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Cow genome map

           
Conread name:
           
rcsp04b_a24.y1
        

               
Conread position:
               
1-172
               

               
Cow position:
               
chr18:11672175-11672002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 114
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr18:52649217-52649404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
53, 43
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr18:31082221-31082420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
182, 22
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr18:52414096-52413879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
146, 57
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr18:32252041-32252264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr18:8949675-8949889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr18:9040582-9040806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr18:34219785-34220027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
99, 190
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr18:35535025-35535267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
212, 26
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr18:34834618-34834365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 29
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr18:3085385-3085654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
67, 182
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr18:49841408-49841138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
52, 89
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr18:3417288-3417019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr18:1954458-1954757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr18:4884397-4884681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 22
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr18:9366044-9365744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 23
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr18:33896289-33896600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 57
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr18:54572166-54572465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr18:6310202-6309910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
100, 22
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:6881234-6881522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 22
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:8300147-8299839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 23
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:10904969-10904675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:11691284-11691582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 23
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:17390868-17391151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:29371992-29371694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
280, 44
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:30360021-30360309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:42431970-42432268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 35
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:42479458-42479762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 52
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:45903774-45904068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:55000615-55000910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:55505526-55505232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 22
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr18:12023517-12023814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
2-188
               

               
Cow position:
               
chr18:2773266-2773449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
2-188
               

               
Cow position:
               
chr18:2776769-2776952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr18:36450022-36449807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr18:24508103-24508338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 51
               

               
Conread position:
               
2-245
               

               
Cow position:
               
chr18:4757909-4758151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
188, 38
               

               
Conread position:
               
2-255
               

               
Cow position:
               
chr18:33883910-33883663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 132
               

               
Conread position:
               
2-272
               

               
Cow position:
               
chr18:22055741-22056018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
40, 194
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr18:24266282-24266549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
196, 42
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr18:7956272-7956003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
152, 44
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr18:39623925-39623652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
242, 39
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr18:19688149-19687864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
197, 40
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr18:26999010-26998716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
138, 33
               

               
Conread position:
               
2-305
               

               
Cow position:
               
chr18:51757215-51756922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
246, 22
               

               
Conread position:
               
2-305
               

               
Cow position:
               
chr18:55692939-55692646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
207, 16
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr18:2592039-2592342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr18:7951241-7950944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 26
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr18:20270890-20271193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
138, 42
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr18:5995592-5995293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
274, 42
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr18:7109252-7108952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr18:37381970-37382268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
45, 20
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr18:39662902-39662604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
283, 25
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr18:42454898-42455199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
187, 28
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr18:42747719-42747419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
49, 136
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr18:46276178-46276483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 42
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr18:43555392-43555714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 193
               

               
Conread position:
               
3-236
               

               
Cow position:
               
chr18:25598113-25598344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
161, 21
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr18:9974210-9974498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
4-282
               

               
Cow position:
               
chr18:4556045-4556314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
71, 23
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr18:6005378-6005644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
145, 40
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr18:3158464-3158777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
26, 90
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr18:45104310-45104615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
8-259
               

               
Cow position:
               
chr18:40759336-40759081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
8-308
               

               
Cow position:
               
chr18:3211995-3211697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
191, 35
               

               
Conread position:
               
8-308
               

               
Cow position:
               
chr18:22120767-22121055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
9-308
               

               
Cow position:
               
chr18:55747802-55747509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 15
               

               
Conread position:
               
11-283
               

               
Cow position:
               
chr18:52634951-52635228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 12
               

               
Conread position:
               
12-238
               

               
Cow position:
               
chr18:53038952-53038722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
12-306
               

               
Cow position:
               
chr18:43283643-43283930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
272, 30
               

               
Conread position:
               
12-307
               

               
Cow position:
               
chr18:56184053-56183768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 39
               

               
Conread position:
               
13-308
               

               
Cow position:
               
chr18:37002749-37002459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
16-247
               

