr16:12324610-12324431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr16:1582770-1582955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr16:15945096-15945287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr16:56243732-56243936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr16:31880596-31880824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 135
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr16:17134905-17135145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
201, 19
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr16:30036395-30036146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 57
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr16:8461924-8462188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr16:7076076-7075791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 39
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr16:9905252-9904968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr16:45122198-45121915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
46, 52
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr16:30662111-30662385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr16:8738223-8737935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr16:8958899-8959189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
163, 39
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr16:4059522-4059221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
46, 86
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr16:40446424-40446115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
69, 44
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr16:41578382-41578088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr16:591648-591952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 61
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr16:39474000-39474277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr16:48956954-48956655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
168, 21
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr16:54579321-54579030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr16:820407-820106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
281, 43
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr16:3047187-3047483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
188, 21
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr16:3304192-3303890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr16:4275587-4275883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
188, 21
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr16:7418532-7418242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 39
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr16:10592599-10592293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr16:15824286-15824586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
122, 29
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr16:17746001-17745693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
48, 80
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr16:32781528-32781224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 49
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr16:33198274-33198576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 147
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr16:33226382-33226680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 23
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr16:38905068-38905371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
50, 200
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr16:42633579-42633897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
29, 18
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr16:45610144-45609849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr16:45678134-45677845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr16:47820730-47820432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 33
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr16:48006338-48006629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
200, 26
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr16:54679819-54679527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr16:35758360-35758063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
2-177
               

               
Cow position:
               
chr16:24142795-24142971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
49, 122
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr16:7812848-7812669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
2-216
               

               
Cow position:
               
chr16:15953658-15953872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
30, 16
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr16:424654-424920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr16:13578700-13578969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr16:19047276-19047548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr16:34753798-34754077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 51
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr16:54734404-54734129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
21, 90
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr16:53089178-53089463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
38, 146
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr16:11083151-11082885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
2-291
               

               
Cow position:
               
chr16:10032796-10032516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr16:2417431-2417718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr16:7152015-7152301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
55, 20
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr16:33267876-33267587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
71, 43
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr16:2223239-2223534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
185, 30
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr16:4856944-4857228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 42
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr16:21451005-21450710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
279, 40
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr16:56522318-56522608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
258, 40
               

               
Conread position:
               
2-305
               

               
Cow position:
               
chr16:9933315-9933020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 25
               

               
Conread position:
               
2-305
               

               
Cow position:
               
chr16:39682944-39683248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
125, 43
               

               
Conread position:
               
2-305
               

               
Cow position:
               
chr16:50289306-50289011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 22
               

               
Conread position:
               
2-306
               

               
Cow position:
               
chr16:9497109-9497418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
106, 25
               

               
Conread position:
               
2-306
               

               
Cow position:
               
chr16:12274226-12273928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
283, 25
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr16:7441945-7442243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
272, 40
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr16:42444315-42444015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
230, 47
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr16:4910367-4910673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
279, 25
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr16:7456301-7456602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 82
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr16:7665795-7665493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
278, 43
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr16:8841048-8840751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
148, 38
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr16:12320378-12320080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr16:13306716-13307005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr16:15960124-15960433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr16:20205619-20205314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
193, 40
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr16:29038072-29037762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
191, 22
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr16:31348602-31348909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 113
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr16:38243505-38243804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
278, 42
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr16:45139819-45139530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr16:49229615-49229913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
192, 20
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr16:53553561-53553855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
167, 40
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr16:37117230-37116926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
281, 23
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr16:5896575-5896272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
189, 38
               

               
Conread position:
               
3-306
               

               
Cow position:
               
chr16:22850482-22850188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
195, 20
               

               
Conread position:
               
3-306
               

               
Cow position:
               
chr16:56082208-56082503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
299, 24
               

               
Conread position:
               
4-236
               

               
Cow position:
               
chr16:44239579-44239334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
4-279
               

               
Cow position:
               
chr16:33869594-33869873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
47, 187
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr16:13969207-13969490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
72, 78
               

               
Conread position:
               
4-302
               

               
Cow position:
               
chr16:23955675-23955962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
276, 20
               

               
Conread position:
               
4-306
               

               
Cow position:
               
chr16:22841894-22842199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr16:8522234-8522537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 38
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr16:17143091-17142794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
148, 45
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr16:26649471-26649771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr16:29557471-29557769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr16:46433172-46433469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 20
               

               
Conread position:
               
