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Cow genome map

           
Conread name:
           
rcsp04b_a24.y1
        

               
Conread position:
               
1-137
               

               
Cow position:
               
chr20:26387658-26387531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr20:15530061-15529867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
194, 25
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr20:19060642-19060866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
161, 21
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr20:25953465-25953219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 44
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr20:11751852-11751582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
206, 33
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr20:17251917-17251642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr20:15548691-15548987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
208, 86
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr20:27407696-27407966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
133, 26
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr20:26996732-26996436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr20:2819746-2819444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 25
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr20:5998459-5998767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 206
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr20:8578449-8578149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr20:12420421-12420717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr20:31740018-31740319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr20:32463327-32463620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr20:5365126-5364926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr20:1293831-1294075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
2-255
               

               
Cow position:
               
chr20:39016672-39016922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
152, 42
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr20:16818618-16818357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
229, 40
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr20:354701-354961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr20:33067162-33067428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
201, 38
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr20:8098486-8098215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
186, 38
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr20:33976686-33976408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
153, 110
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr20:16548075-16548359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
48, 25
               

               
Conread position:
               
2-305
               

               
Cow position:
               
chr20:24712041-24711739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
136, 40
               

               
Conread position:
               
2-305
               

               
Cow position:
               
chr20:35741968-35741654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
220, 43
               

               
Conread position:
               
2-306
               

               
Cow position:
               
chr20:20099398-20099693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
143, 24
               

               
Conread position:
               
2-306
               

               
Cow position:
               
chr20:39417705-39417996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
229, 22
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr20:22959148-22959440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
279, 38
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr20:10200546-10200248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
191, 43
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr20:11340606-11340900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
121, 21
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr20:11611878-11611582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
279, 40
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr20:14433223-14433527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
146, 34
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr20:15118475-15118177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
278, 39
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr20:21019762-21019465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
202, 50
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr20:28594490-28594184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
113, 12
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr20:34251472-34251782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
130, 24
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr20:41028689-41028388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
165, 24
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr20:5814766-5814470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
278, 42
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr20:38090112-38089847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
4-188
               

               
Cow position:
               
chr20:34202835-34202653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
71, 45
               

               
Conread position:
               
4-233
               

               
Cow position:
               
chr20:12126106-12126328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
4-272
               

               
Cow position:
               
chr20:11008368-11008108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
4-305
               

               
Cow position:
               
chr20:12995798-12996105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
16, 106
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr20:6054311-6054617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
197, 37
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr20:13269809-13269528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr20:41089597-41089889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
112, 40
               

               
Conread position:
               
4-310
               

               
Cow position:
               
chr20:29845250-29844949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
284, 45
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chr20:20352716-20352979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
160, 35
               

               
Conread position:
               
6-308
               

               
Cow position:
               
chr20:39398683-39398387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 185
               

               
Conread position:
               
8-199
               

               
Cow position:
               
chr20:3148874-3148692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
8-231
               

               
Cow position:
               
chr20:36239441-36239220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
182, 19
               

               
Conread position:
               
8-271
               

               
Cow position:
               
chr20:23850813-23850559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 22
               

               
Conread position:
               
8-304
               

               
Cow position:
               
chr20:6240329-6240616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
8-308
               

               
Cow position:
               
chr20:4945059-4945348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
269, 22
               

               
Conread position:
               
8-308
               

               
Cow position:
               
chr20:34097757-34098057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
137, 44
               

               
Conread position:
               
12-274
               

               
Cow position:
               
chr20:21345625-21345363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
140, 59
               

               
Conread position:
               
13-307
               

               
Cow position:
               
chr20:9266913-9267198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
14-296
               

               
Cow position:
               
chr20:38551554-38551286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
266, 35
               

               
Conread position:
               
14-308
               

               
Cow position:
               
chr20:42469955-42469663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
9, 113
               

               
Conread position:
               
16-248
               

               
Cow position:
               
chr20:40158090-40157862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
16-308
               

               
Cow position:
               
chr20:20242275-20242001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
16-308
               

