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Cow genome map

           
Conread name:
           
rcsp04b_a24.y1
        

               
Conread position:
               
1-128
               

               
Cow position:
               
chr4:56307955-56307831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr4:29317919-29318091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
62, 51
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr4:33838656-33838823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr4:10558684-10558496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr4:65753087-65753300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr4:38209828-38210030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
201, 22
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr4:59001991-59002210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr4:46435481-46435242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 54
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:52831868-52832149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 36
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr4:21874325-21874036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 23
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr4:46527151-46526858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
112, 41
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr4:54871876-54872165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
283, 44
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr4:12030996-12030707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
204, 51
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr4:64192033-64192332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr4:48152224-48152509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr4:3688076-3687777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 21
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr4:15439733-15439432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
86, 44
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr4:17186202-17186499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 39
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr4:54927283-54927586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 248
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr4:18095512-18095821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 85
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr4:3341104-3340802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr4:19097438-19097140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr4:21531493-21531793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 36
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr4:22236331-22236630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
108, 44
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr4:26659447-26659155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
103, 22
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr4:34022439-34022736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr4:38935508-38935207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 23
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr4:42423658-42423947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
203, 22
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr4:46550539-46550239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
46, 52
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr4:48486143-48485855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 22
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr4:59277327-59277625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr4:65919765-65919464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
57, 131
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr4:19700254-19699955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 132
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr4:40414481-40414780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 23
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr4:68569497-68569807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
118, 22
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr4:14153266-14152929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr4:28841566-28841351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr4:49800842-49800626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
2-231
               

               
Cow position:
               
chr4:68456768-68456991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
67, 46
               

               
Conread position:
               
2-251
               

               
Cow position:
               
chr4:44772893-44773138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
211, 43
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr4:20142756-20143002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
52, 104
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr4:7350-7606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr4:28836684-28836411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
196, 42
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr4:45074205-45073940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr4:51851358-51851082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
98, 25
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr4:12004364-12004100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr4:27665163-27664873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
279, 31
               

               
Conread position:
               
2-306
               

               
Cow position:
               
chr4:36577465-36577777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
49, 112
               

               
Conread position:
               
2-306
               

               
Cow position:
               
chr4:46455919-46456208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
282, 42
               

               
Conread position:
               
2-306
               

               
Cow position:
               
chr4:59871627-59871338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr4:3388693-3388396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
286, 43
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr4:29107057-29106755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
278, 34
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr4:45250120-45249828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr4:13590233-13589938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
278, 30
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr4:15905252-15904949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
115, 42
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr4:17052439-17052751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
45, 59
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr4:18974572-18974282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
280, 32
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr4:22073171-22073465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
52, 21
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr4:22101115-22101409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr4:23444892-23445202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 50
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr4:23450944-23451247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
146, 25
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr4:27276397-27276695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
197, 21
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr4:34631053-34630745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 61
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr4:43894663-43894960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr4:48322183-48321875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
111, 25
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr4:51903755-51903452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
286, 40
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr4:54478768-54479053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr4:54524184-54524479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
49, 101
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr4:58248549-58248255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
202, 25
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr4:23600315-23600026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
297, 22
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr4:6653870-6653576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr4:41867594-41867290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
21, 86
               

               
Conread position:
               
3-236
               

               
Cow position:
               
chr4:45706191-45705968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr4:38946364-38946072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
143, 24
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr4:18756583-18756288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
195, 43
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr4:37313316-37313025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
3-326
               

               
Cow position:
               
chr4:37732334-37732646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
291, 39
               

               
Conread position:
               
4-196
               

               
Cow position:
               
chr4:1645939-1646131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 75
               

               
Conread position:
               
4-253
               

               
Cow position:
               
chr4:64040274-64040025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 156
               

               
Conread position:
               
4-269
               

               
Cow position:
               
chr4:65265144-65265421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
43, 177
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr4:46494449-46494181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
125, 38
               

               
Conread position:
               
4-282
               

               
Cow position:
               
chr4:24371712-24371975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
152, 31
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr4:32458712-32459006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
146, 40
               

               
Conread position:
               
4-302
               

               
Cow position:
               
chr4:45589447-45589742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
47, 77
               

               
Conread position:
               
4-306
               

               
Cow position:
               
chr4:45662363-45662655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
124, 48
               

               
Conread position:
               
4-306
               

               
Cow position:
               
chr4:49629630-49629336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
146, 18
               

               
Conread position:
               
4-307
               

               
Cow position:
               
chr4:2099778-2099485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
4-307
               

               
Cow position:
               
chr4:52748313-52748606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
183, 23
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr4:13326807-13327103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
190, 14
               

               
Conread position:
               
4-313
               

               
Cow position:
               
chr4:34383194-34383501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
276, 40
               

               
Conread position:
               
4-313
               

               
Cow position:
               
chr4:51769254-51768958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
274, 22
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chr4:63793-64053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
5-308
               

               
Cow position:
               
chr4:19500944-19501233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
8-254
               

               
Cow position:
               
chr4:46476798-46477048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
156, 50
               

               
Conread position:
               