4-311
               

               
Cow position:
               
chr16:14106797-14106501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
5-155
               

               
Cow position:
               
chr16:16025596-16025446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-307
               

               
Cow position:
               
chr16:9985243-9985527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
184, 17
               

               
Conread position:
               
8-198
               

               
Cow position:
               
chr16:21370036-21370220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
8-300
               

               
Cow position:
               
chr16:29380406-29380120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
36, 43
               

               
Conread position:
               
8-308
               

               
Cow position:
               
chr16:16552715-16552420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
195, 34
               

               
Conread position:
               
8-308
               

               
Cow position:
               
chr16:34153419-34153716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
277, 15
               

               
Conread position:
               
8-308
               

               
Cow position:
               
chr16:48398108-48398394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 18
               

               
Conread position:
               
9-308
               

               
Cow position:
               
chr16:43276178-43275880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 145
               

               
Conread position:
               
12-289
               

               
Cow position:
               
chr16:33054327-33054607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
13-307
               

               
Cow position:
               
chr16:8239719-8240006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
182, 42
               

               
Conread position:
               
16-246
               

               
Cow position:
               
chr16:40700587-40700808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
38, 70
               

               
Conread position:
               
16-308
               

               
Cow position:
               
chr16:20025588-20025305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
16-308
               

               
Cow position:
               
chr16:24826223-24825930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
16-308
               

               
Cow position:
               
chr16:39616870-39616601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
16-313
               

               
Cow position:
               
chr16:18679335-18679050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 80
               

               
Conread position:
               
19-274
               

               
Cow position:
               
chr16:43675023-43674767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
19, 135
               

               
Conread position:
               
19-283
               

               
Cow position:
               
chr16:8933281-8933540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
39, 115
               

               
Conread position:
               
22-199
               

               
Cow position:
               
chr16:17460307-17460133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
130, 47
               

               
Conread position:
               
22-257
               

               
Cow position:
               
chr16:12501017-12501252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
22-308
               

               
Cow position:
               
chr16:41696948-41697229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 171
               

               
Conread position:
               
24-308
               

               
Cow position:
               
chr16:14242509-14242230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
25-306
               

               
Cow position:
               
chr16:53830453-53830725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
25-308
               

               
Cow position:
               
chr16:54342123-54341846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
71, 38
               

               
Conread position:
               
26-308
               

               
Cow position:
               
chr16:10504966-10504693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 85
               

               
Conread position:
               
27-274
               

               
Cow position:
               
chr16:4399875-4399629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 117
               

               
Conread position:
               
27-275
               

               
Cow position:
               
chr16:56796531-56796774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
27-283
               

               
Cow position:
               
chr16:18052469-18052214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
22, 54
               

               
Conread position:
               
27-308
               

               
Cow position:
               
chr16:5636721-5636447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
175, 28
               

               
Conread position:
               
27-308
               

               
Cow position:
               
chr16:14568353-14568623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
28-249
               

               
Cow position:
               
chr16:53792685-53792901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
106, 21
               

               
Conread position:
               
28-283
               

               
Cow position:
               
chr16:47855076-47854827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
28-306
               

               
Cow position:
               
chr16:29608647-29608379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
30, 123
               

               
Conread position:
               
29-148
               

               
Cow position:
               
chr16:19478631-19478748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
29-171
               

               
Cow position:
               
chr16:34204931-34205070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
29-230
               

               
Cow position:
               
chr16:45294682-45294479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
29-233
               

               
Cow position:
               
chr16:31561888-31561685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
154, 23
               

               
Conread position:
               
29-236
               

               
Cow position:
               
chr16:31149509-31149320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
29-274
               

               
Cow position:
               
chr16:16597693-16597452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
243, 156
               

               
Conread position:
               
29-298
               

               
Cow position:
               
chr16:25170527-25170257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
67, 31
               

               
Conread position:
               
29-300
               

               
Cow position:
               
chr16:13698652-13698378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
20, 52
               

               
Conread position:
               
29-308
               

               
Cow position:
               
chr16:238402-238124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
171, 29
               

               
Conread position:
               
29-308
               

               
Cow position:
               
chr16:11957444-11957726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
158, 23
               

               
Conread position:
               
29-308
               

               
Cow position:
               
chr16:19408391-19408658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
22, 159
               

               
Conread position:
               
29-308
               

               
Cow position:
               
chr16:38708702-38708972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 23
               

               
Conread position:
               