               
Cow position:
               
chr20:20739099-20739391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
169, 36
               

               
Conread position:
               
17-236
               

               
Cow position:
               
chr20:21815748-21815534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
19-308
               

               
Cow position:
               
chr20:7363145-7362870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
22-295
               

               
Cow position:
               
chr20:18392089-18392347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
258, 27
               

               
Conread position:
               
22-308
               

               
Cow position:
               
chr20:21761961-21761677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 155
               

               
Conread position:
               
24-301
               

               
Cow position:
               
chr20:9537312-9537042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
180, 28
               

               
Conread position:
               
24-308
               

               
Cow position:
               
chr20:23064649-23064928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 106
               

               
Conread position:
               
25-304
               

               
Cow position:
               
chr20:15822728-15822457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
239, 57
               

               
Conread position:
               
27-306
               

               
Cow position:
               
chr20:22978506-22978224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
27-307
               

               
Cow position:
               
chr20:40446507-40446233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
252, 36
               

               
Conread position:
               
28-249
               

               
Cow position:
               
chr20:21428335-21428120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
132, 21
               

               
Conread position:
               
28-255
               

               
Cow position:
               
chr20:9376646-9376423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
28-267
               

               
Cow position:
               
chr20:38514956-38514724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
28-308
               

               
Cow position:
               
chr20:5636660-5636385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
101, 123
               

               
Conread position:
               
28-308
               

               
Cow position:
               
chr20:5827120-5826842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
29, 129
               

               
Conread position:
               
29-188
               

               
Cow position:
               
chr20:15766288-15766130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
105, 29
               

               
Conread position:
               
29-279
               

               
Cow position:
               
chr20:6248422-6248665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
47, 206
               

               
Conread position:
               
29-306
               

               
Cow position:
               
chr20:30710458-30710743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
29-308
               

               
Cow position:
               
chr20:11550542-11550267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
167, 18
               

               
Conread position:
               
29-308
               

               
Cow position:
               
chr20:31289683-31289399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
174, 39
               

               
Conread position:
               
31-306
               

               
Cow position:
               
chr20:24834267-24833997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
30, 101
               

               
Conread position:
               
34-308
               

               
Cow position:
               
chr20:3255207-3254954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
34-308
               

               
Cow position:
               
chr20:9412658-9412391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
36-296
               

               
Cow position:
               
chr20:12581783-12582037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 0
               

               
Conread position:
               
36-306
               

               
Cow position:
               
chr20:28605379-28605107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
36-307
               

               
Cow position:
               
chr20:40692236-40691958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
17, 162
               

               
Conread position:
               
36-308
               

               
Cow position:
               
chr20:18379550-18379283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 72
               

               
Conread position:
               
36-308
               

               
Cow position:
               
chr20:22065234-22064972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 20
               

               
Conread position:
               
36-308
               

               
Cow position:
               
chr20:24069978-24069705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 35
               

               
Conread position:
               
36-308
               

               
Cow position:
               
chr20:28982871-28982600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
36-311
               

               
Cow position:
               
chr20:25009460-25009741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
22, 138
               

               
Conread position:
               
36-316
               

               
Cow position:
               
chr20:19363191-19363470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
37-257
               

               
Cow position:
               
chr20:35842955-35843175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 91
               

               
Conread position:
               
37-280
               

               
Cow position:
               
chr20:21204523-21204289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
13, 27
               

               
Conread position:
               
37-293
               

               
Cow position:
               
chr20:34001227-34001477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
159, 15
               

               
Conread position:
               
38-273
               

               
Cow position:
               
chr20:12239513-12239747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 93
               

               
Conread position:
               
38-291
               

               
Cow position:
               
chr20:16492244-16491990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
15, 161
               

               
Conread position:
               
38-308
               

               
Cow position:
               
chr20:7438684-7438951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
39-255
               

               
Cow position:
               
chr20:4786853-4787059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
163, 10
               

               
Conread position:
               
40-308
               

               
Cow position:
               
chr20:40782129-40781867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
18, 150
               