               
Cow position:
               
chr18:4534911-4535129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
113, 36
               

               
Conread position:
               
16-283
               

               
Cow position:
               
chr18:16997368-16997103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
31, 37
               

               
Conread position:
               
18-260
               

               
Cow position:
               
chr18:19883649-19883403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr18:7077065-7076840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
19-308
               

               
Cow position:
               
chr18:28768480-28768185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 51
               

               
Conread position:
               
21-304
               

               
Cow position:
               
chr18:46727699-46727430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 53
               

               
Conread position:
               
22-305
               

               
Cow position:
               
chr18:4797074-4796800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
30, 42
               

               
Conread position:
               
22-308
               

               
Cow position:
               
chr18:36201520-36201800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 130
               

               
Conread position:
               
22-308
               

               
Cow position:
               
chr18:48828667-48828956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
24-236
               

               
Cow position:
               
chr18:49324330-49324526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
24-283
               

               
Cow position:
               
chr18:10898136-10897884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
66, 28
               

               
Conread position:
               
24-308
               

               
Cow position:
               
chr18:19896345-19896630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
166, 21
               

               
Conread position:
               
24-308
               

               
Cow position:
               
chr18:21102667-21102948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 66
               

               
Conread position:
               
24-308
               

               
Cow position:
               
chr18:51392537-51392816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 37
               

               
Conread position:
               
25-274
               

               
Cow position:
               
chr18:4264290-4264531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
27-306
               

               
Cow position:
               
chr18:45637311-45637569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 85
               

               
Conread position:
               
27-308
               

               
Cow position:
               
chr18:28923744-28924008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
28-188
               

               
Cow position:
               
chr18:21081792-21081948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
28-304
               

               
Cow position:
               
chr18:25647147-25647422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
28-307
               

               
Cow position:
               
chr18:19193265-19193539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
28-308
               

               
Cow position:
               
chr18:18918856-18919133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
26, 73
               

               
Conread position:
               
28-308
               

               
Cow position:
               
chr18:47835926-47835652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
29-157
               

               
Cow position:
               
chr18:48407838-48407713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
29-189
               

               
Cow position:
               
chr18:44917858-44917699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
29-198
               

               
Cow position:
               
chr18:47705334-47705168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
29-251
               

               
Cow position:
               
chr18:12584740-12584961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
150, 20
               

               
Conread position:
               
29-274
               

               
Cow position:
               
chr18:10214091-10214336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
83, 23
               

               
Conread position:
               
29-286
               

               
Cow position:
               
chr18:35874181-35873925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
29, 51
               

               
Conread position:
               
29-301
               

               
Cow position:
               
chr18:11791020-11790766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
170, 20
               

               
Conread position:
               
29-302
               

               
Cow position:
               
chr18:1399252-1399520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
30, 109
               

               
Conread position:
               
29-307
               

               
Cow position:
               
chr18:39875161-39875432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
29-307
               

               
Cow position:
               
chr18:42431509-42431780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
29-308
               

               
Cow position:
               
chr18:11184039-11183771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
29-308
               

               
Cow position:
               
chr18:29058402-29058668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
29-308
               

               
Cow position:
               
chr18:33008169-33007886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
29, 83
               

               
Conread position:
               
29-308
               

               
Cow position:
               
chr18:36230628-36230894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
139, 20
               

               
Conread position:
               
29-311
               

               
Cow position:
               
chr18:46048853-46048584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
247, 30
               

               
Conread position:
               
29-313
               

               
Cow position:
               
chr18:27109190-27109476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
259, 0
               

               
Conread position:
               
30-245
               

               
Cow position:
               
chr18:11312838-11313050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
59, 19
               

               
Conread position:
               
31-283
               

               
Cow position:
               
chr18:46135841-46135593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
31-304
               

               
Cow position:
               
chr18:28657810-28658079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 156
               

               
Conread position:
               