29-308
               

               
Cow position:
               
chr16:43308426-43308707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
29-308
               

               
Cow position:
               
chr16:43800780-43801061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
29-308
               

               
Cow position:
               
chr16:49169244-49169527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
29-308
               

               
Cow position:
               
chr16:51501062-51500792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
30-308
               

               
Cow position:
               
chr16:13611319-13611593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
30-308
               

               
Cow position:
               
chr16:35623115-35623383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
32-306
               

               
Cow position:
               
chr16:25387105-25386841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 20
               

               
Conread position:
               
32-308
               

               
Cow position:
               
chr16:52170185-52169924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
33-243
               

               
Cow position:
               
chr16:9553188-9552984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
33-306
               

               
Cow position:
               
chr16:46552926-46552671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
34-204
               

               
Cow position:
               
chr16:33235034-33235200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
34-260
               

               
Cow position:
               
chr16:32807161-32807386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
25, 72
               

               
Conread position:
               
34-308
               

               
Cow position:
               
chr16:8811966-8812224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
34-308
               

               
Cow position:
               
chr16:33646146-33645873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 196
               

               
Conread position:
               
34-308
               

               
Cow position:
               
chr16:33704934-33704665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
36-257
               

               
Cow position:
               
chr16:34220314-34220093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
11, 17
               

               
Conread position:
               
36-308
               

               
Cow position:
               
chr16:11422426-11422169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
36-308
               

               
Cow position:
               
chr16:11806802-11806534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
22, 192
               

               
Conread position:
               
36-308
               

               
Cow position:
               
chr16:22380224-22380497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 84
               

               
Conread position:
               
36-308
               

               
Cow position:
               
chr16:42078721-42078982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
36-310
               

               
Cow position:
               
chr16:51869764-51869496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
242, 6
               

               
Conread position:
               
37-248
               

               
Cow position:
               
chr16:16933246-16933037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
107, 21
               

               
Conread position:
               
37-280
               

               
Cow position:
               
chr16:11940162-11939928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
37-308
               

               
Cow position:
               
chr16:20069960-20069686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
37-308
               

               
Cow position:
               
chr16:27261825-27262092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
25, 15
               

               
Conread position:
               
38-283
               

               
Cow position:
               
chr16:22984881-22984641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
20, 96
               

               
Conread position:
               
38-307
               

               
Cow position:
               
chr16:48095638-48095902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
139, 155
               

               
Conread position:
               
38-308
               

               
Cow position:
               
chr16:13689794-13689523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
38-308
               

               
Cow position:
               
chr16:37452486-37452760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
38-308
               

               
Cow position:
               
chr16:48145275-48145549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 42
               

               
Conread position:
               
38-315
               

               
Cow position:
               
chr16:47852467-47852738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
180, 40
               

               
Conread position:
               
39-306
               

               
Cow position:
               
chr16:17289073-17288801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 165
               

               
Conread position:
               
39-306
               

               
Cow position:
               
chr16:48494431-48494693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
40-300
               

               
Cow position:
               
chr16:47518972-47518704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
42-268
               

               
Cow position:
               
chr16:21040150-21039926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
158, 188
               

               
Conread position:
               
42-273
               

               
Cow position:
               
chr16:40514362-40514587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
42-292
               

               
Cow position:
               
chr16:40333206-40333454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
158, 10
               

               
Conread position:
               
42-305
               

               
Cow position:
               
chr16:31078971-31079236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
164, 10
               

               
Conread position:
               
42-306
               

               
Cow position:
               
chr16:17945643-17945382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
42-308
               

               
Cow position:
               
chr16:48340574-48340837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 10
               

               
Conread position:
               
42-308
               

               
Cow position:
               
chr16:49126065-49126327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
59, 17
               

               
Conread position:
               
43-283
               

               
Cow position:
               
chr16:55233803-55233578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
44-241
               

               
Cow position:
               
chr16:8530761-8530959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
44-248
               

               
Cow position:
               
chr16:42241168-42240968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
128, 100
               

               
Conread position:
               
44-283
               

               
Cow position:
               
chr16:48086748-48086984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
13, 47
               

               
Conread position:
               
44-308
               

               
Cow position:
               
chr16:13195220-13195483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
154, 16
               

               
Conread position:
               
44-308
               

               
Cow position:
               
chr16:30715625-30715354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
139, 198
               

               
Conread position:
               
45-236
               

               
Cow position:
               
chr16:42432992-42433185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
45-271
               