               
Conread position:
               
41-283
               

               
Cow position:
               
chr20:11548558-11548796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 32
               

               
Conread position:
               
41-296
               

               
Cow position:
               
chr20:40177408-40177159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
42-308
               

               
Cow position:
               
chr20:18320630-18320890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
44-229
               

               
Cow position:
               
chr20:7756462-7756644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
44-306
               

               
Cow position:
               
chr20:15312829-15312567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
78, 8
               

               
Conread position:
               
45-204
               

               
Cow position:
               
chr20:8817330-8817488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
153, 15
               

               
Conread position:
               
45-306
               

               
Cow position:
               
chr20:8556107-8556367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
46-289
               

               
Cow position:
               
chr20:11188648-11188876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
47-304
               

               
Cow position:
               
chr20:23541002-23541252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
194, 21
               

               
Conread position:
               
48-259
               

               
Cow position:
               
chr20:10772364-10772154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
48-304
               

               
Cow position:
               
chr20:36779571-36779825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
212, 15
               

               
Conread position:
               
48-305
               

               
Cow position:
               
chr20:40511599-40511853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
150, 19
               

               
Conread position:
               
48-308
               

               
Cow position:
               
chr20:38768304-38768555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
49-185
               

               
Cow position:
               
chr20:24314875-24315011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 52
               

               
Conread position:
               
49-202
               

               
Cow position:
               
chr20:24097159-24097006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
49-283
               

               
Cow position:
               
chr20:30888194-30887960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 111
               

               
Conread position:
               
49-294
               

               
Cow position:
               
chr20:5644945-5644702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
49-296
               

               
Cow position:
               
chr20:23846505-23846756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
49-306
               

               
Cow position:
               
chr20:5385585-5385839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
49-307
               

               
Cow position:
               
chr20:11741146-11741398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
22, 104
               

               
Conread position:
               
49-308
               

               
Cow position:
               
chr20:8702753-8703008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
45, 105
               

               
Conread position:
               
49-308
               

               
Cow position:
               
chr20:33144397-33144654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
236, 11
               

               
Conread position:
               
49-308
               

               
Cow position:
               
chr20:34108263-34108014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
50-308
               

               
Cow position:
               
chr20:22485016-22484761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
230, 103
               

               
Conread position:
               
50-308
               

               
Cow position:
               
chr20:39266801-39267058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 90
               

               
Conread position:
               
52-181
               

               
Cow position:
               
chr20:36312353-36312482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
52-209
               

               
Cow position:
               
chr20:20158291-20158131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
52-227
               

               
Cow position:
               
chr20:5702879-5702704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
164, 140
               

               
Conread position:
               
52-234
               

               
Cow position:
               
chr20:26723526-26723699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
52-243
               

               
Cow position:
               
chr20:21372463-21372273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
23, 28
               

               
Conread position:
               
52-256
               

               
Cow position:
               
chr20:24902138-24902345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
52-280
               

               
Cow position:
               
chr20:11359477-11359694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
98, 103
               

               
Conread position:
               
52-283
               

               
Cow position:
               
chr20:34777335-34777112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
52-289
               

               
Cow position:
               
chr20:5078782-5078544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
52-296
               

               
Cow position:
               
chr20:6424124-6423885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
10, 87
               

               
Conread position:
               
52-297
               

               
Cow position:
               
chr20:38868788-38868557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
52-300
               

               
Cow position:
               
chr20:15568794-15569037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
228, 137
               

               
Conread position:
               
52-300
               

               
Cow position:
               
chr20:29805504-29805750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
144, 44
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr20:4334374-4334620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
24, 141
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr20:7738076-7738323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr20:19751462-19751211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
113, 92
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr20:28067269-28067523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
143, 26
               

               
Conread position:
               
52-307
               

               
Cow position:
               
chr20:6603196-6602942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
76, 67
               

               
Conread position:
               
52-307
               

               
Cow position:
               
chr20:7426042-7426285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
52-307
               