31-308
               

               
Cow position:
               
chr18:9010809-9010548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
24, 138
               

               
Conread position:
               
32-217
               

               
Cow position:
               
chr18:14830755-14830928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
32-227
               

               
Cow position:
               
chr18:5078674-5078869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
15, 41
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr18:47517106-47517387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
34-274
               

               
Cow position:
               
chr18:55499167-55498930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
13, 40
               

               
Conread position:
               
35-156
               

               
Cow position:
               
chr18:49602946-49603068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
36-249
               

               
Cow position:
               
chr18:49038556-49038344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
11, 17
               

               
Conread position:
               
36-305
               

               
Cow position:
               
chr18:11867435-11867169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 168
               

               
Conread position:
               
36-307
               

               
Cow position:
               
chr18:34527000-34527272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
108, 70
               

               
Conread position:
               
36-308
               

               
Cow position:
               
chr18:29958076-29958332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
267, 47
               

               
Conread position:
               
37-308
               

               
Cow position:
               
chr18:56181363-56181633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
37-313
               

               
Cow position:
               
chr18:13360147-13359885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
25, 33
               

               
Conread position:
               
38-279
               

               
Cow position:
               
chr18:51643272-51643511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
38-286
               

               
Cow position:
               
chr18:48452164-48451906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
102, 164
               

               
Conread position:
               
38-289
               

               
Cow position:
               
chr18:12273752-12273502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
20, 42
               

               
Conread position:
               
38-293
               

               
Cow position:
               
chr18:5632362-5632106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
20, 155
               

               
Conread position:
               
38-308
               

               
Cow position:
               
chr18:4495792-4496062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
9, 164
               

               
Conread position:
               
38-308
               

               
Cow position:
               
chr18:10954561-10954304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
20, 79
               

               
Conread position:
               
38-308
               

               
Cow position:
               
chr18:28101727-28101457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 62
               

               
Conread position:
               
38-308
               

               
Cow position:
               
chr18:48713641-48713375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 14
               

               
Conread position:
               
39-307
               

               
Cow position:
               
chr18:10322896-10322631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
241, 13
               

               
Conread position:
               
42-255
               

               
Cow position:
               
chr18:55119966-55119748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
42-290
               

               
Cow position:
               
chr18:12117762-12117996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 40
               

               
Conread position:
               
42-308
               

               
Cow position:
               
chr18:21740724-21740984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
7, 145
               

               
Conread position:
               
43-187
               

               
Cow position:
               
chr18:16379011-16378867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
43-249
               

               
Cow position:
               
chr18:23630521-23630721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
159, 9
               

               
Conread position:
               
44-308
               

               
Cow position:
               
chr18:22214574-22214307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
149, 15
               

               
Conread position:
               
44-308
               

               
Cow position:
               
chr18:47512094-47511824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 165
               

               
Conread position:
               
45-308
               

               
Cow position:
               
chr18:3193792-3193530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
35, 140
               

               
Conread position:
               
45-308
               

               
Cow position:
               
chr18:51190513-51190765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
46-313
               

               
Cow position:
               
chr18:51212268-51212007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
161, 65
               

               
Conread position:
               
48-307
               

               
Cow position:
               
chr18:55788004-55787755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
48-308
               

               
Cow position:
               
chr18:4539799-4540053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
96, 101
               

               
Conread position:
               
49-183
               

               
Cow position:
               
chr18:50632361-50632495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
131, 14
               

               
Conread position:
               
49-247
               

               
Cow position:
               
chr18:41950284-41950103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
148, 51
               

               
Conread position:
               
49-266
               

               
Cow position:
               
chr18:31711480-31711698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
68, 19
               

               
Conread position:
               
49-267
               

               
Cow position:
               
chr18:22143440-22143657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
49-283
               

               
Cow position:
               
chr18:7963510-7963295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
49-283
               