               
Cow position:
               
chr16:6344323-6344547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
149, 14
               

               
Conread position:
               
45-288
               

               
Cow position:
               
chr16:21761849-21762093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 141
               

               
Conread position:
               
45-299
               

               
Cow position:
               
chr16:29766444-29766204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
51, 15
               

               
Conread position:
               
45-308
               

               
Cow position:
               
chr16:18757719-18757982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
157, 109
               

               
Conread position:
               
46-308
               

               
Cow position:
               
chr16:20476652-20476394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
46-308
               

               
Cow position:
               
chr16:42733894-42734155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
157, 17
               

               
Conread position:
               
48-273
               

               
Cow position:
               
chr16:29677519-29677737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
25, 15
               

               
Conread position:
               
48-296
               

               
Cow position:
               
chr16:44584323-44584567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
197, 10
               

               
Conread position:
               
48-305
               

               
Cow position:
               
chr16:24702965-24702713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
48-307
               

               
Cow position:
               
chr16:29159235-29158989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
232, 15
               

               
Conread position:
               
48-308
               

               
Cow position:
               
chr16:23472865-23472605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
234, 20
               

               
Conread position:
               
48-308
               

               
Cow position:
               
chr16:26676571-26676831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
147, 15
               

               
Conread position:
               
49-304
               

               
Cow position:
               
chr16:42340312-42340058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
231, 143
               

               
Conread position:
               
49-306
               

               
Cow position:
               
chr16:18206075-18205821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
49-308
               

               
Cow position:
               
chr16:4626276-4626533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
49-308
               

               
Cow position:
               
chr16:10773237-10772991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 39
               

               
Conread position:
               
49-308
               

               
Cow position:
               
chr16:30036875-30037133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
156, 97
               

               
Conread position:
               
49-308
               

               
Cow position:
               
chr16:45813582-45813843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 82
               

               
Conread position:
               
49-308
               

               
Cow position:
               
chr16:48385287-48385542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
49-308
               

               
Cow position:
               
chr16:52133401-52133657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
239, 148
               

               
Conread position:
               
49-308
               

               
Cow position:
               
chr16:56565712-56565454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
99, 85
               

               
Conread position:
               
49-313
               

               
Cow position:
               
chr16:20633760-20634025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 112
               

               
Conread position:
               
50-297
               

               
Cow position:
               
chr16:36120868-36121111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
232, 140
               

               
Conread position:
               
50-308
               

               
Cow position:
               
chr16:45676747-45676994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 106
               

               
Conread position:
               
52-194
               

               
Cow position:
               
chr16:32893741-32893599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
52-213
               

               
Cow position:
               
chr16:12010208-12010047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
52-226
               

               
Cow position:
               
chr16:45785850-45785675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
52-228
               

               
Cow position:
               
chr16:22919580-22919405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
52-245
               

               
Cow position:
               
chr16:30305701-30305893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 79
               

               
Conread position:
               
52-252
               

               
Cow position:
               
chr16:33135050-33134856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
52-259
               

               
Cow position:
               
chr16:48545934-48545728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
23, 33
               

               
Conread position:
               
52-269
               

               
Cow position:
               
chr16:3114652-3114434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
203, 0
               

               
Conread position:
               
52-274
               

               
Cow position:
               
chr16:10945328-10945538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
52-280
               

               
Cow position:
               
chr16:50667403-50667172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
133, 7
               

               
Conread position:
               
52-283
               

               
Cow position:
               
chr16:17903533-17903766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
148, 7
               

               
Conread position:
               
52-283
               

               
Cow position:
               
chr16:51697198-51696966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
112, 170
               

               
Conread position:
               
52-283
               

               
Cow position:
               
chr16:53508872-53509099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
52-283
               

               
Cow position:
               
chr16:54226487-54226715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
52-297
               

               
Cow position:
               
chr16:21317480-21317725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
144, 180
               

               
Conread position:
               
52-301
               

               
Cow position:
               
chr16:44210446-44210700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
52-301
               

               
Cow position:
               
chr16:54709927-54710168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
106, 39
               

               
Conread position:
               
52-304
               

               
Cow position:
               
chr16:5364014-5363758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
52-304
               

               
Cow position:
               
chr16:50282319-50282563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 139
               

               
Conread position:
               