               
Cow position:
               
chr20:8547221-8546968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 64
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr20:580765-581020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
140, 185
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr20:2298635-2298876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
189, 41
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr20:6096340-6096592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr20:9433742-9433488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr20:10208963-10208707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
98, 37
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr20:13752379-13752141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
82, 7
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr20:14679772-14679517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr20:14879944-14879691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
229, 0
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr20:14980351-14980610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr20:15565674-15565926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
222, 57
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr20:19237230-19236979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
23, 28
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr20:31081193-31080943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr20:36207969-36207707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
107, 237
               

               
Conread position:
               
52-319
               

               
Cow position:
               
chr20:17100517-17100252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
54-236
               

               
Cow position:
               
chr20:25351260-25351434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
145, 62
               

               
Conread position:
               
54-274
               

               
Cow position:
               
chr20:20056333-20056549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
111, 61
               

               
Conread position:
               
54-283
               

               
Cow position:
               
chr20:38670903-38670685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
54-306
               

               
Cow position:
               
chr20:14572211-14572456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
96, 33
               

               
Conread position:
               
54-306
               

               
Cow position:
               
chr20:35710329-35710075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
34, 180
               

               
Conread position:
               
54-308
               

               
Cow position:
               
chr20:20203372-20203117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 139
               

               
Conread position:
               
54-308
               

               
Cow position:
               
chr20:22235465-22235216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
62, 140
               

               
Conread position:
               
54-308
               

               
Cow position:
               
chr20:25161972-25162227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
54-308
               

               
Cow position:
               
chr20:32083929-32084180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
153, 79
               

               
Conread position:
               
55-246
               

               
Cow position:
               
chr20:6358772-6358578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
55-308
               

               
Cow position:
               
chr20:16935163-16935398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
56-308
               

               
Cow position:
               
chr20:3320993-3321240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
131, 77
               

               
Conread position:
               
56-308
               

               
Cow position:
               
chr20:14807038-14806787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
57-250
               

               
Cow position:
               
chr20:2169573-2169762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
57-294
               

               
Cow position:
               
chr20:38578614-38578844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
149, 89
               

               
Conread position:
               
57-306
               

               
Cow position:
               
chr20:11542137-11542380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 103
               

               
Conread position:
               
58-227
               

               
Cow position:
               
chr20:14620152-14620327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
58-308
               

               
Cow position:
               
chr20:23792753-23792512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
58-311
               

               
Cow position:
               
chr20:35365191-35364944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
143, 20
               

               
Conread position:
               
59-298
               

               
Cow position:
               
chr20:26077520-26077746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
59-304
               

               
Cow position:
               
chr20:41883878-41883641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
162, 49
               

               
Conread position:
               
59-306
               

               
Cow position:
               
chr20:8308164-8307920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
199, 14
               

               
Conread position:
               
59-308
               

               
Cow position:
               
chr20:7211182-7210941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
59-308
               

               
Cow position:
               
chr20:13025462-13025709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
63, 137
               

               
Conread position:
               
59-308
               

               
Cow position:
               
chr20:15235900-15235670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
59-308
               

               
Cow position:
               
chr20:21929053-21928805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
221, 134
               

               
Conread position:
               
59-308
               

               
Cow position:
               
chr20:35906902-35907151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
68, 137
               

               
Conread position:
               
60-308
               

               
Cow position:
               
chr20:15593433-15593197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
139, 70
               

               
Conread position:
               
60-308
               

               
Cow position:
               
chr20:26077229-26076985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
130, 114
               

               
Conread position:
               
60-308
               

               
Cow position:
               
chr20:38818149-38817907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
10, 78
               

               
Conread position:
               
60-308
               

               
Cow position:
               
chr20:39728598-39728349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
60, 40
               

               
Conread position:
               
61-272
               

               
Cow position:
               
chr20:22030467-22030258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
61-298
               

               
Cow position:
               
chr20:32866047-32866276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 49
               

               
Conread position:
               
62-305
               

               
Cow position:
               
chr20:12430653-12430891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
63-250
               

               
Cow position:
               
chr20:22000146-21999957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
76, 66
               