               
Cow position:
               
chr18:51594722-51594951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
49-291
               

               
Cow position:
               
chr18:52855137-52854892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
49-296
               

               
Cow position:
               
chr18:10891596-10891353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
145, 72
               

               
Conread position:
               
49-304
               

               
Cow position:
               
chr18:8171003-8171255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
49-308
               

               
Cow position:
               
chr18:17005343-17005080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
49-308
               

               
Cow position:
               
chr18:19620023-19619778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
49-308
               

               
Cow position:
               
chr18:25282472-25282727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
50-236
               

               
Cow position:
               
chr18:28930555-28930742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
50-308
               

               
Cow position:
               
chr18:18339867-18340142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 159
               

               
Conread position:
               
52-197
               

               
Cow position:
               
chr18:27388662-27388518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 34
               

               
Conread position:
               
52-205
               

               
Cow position:
               
chr18:23505410-23505257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
52-229
               

               
Cow position:
               
chr18:22568987-22569163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
52-236
               

               
Cow position:
               
chr18:35367116-35367289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
29, 82
               

               
Conread position:
               
52-245
               

               
Cow position:
               
chr18:43796877-43797065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
52-254
               

               
Cow position:
               
chr18:11891807-11891614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
25, 43
               

               
Conread position:
               
52-255
               

               
Cow position:
               
chr18:15517094-15517298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
151, 42
               

               
Conread position:
               
52-255
               

               
Cow position:
               
chr18:49017572-49017381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
160, 47
               

               
Conread position:
               
52-273
               

               
Cow position:
               
chr18:36768732-36768944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 81
               

               
Conread position:
               
52-274
               

               
Cow position:
               
chr18:48242271-48242049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
38, 84
               

               
Conread position:
               
52-286
               

               
Cow position:
               
chr18:1571158-1571389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
52-290
               

               
Cow position:
               
chr18:9089778-9089543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
52-296
               

               
Cow position:
               
chr18:12113286-12113539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
134, 63
               

               
Conread position:
               
52-299
               

               
Cow position:
               
chr18:51850485-51850725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
228, 72
               

               
Conread position:
               
52-301
               

               
Cow position:
               
chr18:3209801-3209547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
52-302
               

               
Cow position:
               
chr18:39434903-39434656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
226, 35
               

               
Conread position:
               
52-305
               

               
Cow position:
               
chr18:22411532-22411787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
52-305
               

               
Cow position:
               
chr18:43020325-43020562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr18:5766492-5766240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
23, 79
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr18:20641417-20641663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
200, 126
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr18:36746180-36746427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr18:37023471-37023725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 144
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr18:50082178-50082422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
52-307
               

               
Cow position:
               
chr18:15613781-15614033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
175, 129
               

               
Conread position:
               
52-307
               

               
Cow position:
               
chr18:19849681-19849929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
127, 20
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr18:11322675-11322422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
217, 143
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr18:19273017-19273272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
141, 199
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr18:23766330-23766587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr18:30794505-30794260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
148, 79
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr18:36459009-36458757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
64, 7
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr18:38687159-38686920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr18:44262709-44262452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 87
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr18:56159540-56159286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
24, 28
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr18:56190883-56191146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
53-307
               

               
Cow position:
               
chr18:11685060-11684815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
54-249
               

               
Cow position:
               
chr18:2146502-2146701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
135, 182
               

               
Conread position:
               
54-273
               

               
Cow position:
               
chr18:25006416-25006628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
54-274
               

               
Cow position:
               
chr18:42751526-42751752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
103, 46
               

               
Conread position:
               
54-304
               

               
Cow position:
               
chr18:20126382-20126135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 63
               

               
Conread position:
               
54-308
               

               
Cow position:
               
chr18:16686256-16686511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 150
               

               
Conread position:
               
54-308
               

               
Cow position:
               
chr18:18592550-18592302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 126
               

               
Conread position:
               