52-305
               

               
Cow position:
               
chr16:31117502-31117752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr16:7499163-7498921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr16:7505197-7504948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr16:12633997-12633746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
111, 102
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr16:15809091-15808835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
79, 109
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr16:22808445-22808692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
103, 141
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr16:25380382-25380636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
104, 141
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr16:38621068-38620822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
19, 49
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr16:51598500-51598745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
52-307
               

               
Cow position:
               
chr16:3634228-3633972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
128, 7
               

               
Conread position:
               
52-307
               

               
Cow position:
               
chr16:24855653-24855401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
52-307
               

               
Cow position:
               
chr16:47964706-47964956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr16:5257109-5256858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
152, 201
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr16:5836698-5836441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
92, 218
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr16:8068711-8068960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
139, 73
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr16:9973386-9973640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
116, 126
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr16:11774933-11775192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
17, 152
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr16:11791123-11790875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr16:14685277-14685531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
46, 143
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr16:19003420-19003658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr16:19644001-19643747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr16:25839733-25839477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr16:27723337-27723071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
137, 123
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr16:32969968-32970220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
144, 20
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr16:35297190-35296931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 200
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr16:43505698-43505940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr16:48493293-48493037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr16:53086229-53086471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
146, 7
               

               
Conread position:
               
52-310
               

               
Cow position:
               
chr16:29655438-29655185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
225, 144
               

               
Conread position:
               
52-313
               

               
Cow position:
               
chr16:14754210-14754469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
75, 142
               

               
Conread position:
               
52-313
               

               
Cow position:
               
chr16:42242005-42242263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
224, 53
               

               
Conread position:
               
52-315
               

               
Cow position:
               
chr16:40562344-40562082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
53-258
               

               
Cow position:
               
chr16:18141216-18141420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
146, 16
               

               
Conread position:
               
54-269
               

               
Cow position:
               
chr16:42176756-42176541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
142, 17
               

               
Conread position:
               
54-274
               

               
Cow position:
               
chr16:16571024-16570807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
8, 77
               

               
Conread position:
               
54-283
               

               
Cow position:
               
chr16:33595824-33596050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
17, 137
               

               
Conread position:
               
54-304
               

               
Cow position:
               
chr16:8366720-8366958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
54-305
               

               
Cow position:
               
chr16:8315083-8315323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
54-308
               

               
Cow position:
               
chr16:56231938-56231685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
54-313
               

               
Cow position:
               
chr16:11008458-11008198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
35, 15
               

               
Conread position:
               
55-251
               

               
Cow position:
               
chr16:7980899-7980707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
190, 89
               

               
Conread position:
               
55-290
               

               
Cow position:
               
chr16:39401906-39402122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
56-254
               

               
Cow position:
               
chr16:27701152-27701340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
57-283
               

               
Cow position:
               
chr16:25965609-25965387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
6, 91
               

               
Conread position:
               
57-296
               

               
Cow position:
               
chr16:45554551-45554313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
88, 151
               

               
Conread position:
               
57-297
               

               
Cow position:
               
chr16:17282766-17282534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
57-298
               

               
Cow position:
               
chr16:23729809-23730057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 245
               

               
Conread position:
               
57-298
               

               
Cow position:
               
chr16:45731284-45731517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
237, 24
               

               
Conread position:
               
57-308
               

               
Cow position:
               
chr16:11105660-11105411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
57-308
               

               
Cow position:
               
chr16:52275021-52275272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
57-308
               

               
Cow position:
               
chr16:53627320-53627569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
58-289
               

               
Cow position:
               
chr16:27659639-27659866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
84, 148
               

               
Conread position:
               
58-297
               

               
Cow position:
               
chr16:48146552-48146788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
30, 137
               

               
Conread position:
               
58-308
               

               
Cow position:
               
chr16:12360866-12361118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
58-308
               

               
Cow position:
               
chr16:13990082-13989840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
190, 134
               

               
Conread position:
               
59-177
               

               
Cow position:
               
chr16:22824728-22824846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
59-272
               

               
Cow position:
               
chr16:27160758-27160971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
59-283
               

               
Cow position:
               
chr16:10148388-10148164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
59-283
               

               
Cow position:
               
chr16:54664693-54664916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 21
               

               
Conread position:
               
59-290
               

               
Cow position:
               
chr16:7429485-7429254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
59-305
               

               
Cow position:
               
chr16:15370792-15370540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
95, 135
               

               
Conread position:
               
59-308
               

               
Cow position:
               
chr16:3246099-3246348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
9, 13
               

               
Conread position:
               