               
Conread position:
               
63-275
               

               
Cow position:
               
chr20:7624101-7624312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
63-293
               

               
Cow position:
               
chr20:28441471-28441246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
63-301
               

               
Cow position:
               
chr20:22265108-22265337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
63-307
               

               
Cow position:
               
chr20:35797753-35797511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
133, 67
               

               
Conread position:
               
63-308
               

               
Cow position:
               
chr20:20984136-20983899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
64-274
               

               
Cow position:
               
chr20:23506326-23506534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
16, 123
               

               
Conread position:
               
64-295
               

               
Cow position:
               
chr20:34596954-34597186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
64-303
               

               
Cow position:
               
chr20:33363661-33363423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
135, 174
               

               
Conread position:
               
65-308
               

               
Cow position:
               
chr20:7441994-7442225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
65-308
               

               
Cow position:
               
chr20:23286192-23286422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
5, 74
               

               
Conread position:
               
69-308
               

               
Cow position:
               
chr20:28955563-28955801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
207, 123
               

               
Conread position:
               
72-226
               

               
Cow position:
               
chr20:1009571-1009722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
72-249
               

               
Cow position:
               
chr20:39212446-39212621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
148, 66
               

               
Conread position:
               
72-254
               

               
Cow position:
               
chr20:39613139-39613319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
74-308
               

               
Cow position:
               
chr20:36040607-36040372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
33, 5
               

               
Conread position:
               
77-308
               

               
Cow position:
               
chr20:3739873-3740099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 114
               

               
Conread position:
               
78-308
               

               
Cow position:
               
chr20:25686219-25686447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
118, 85
               

               
Conread position:
               
79-297
               

               
Cow position:
               
chr20:38872873-38873096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 129
               

               
Conread position:
               
84-306
               

               
Cow position:
               
chr20:3606838-3607053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
84-308
               

               
Cow position:
               
chr20:22313037-22313257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
84-309
               

               
Cow position:
               
chr20:11482011-11482235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
196, 105
               

               
Conread position:
               
86-283
               

               
Cow position:
               
chr20:30119454-30119647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
147, 50
               

               
Conread position:
               
89-279
               

               
Cow position:
               
chr20:33819340-33819150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
102, 114
               

               
Conread position:
               
89-304
               

               
Cow position:
               
chr20:32523582-32523365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
192, 123
               

               
Conread position:
               
91-267
               

               
Cow position:
               
chr20:32665255-32665076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
101, 145
               

               
Conread position:
               
91-306
               

               
Cow position:
               
chr20:6257942-6258157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
13, 113
               

               
Conread position:
               
91-306
               

               
Cow position:
               
chr20:33435039-33435265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
91-308
               

               
Cow position:
               
chr20:4206088-4205868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
93-279
               

               
Cow position:
               
chr20:35192886-35192708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
93-285
               

               
Cow position:
               
chr20:10996224-10996033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
94-297
               

               
Cow position:
               
chr20:34085181-34084978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
72, 100
               

               
Conread position:
               
95-279
               

               
Cow position:
               
chr20:17765219-17765399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
163, 46
               

               
Conread position:
               
95-308
               

               
Cow position:
               
chr20:21714873-21714653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
38, 102
               

               
Conread position:
               
95-309
               

               
Cow position:
               
chr20:23103335-23103120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
96-308
               

               
Cow position:
               
chr20:39518118-39517908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
97-308
               

               
Cow position:
               
chr20:16715502-16715301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
48, 95
               

               
Conread position:
               
100-268
               

               
Cow position:
               
chr20:39962682-39962517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
100-274
               

               
Cow position:
               
chr20:32513109-32512935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 22
               

               
Conread position:
               
100-306
               

               
Cow position:
               
chr20:3331178-3331387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
80, 85
               

               
Conread position:
               
100-307
               

               
Cow position:
               
chr20:13821472-13821680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
97, 10
               

               
Conread position:
               