54-308
               

               
Cow position:
               
chr18:29356545-29356801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
54-308
               

               
Cow position:
               
chr18:31672436-31672688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
226, 60
               

               
Conread position:
               
54-308
               

               
Cow position:
               
chr18:49100291-49100544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
54-308
               

               
Cow position:
               
chr18:50637396-50637633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
138, 45
               

               
Conread position:
               
55-304
               

               
Cow position:
               
chr18:7952279-7952031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
135, 92
               

               
Conread position:
               
56-248
               

               
Cow position:
               
chr18:29760102-29759911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
182, 117
               

               
Conread position:
               
57-229
               

               
Cow position:
               
chr18:49015203-49015030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 77
               

               
Conread position:
               
57-295
               

               
Cow position:
               
chr18:11578148-11577927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
57-305
               

               
Cow position:
               
chr18:33299978-33299731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 145
               

               
Conread position:
               
57-305
               

               
Cow position:
               
chr18:45571086-45570843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
57-306
               

               
Cow position:
               
chr18:26939057-26938813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
152, 182
               

               
Conread position:
               
57-307
               

               
Cow position:
               
chr18:38607295-38607050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
88, 53
               

               
Conread position:
               
57-308
               

               
Cow position:
               
chr18:10977137-10977381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
57-308
               

               
Cow position:
               
chr18:18369288-18369537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 11
               

               
Conread position:
               
57-308
               

               
Cow position:
               
chr18:38985773-38985517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
98, 159
               

               
Conread position:
               
57-308
               

               
Cow position:
               
chr18:44801815-44802062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
58-307
               

               
Cow position:
               
chr18:46452805-46453048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
73, 138
               

               
Conread position:
               
59-255
               

               
Cow position:
               
chr18:47966855-47967045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
16, 21
               

               
Conread position:
               
59-274
               

               
Cow position:
               
chr18:36264700-36264906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
59-283
               

               
Cow position:
               
chr18:29474815-29474591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
137, 39
               

               
Conread position:
               
59-290
               

               
Cow position:
               
chr18:20462622-20462850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
42, 134
               

               
Conread position:
               
59-297
               

               
Cow position:
               
chr18:11377436-11377205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
221, 54
               

               
Conread position:
               
59-306
               

               
Cow position:
               
chr18:31586303-31586538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
225, 91
               

               
Conread position:
               
59-311
               

               
Cow position:
               
chr18:4666145-4666388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
153, 19
               

               
Conread position:
               
60-206
               

               
Cow position:
               
chr18:50359403-50359257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
60-234
               

               
Cow position:
               
chr18:20798399-20798219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
60-252
               

               
Cow position:
               
chr18:52406763-52406583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
60-298
               

               
Cow position:
               
chr18:3370971-3370734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
60-308
               

               
Cow position:
               
chr18:1585039-1585291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
6, 247
               

               
Conread position:
               
60-308
               

               
Cow position:
               
chr18:29796357-29796599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
60-313
               

               
Cow position:
               
chr18:51443368-51443612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
205, 84
               

               
Conread position:
               
61-199
               

               
Cow position:
               
chr18:38601814-38601953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
61-223
               

               
Cow position:
               
chr18:9176969-9176811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
143, 79
               

               
Conread position:
               
61-280
               

               
Cow position:
               
chr18:54130257-54130480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
61-301
               

               
Cow position:
               
chr18:48633846-48633625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
61-308
               

               
Cow position:
               
chr18:4182118-4182362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
62-308
               

               
Cow position:
               
chr18:13507671-13507913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
62-313
               

               
Cow position:
               
chr18:50382317-50382079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
63-306
               

               
Cow position:
               
chr18:35012249-35012480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
64-306
               

               
Cow position:
               
chr18:18961769-18962009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
221, 15
               

               
Conread position:
               
64-308
               

               
Cow position:
               
chr18:2863922-2864173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
65-305
               