59-308
               

               
Cow position:
               
chr16:8448549-8448786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
59-308
               

               
Cow position:
               
chr16:11102715-11102966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
59-308
               

               
Cow position:
               
chr16:18402792-18402543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
148, 28
               

               
Conread position:
               
59-308
               

               
Cow position:
               
chr16:35188355-35188112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
225, 38
               

               
Conread position:
               
59-308
               

               
Cow position:
               
chr16:38119344-38119586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
221, 133
               

               
Conread position:
               
59-308
               

               
Cow position:
               
chr16:43105410-43105655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
222, 56
               

               
Conread position:
               
60-233
               

               
Cow position:
               
chr16:11134876-11135049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
143, 132
               

               
Conread position:
               
60-238
               

               
Cow position:
               
chr16:496271-496447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
60-272
               

               
Cow position:
               
chr16:10162921-10162712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
60-297
               

               
Cow position:
               
chr16:36203514-36203748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
60-306
               

               
Cow position:
               
chr16:8076397-8076648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
60-308
               

               
Cow position:
               
chr16:4902695-4902447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
16, 137
               

               
Conread position:
               
60-308
               

               
Cow position:
               
chr16:6319308-6319056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
60-308
               

               
Cow position:
               
chr16:12060521-12060275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
60-308
               

               
Cow position:
               
chr16:42345508-42345745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
60-308
               

               
Cow position:
               
chr16:52834783-52835025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
61-306
               

               
Cow position:
               
chr16:42092271-42092523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
61-315
               

               
Cow position:
               
chr16:23738285-23738030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
137, 164
               

               
Conread position:
               
62-301
               

               
Cow position:
               
chr16:50873064-50873299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
27, 142
               

               
Conread position:
               
62-306
               

               
Cow position:
               
chr16:42752952-42752715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
218, 16
               

               
Conread position:
               
62-308
               

               
Cow position:
               
chr16:14758838-14758590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
142, 68
               

               
Conread position:
               
63-245
               

               
Cow position:
               
chr16:50370696-50370517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
63-301
               

               
Cow position:
               
chr16:570818-571048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
63-306
               

               
Cow position:
               
chr16:16096838-16096596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
135, 73
               

               
Conread position:
               
63-308
               

               
Cow position:
               
chr16:52889310-52889550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
64-283
               

               
Cow position:
               
chr16:22207179-22206959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
119, 49
               

               
Conread position:
               
64-308
               

               
Cow position:
               
chr16:8322881-8323124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
64-308
               

               
Cow position:
               
chr16:17627031-17626788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 137
               

               
Conread position:
               
65-262
               

               
Cow position:
               
chr16:30369446-30369256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
65-308
               

               
Cow position:
               
chr16:4698888-4699122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
66-308
               

               
Cow position:
               
chr16:52790153-52789917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
132, 39
               

               
Conread position:
               
67-313
               

               
Cow position:
               
chr16:23483379-23483145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
209, 11
               

               
Conread position:
               
68-273
               

               
Cow position:
               
chr16:601041-600845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
68-288
               

               
Cow position:
               
chr16:46807444-46807653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
68-308
               

               
Cow position:
               
chr16:10352980-10352729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
69-305
               

               
Cow position:
               
chr16:48369856-48370086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
72-296
               

               
Cow position:
               
chr16:31122157-31122375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
118, 92
               

               
Conread position:
               
72-308
               

               
Cow position:
               
chr16:39394662-39394435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
73-308
               

               
Cow position:
               
chr16:6887358-6887587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
73-308
               

               
Cow position:
               
chr16:50417605-50417825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
74-306
               

               
Cow position:
               
chr16:28833933-28833699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
123, 5
               

               
Conread position:
               
74-306
               

               
Cow position:
               
chr16:42217600-42217826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
211, 5
               

               
Conread position:
               
75-198
               

               
Cow position:
               
chr16:19815157-19815280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
77-297
               

               
Cow position:
               
chr16:7077655-7077874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
147, 113
               

               
Conread position:
               
77-308
               

               
Cow position:
               
chr16:30143111-30143351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 130
               

               
Conread position:
               
78-252
               

               
Cow position:
               
chr16:29527916-29527739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
114, 170
               

               
Conread position:
               
78-308
               

               
Cow position:
               
chr16:39513989-39514217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
82, 40
               

               
Conread position:
               
78-308
               

               
Cow position:
               
chr16:47643501-47643275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
83-308
               