100-307
               

               
Cow position:
               
chr20:31927355-31927552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 54
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr20:4332237-4332039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
193, 86
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr20:19616599-19616387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr20:28296401-28296192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
61, 81
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr20:36010903-36010694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
181, 102
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr20:39415857-39415645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
103, 75
               

               
Conread position:
               
100-313
               

               
Cow position:
               
chr20:39325498-39325285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
138, 90
               

               
Conread position:
               
101-235
               

               
Cow position:
               
chr20:35354715-35354849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 101
               

               
Conread position:
               
101-302
               

               
Cow position:
               
chr20:13983462-13983270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
101-305
               

               
Cow position:
               
chr20:7659107-7659314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 104
               

               
Conread position:
               
101-308
               

               
Cow position:
               
chr20:6890820-6890617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
175, 95
               

               
Conread position:
               
101-313
               

               
Cow position:
               
chr20:13795087-13794885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
179, 30
               

               
Conread position:
               
103-308
               

               
Cow position:
               
chr20:24000693-24000898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
186, 89
               

               
Conread position:
               
104-308
               

               
Cow position:
               
chr20:23505931-23505732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
104-308
               

               
Cow position:
               
chr20:40257073-40256869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
176, 88
               

               
Conread position:
               
104-313
               

               
Cow position:
               
chr20:19146981-19146770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
22, 89
               

               
Conread position:
               
106-308
               

               
Cow position:
               
chr20:39019797-39019596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
107-268
               

               
Cow position:
               
chr20:37339016-37338856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
107-308
               

               
Cow position:
               
chr20:28804670-28804464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 161
               

               
Conread position:
               
108-288
               

               
Cow position:
               
chr20:17530314-17530494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
77, 23
               

               
Conread position:
               
110-279
               

               
Cow position:
               
chr20:7384167-7384342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
92, 44
               

               
Conread position:
               
110-308
               

               
Cow position:
               
chr20:10884260-10884459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
171, 91
               

               
Conread position:
               
110-308
               

               
Cow position:
               
chr20:34901669-34901470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
112-296
               

               
Cow position:
               
chr20:32830334-32830154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
112-306
               

               
Cow position:
               
chr20:22704390-22704195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
113-308
               

               
Cow position:
               
chr20:10348845-10348647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
117-308
               

               
Cow position:
               
chr20:14735759-14735577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
120-300
               

               
Cow position:
               
chr20:282838-283016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
76, 90
               

               
Conread position:
               
122-308
               

               
Cow position:
               
chr20:13967171-13967359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
123-282
               

               
Cow position:
               
chr20:9473530-9473687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
135-274
               

               
Cow position:
               
chr20:41403649-41403512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
135-313
               

               
Cow position:
               
chr20:18185638-18185465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
74, 6
               

               
Conread position:
               
137-283
               

               
Cow position:
               
chr20:37357678-37357533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
137-308
               

               
Cow position:
               
chr20:17904229-17904061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
138-307
               

               
Cow position:
               
chr20:39247982-39247814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
141-308
               

               
Cow position:
               
chr20:28832037-28831869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 51
               

               
Conread position:
               
147-308
               

               
Cow position:
               
chr20:30817598-30817436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
148-303
               

               
Cow position:
               
chr20:37272774-37272618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
140, 42
               

               
Conread position:
               
150-308
               

               
Cow position:
               
chr20:20312690-20312845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
150-310
               

               
Cow position:
               
chr20:15760892-15761047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
155-308
               

               
Cow position:
               
chr20:11923192-11923342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 33
               

               
Conread position:
               
155-308
               

               
Cow position:
               
chr20:24392031-24391885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
155-313
               

               
Cow position:
               
chr20:41973697-41973853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
159-308
               

               
Cow position:
               
chr20:26469014-26469163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
45, 35
               

               
Conread position:
               
164-274
               

               
Cow position:
               
chr20:396560-396448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
164-308
               

               
Cow position:
               
chr20:3781380-3781525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
174-296
               

               
Cow position:
               
chr20:39154824-39154702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
184-308
               

               
Cow position:
               
chr20:18837132-18837255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               
Show alignments to all cow chromosomes.