               
Cow position:
               
chr18:33157883-33157647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
81, 65
               

               
Conread position:
               
65-308
               

               
Cow position:
               
chr18:55788930-55789164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
66-255
               

               
Cow position:
               
chr18:44483708-44483893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
67-308
               

               
Cow position:
               
chr18:4748819-4749052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
214, 11
               

               
Conread position:
               
68-308
               

               
Cow position:
               
chr18:10576174-10575934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
76, 182
               

               
Conread position:
               
73-308
               

               
Cow position:
               
chr18:4381351-4381117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
74-313
               

               
Cow position:
               
chr18:36183850-36184080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
211, 5
               

               
Conread position:
               
78-283
               

               
Cow position:
               
chr18:20174076-20174278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
78-308
               

               
Cow position:
               
chr18:5578360-5578132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
78-308
               

               
Cow position:
               
chr18:21176240-21176012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
113, 59
               

               
Conread position:
               
80-306
               

               
Cow position:
               
chr18:11618519-11618306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 73
               

               
Conread position:
               
82-308
               

               
Cow position:
               
chr18:25206139-25206364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
83-279
               

               
Cow position:
               
chr18:36296964-36297169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
84-308
               

               
Cow position:
               
chr18:6609810-6610034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
33, 109
               

               
Conread position:
               
88-308
               

               
Cow position:
               
chr18:5487285-5487076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
89-267
               

               
Cow position:
               
chr18:55549771-55549595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
102, 48
               

               
Conread position:
               
89-279
               

               
Cow position:
               
chr18:2151616-2151437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
89-295
               

               
Cow position:
               
chr18:23623591-23623795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
187, 112
               

               
Conread position:
               
89-308
               

               
Cow position:
               
chr18:39001765-39001977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
191, 41
               

               
Conread position:
               
89-308
               

               
Cow position:
               
chr18:55553009-55552795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
192, 103
               

               
Conread position:
               
91-305
               

               
Cow position:
               
chr18:35537196-35537406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
108, 19
               

               
Conread position:
               
91-306
               

               
Cow position:
               
chr18:4601978-4602182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
91-308
               

               
Cow position:
               
chr18:25984531-25984744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
91-308
               

               
Cow position:
               
chr18:55806593-55806808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
185, 104
               

               
Conread position:
               
94-298
               

               
Cow position:
               
chr18:30248102-30248294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
69, 36
               

               
Conread position:
               
94-307
               

               
Cow position:
               
chr18:15880807-15881030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
104, 220
               

               
Conread position:
               
95-283
               

               
Cow position:
               
chr18:50095364-50095543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 5
               

               
Conread position:
               
95-306
               

               
Cow position:
               
chr18:22274805-22275008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
200, 18
               

               
Conread position:
               
95-308
               

               
Cow position:
               
chr18:32883340-32883132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
96-304
               

               
Cow position:
               
chr18:55461671-55461878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
100-225
               

               
Cow position:
               
chr18:52647613-52647738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
99, 90
               

               
Conread position:
               
100-257
               

               
Cow position:
               
chr18:53776506-53776348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 51
               

               
Conread position:
               
100-274
               

               
Cow position:
               
chr18:11907227-11907055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
133, 16
               

               
Conread position:
               
100-279
               

               
Cow position:
               
chr18:51643987-51644168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
100-289
               

               
Cow position:
               
chr18:858855-858664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
100-293
               

               
Cow position:
               
chr18:43950857-43950664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
91, 114
               

               
Conread position:
               
100-297
               

               
Cow position:
               
chr18:30405629-30405826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
78, 102
               

               
Conread position:
               
100-306
               

               
Cow position:
               
chr18:51405875-51406083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
133, 78
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr18:17649707-17649915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
91, 113
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr18:19143479-19143690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
180, 47
               

               
Conread position:
               