               
Cow position:
               
chr16:3614822-3614605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
84-249
               

               
Cow position:
               
chr16:44428964-44428797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
84-308
               

               
Cow position:
               
chr16:4971946-4972163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
197, 106
               

               
Conread position:
               
86-308
               

               
Cow position:
               
chr16:32327737-32327510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
110, 139
               

               
Conread position:
               
86-308
               

               
Cow position:
               
chr16:46627762-46627976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
109, 73
               

               
Conread position:
               
86-308
               

               
Cow position:
               
chr16:53891707-53891923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
147, 72
               

               
Conread position:
               
87-271
               

               
Cow position:
               
chr16:30186723-30186539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
87-289
               

               
Cow position:
               
chr16:35937415-35937215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
87-308
               

               
Cow position:
               
chr16:50521556-50521336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 106
               

               
Conread position:
               
89-252
               

               
Cow position:
               
chr16:21381489-21381647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
89-307
               

               
Cow position:
               
chr16:16402251-16402464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
154, 48
               

               
Conread position:
               
89-308
               

               
Cow position:
               
chr16:3821604-3821395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
192, 65
               

               
Conread position:
               
89-308
               

               
Cow position:
               
chr16:35195537-35195747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
192, 101
               

               
Conread position:
               
89-308
               

               
Cow position:
               
chr16:54084112-54083893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
195, 107
               

               
Conread position:
               
90-272
               

               
Cow position:
               
chr16:31163052-31163232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
91-274
               

               
Cow position:
               
chr16:33130536-33130350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
91-288
               

               
Cow position:
               
chr16:38020182-38019991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
91-321
               

               
Cow position:
               
chr16:45645614-45645839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
61, 33
               

               
Conread position:
               
95-297
               

               
Cow position:
               
chr16:7583467-7583266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
181, 100
               

               
Conread position:
               
95-306
               

               
Cow position:
               
chr16:8279722-8279926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
98, 37
               

               
Conread position:
               
95-306
               

               
Cow position:
               
chr16:16548683-16548470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
95-306
               

               
Cow position:
               
chr16:49336293-49336088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
185, 35
               

               
Conread position:
               
95-307
               

               
Cow position:
               
chr16:13752062-13752265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
95-308
               

               
Cow position:
               
chr16:9136238-9136034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
95, 46
               

               
Conread position:
               
95-308
               

               
Cow position:
               
chr16:39646615-39646407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
186, 95
               

               
Conread position:
               
95-308
               

               
Cow position:
               
chr16:41752507-41752714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
114, 35
               

               
Conread position:
               
95-313
               

               
Cow position:
               
chr16:46752201-46752417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
96-306
               

               
Cow position:
               
chr16:22860700-22860900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
111, 91
               

               
Conread position:
               
96-308
               

               
Cow position:
               
chr16:43661519-43661303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
93, 144
               

               
Conread position:
               
97-305
               

               
Cow position:
               
chr16:47097940-47098142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
97-308
               

               
Cow position:
               
chr16:13232881-13233090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
100-241
               

               
Cow position:
               
chr16:11094762-11094905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
100-245
               

               
Cow position:
               
chr16:8018033-8017889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 90
               

               
Conread position:
               
100-249
               

               
Cow position:
               
chr16:15981329-15981479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
100-254
               

               
Cow position:
               
chr16:13496107-13495951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
100-265
               

               
Cow position:
               
chr16:4970950-4970785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
99, 92
               

               
Conread position:
               
100-279
               

               
Cow position:
               
chr16:44744068-44744246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
100-283
               

               
Cow position:
               
chr16:27020136-27019958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
100-286
               

               
Cow position:
               
chr16:53813588-53813773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
65, 54
               

               
Conread position:
               
100-296
               

               
Cow position:
               
chr16:18037014-18036819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
17, 103
               

               
Conread position:
               
100-300
               

               
Cow position:
               
chr16:594159-594363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
100-306
               

               
Cow position:
               
chr16:49125468-49125668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
100-306
               

               
Cow position:
               
chr16:51710072-51710268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
99, 44
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr16:14361168-14360962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
181, 90
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr16:31269205-31268999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
88, 131
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr16:35343408-35343614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
181, 92
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr16:37380335-37380125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr16:53048617-53048413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
110, 90
               

               
Conread position:
               
100-311
               

               
Cow position:
               
chr16:4981312-4981527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
100-313
               

               
Cow position:
               
chr16:26610704-26610491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
183, 90
               

               
Conread position:
               
100-313
               

               
Cow position:
               
chr16:31978121-31978334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
183, 90
               

               
Conread position:
               
101-250
               

               
Cow position:
               
chr16:22123906-22124050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
101-308
               

               
Cow position:
               
chr16:24672294-24672499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
179, 33
               

               
Conread position:
               
101-308
               

               
Cow position:
               
chr16:56787712-56787920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
180, 108
               

               
Conread position:
               
101-311
               

               
Cow position:
               
chr16:38191537-38191327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
79, 108
               

               
Conread position:
               
101-313
               

               
Cow position:
               
chr16:10650824-10651037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
103-273
               

               
Cow position:
               
chr16:1725012-1725184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 29
               

               
Conread position:
               
103-297
               

               
Cow position:
               
chr16:45753394-45753581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
104-306
               

               
Cow position:
               
chr16:28692667-28692860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
176, 31
               

               
Conread position:
               
104-308
               

               
Cow position:
               
chr16:16265040-16265241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
50, 43
               

               
Conread position:
               
104-308
               

               
Cow position:
               
chr16:45047573-45047771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
106-305
               

               
Cow position:
               
chr16:11568064-11568256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
94, 27
               

               
Conread position:
               
106-308
               

               
Cow position:
               
chr16:14699977-14699777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
169, 24
               

               
Conread position:
               
106-308
               

               
Cow position:
               
chr16:19756735-19756937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
96, 46
               

               
Conread position:
               
106-308
               

               
Cow position:
               
chr16:39238005-39237805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
108-249
               

               
Cow position:
               
chr16:35477358-35477499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
94, 76
               

               
Conread position:
               
109-289
               

               
Cow position:
               
chr16:30515533-30515714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
79, 110
               

               
Conread position:
               
109-308
               

               
Cow position:
               
chr16:45535231-45535038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
179, 12
               

               
Conread position:
               
109-316
               

               
Cow position:
               
chr16:47245645-47245434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
100, 87
               

               
Conread position:
               
110-312
               

               
Cow position:
               
chr16:54287920-54287725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
111-306
               

               
Cow position:
               
chr16:21905216-21905026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
111-308
               

               
Cow position:
               
chr16:28192124-28191928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
132, 99
               

               
Conread position:
               
111-308
               

               
Cow position:
               
chr16:42778018-42777825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
111-308
               

               
Cow position:
               
chr16:53037582-53037765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
114-308
               

               
Cow position:
               
chr16:4145114-4144922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
163, 39
               

               
Conread position:
               
114-308
               

               
Cow position:
               
chr16:49404108-49404293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
116-300
               

               
Cow position:
               
chr16:26702865-26703052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
96, 133
               

               
Conread position:
               
128-313
               

               
Cow position:
               
chr16:4372456-4372641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
152, 126
               

               
Conread position:
               
131-282
               

               
Cow position:
               
chr16:30614947-30615095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
133-308
               

               
Cow position:
               
chr16:24148193-24148016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
137-308
               

               
Cow position:
               
chr16:22868150-22868317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
143, 63
               

               
Conread position:
               
137-308
               

               
Cow position:
               
chr16:56912685-56912859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
138-313
               

               
Cow position:
               
chr16:13791544-13791370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
150, 100
               

               
Conread position:
               
148-307
               

               
Cow position:
               
chr16:39417103-39417258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
149-308
               

               
Cow position:
               
chr16:44973510-44973353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
131, 43
               

               
Conread position:
               
151-306
               

               
Cow position:
               
chr16:35168744-35168589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 89
               

               
Conread position:
               
154-308
               

               
Cow position:
               
chr16:47620390-47620239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
155-297
               

               
Cow position:
               
chr16:26068942-26068801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
155-308
               

               
Cow position:
               
chr16:4103152-4103300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
156-306
               

               
Cow position:
               
chr16:14028620-14028766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
156-308
               

               
Cow position:
               
chr16:31159561-31159715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 38
               

               
Conread position:
               
158-304
               

               
Cow position:
               
chr16:49174073-49173930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
160-308
               

               
Cow position:
               
chr16:39385415-39385266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
163-308
               

               
Cow position:
               
chr16:9790629-9790773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
117, 26
               

               
Conread position:
               
194-306
               

               
Cow position:
               
chr16:16424631-16424743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
205-297
               

               
Cow position:
               
chr16:33986618-33986710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.