100-311
               

               
Cow position:
               
chr18:51827312-51827115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
181, 90
               

               
Conread position:
               
101-293
               

               
Cow position:
               
chr18:9558008-9557824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
101-305
               

               
Cow position:
               
chr18:3027330-3027533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
101-327
               

               
Cow position:
               
chr18:35663921-35663699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
180, 89
               

               
Conread position:
               
102-224
               

               
Cow position:
               
chr18:42954035-42954157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
102-300
               

               
Cow position:
               
chr18:4330990-4330788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
85, 124
               

               
Conread position:
               
104-297
               

               
Cow position:
               
chr18:4952183-4952372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
94, 32
               

               
Conread position:
               
104-308
               

               
Cow position:
               
chr18:7415004-7415203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
172, 50
               

               
Conread position:
               
105-283
               

               
Cow position:
               
chr18:43065556-43065379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
83, 97
               

               
Conread position:
               
105-295
               

               
Cow position:
               
chr18:47812496-47812306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
77, 32
               

               
Conread position:
               
106-308
               

               
Cow position:
               
chr18:8104914-8105120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
107-254
               

               
Cow position:
               
chr18:45079449-45079595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
107-308
               

               
Cow position:
               
chr18:6103073-6103271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
83, 124
               

               
Conread position:
               
108-299
               

               
Cow position:
               
chr18:11832143-11831963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
108-308
               

               
Cow position:
               
chr18:33407640-33407440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
195, 88
               

               
Conread position:
               
110-308
               

               
Cow position:
               
chr18:219359-219158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
111-308
               

               
Cow position:
               
chr18:14048729-14048540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
113-308
               

               
Cow position:
               
chr18:267801-267990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
167, 24
               

               
Conread position:
               
116-256
               

               
Cow position:
               
chr18:52402952-52403094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
118-308
               

               
Cow position:
               
chr18:36098225-36098027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
121-307
               

               
Cow position:
               
chr18:56361593-56361774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
60, 75
               

               
Conread position:
               
122-308
               

               
Cow position:
               
chr18:19887572-19887749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
123-308
               

               
Cow position:
               
chr18:48453696-48453520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
125-308
               

               
Cow position:
               
chr18:7487256-7487084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
127-291
               

               
Cow position:
               
chr18:46047875-46047708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 77
               

               
Conread position:
               
127-306
               

               
Cow position:
               
chr18:44548908-44549087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
137-308
               

               
Cow position:
               
chr18:21205358-21205188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
138-308
               

               
Cow position:
               
chr18:10861436-10861612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
141, 58
               

               
Conread position:
               
140-306
               

               
Cow position:
               
chr18:56150652-56150822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
141-308
               

               
Cow position:
               
chr18:7970362-7970193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
63, 51
               

               
Conread position:
               
141-308
               

               
Cow position:
               
chr18:33606621-33606454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
139, 55
               

               
Conread position:
               
142-308
               

               
Cow position:
               
chr18:11680713-11680550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
142-315
               

               
Cow position:
               
chr18:24945816-24945990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
50, 61
               

               
Conread position:
               
147-313
               

               
Cow position:
               
chr18:14085448-14085282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
54, 114
               

               
Conread position:
               
148-304
               

               
Cow position:
               
chr18:35582114-35582271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
148-308
               

               
Cow position:
               
chr18:15340461-15340621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
79, 54
               

               
Conread position:
               
156-308
               

               
Cow position:
               
chr18:16847670-16847517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
156-308
               

               
Cow position:
               
chr18:18868730-18868573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
159-283
               

               
Cow position:
               
chr18:42966838-42966715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
159-306
               

               
Cow position:
               
chr18:29388194-29388047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
164-307
               

               
Cow position:
               
chr18:8164066-8164209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
87, 129
               

               
Conread position:
               
201-306
               

               
Cow position:
               
chr18:13293444-13293338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
30, 0
               
Show alignments to all cow chromosomes.