8-297
               

               
Cow position:
               
chr4:25537690-25537407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 19
               

               
Conread position:
               
8-308
               

               
Cow position:
               
chr4:1985791-1985494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
8-308
               

               
Cow position:
               
chr4:10915691-10915986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
146, 41
               

               
Conread position:
               
8-308
               

               
Cow position:
               
chr4:36893508-36893208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
50, 30
               

               
Conread position:
               
8-328
               

               
Cow position:
               
chr4:6659672-6659985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
139, 28
               

               
Conread position:
               
9-283
               

               
Cow position:
               
chr4:13222038-13222306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
49, 138
               

               
Conread position:
               
10-274
               

               
Cow position:
               
chr4:19584851-19584602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
48, 122
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr4:2602374-2602082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
184, 42
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr4:51899153-51898858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
37, 50
               

               
Conread position:
               
11-306
               

               
Cow position:
               
chr4:31505881-31506179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
88, 44
               

               
Conread position:
               
11-308
               

               
Cow position:
               
chr4:53100945-53100660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
191, 37
               

               
Conread position:
               
11-312
               

               
Cow position:
               
chr4:36731341-36731041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
12, 180
               

               
Conread position:
               
11-313
               

               
Cow position:
               
chr4:43148552-43148253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
198, 16
               

               
Conread position:
               
12-308
               

               
Cow position:
               
chr4:8412973-8413272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
16-236
               

               
Cow position:
               
chr4:8892-9109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
33, 48
               

               
Conread position:
               
16-283
               

               
Cow position:
               
chr4:10905328-10905589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
39, 57
               

               
Conread position:
               
16-289
               

               
Cow position:
               
chr4:48396654-48396924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
38, 172
               

               
Conread position:
               
16-308
               

               
Cow position:
               
chr4:10379251-10378959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 42
               

               
Conread position:
               
19-273
               

               
Cow position:
               
chr4:17084202-17084455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
188, 48
               

               
Conread position:
               
19-308
               

               
Cow position:
               
chr4:46591805-46591515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
185, 177
               

               
Conread position:
               
19-308
               

               
Cow position:
               
chr4:51784315-51784029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
19-308
               

               
Cow position:
               
chr4:62983419-62983699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
14, 106
               

               
Conread position:
               
20-308
               

               
Cow position:
               
chr4:20147321-20147037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
31, 173
               

               
Conread position:
               
22-308
               

               
Cow position:
               
chr4:59378045-59377765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
36, 171
               

               
Conread position:
               
24-306
               

               
Cow position:
               
chr4:10056340-10056061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 98
               

               
Conread position:
               
24-308
               

               
Cow position:
               
chr4:19321946-19322232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
211, 35
               

               
Conread position:
               
25-254
               

               
Cow position:
               
chr4:54541507-54541737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
7, 26
               

               
Conread position:
               
27-306
               

               
Cow position:
               
chr4:508779-509050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
257, 168
               

               
Conread position:
               
27-306
               

               
Cow position:
               
chr4:20026976-20027248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 22
               

               
Conread position:
               
28-218
               

               
Cow position:
               
chr4:65131324-65131514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
28-302
               

               
Cow position:
               
chr4:48173262-48172994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
252, 21
               

               
Conread position:
               
28-304
               

               
Cow position:
               
chr4:4827260-4826980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
16, 49
               

               
Conread position:
               
28-306
               

               
Cow position:
               
chr4:12903950-12903671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
137, 176
               

               
Conread position:
               
28-306
               

               
Cow position:
               
chr4:21874932-21874669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 150
               

               
Conread position:
               
28-308
               

               
Cow position:
               
chr4:7808699-7808437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
28-308
               

               
Cow position:
               
chr4:30792094-30791819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
260, 24
               

               
Conread position:
               
28-313
               

               
Cow position:
               
chr4:32726353-32726072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
28-313
               

               
Cow position:
               
chr4:66547639-66547921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
29-249
               

               
Cow position:
               
chr4:44903418-44903194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
166, 29
               

               
Conread position:
               
29-283
               

               
Cow position:
               
chr4:14500119-14500377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
150, 20
               

               
Conread position:
               
29-283
               

               
Cow position:
               
chr4:19578512-19578279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
86, 20
               

               
Conread position:
               
29-305
               

               
Cow position:
               
chr4:1026110-1026371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
29-308
               

               
Cow position:
               
chr4:11871793-11872057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
30, 151
               

               
Conread position:
               
29-308
               

               
Cow position:
               
chr4:33091500-33091230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
20, 41
               

               
Conread position:
               
29-308
               

               
Cow position:
               
chr4:38944133-38944410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 20
               

               
Conread position:
               
29-308
               

               
Cow position:
               
chr4:45685586-45685319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 160
               

               
Conread position:
               
29-308
               

               
Cow position:
               
chr4:47262662-47262383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
41, 50
               

               
Conread position:
               
29-308
               

               
Cow position:
               
chr4:62472204-62471923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
209, 20
               

               
Conread position:
               
30-274
               

               
Cow position:
               
chr4:11380407-11380169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 118
               

               
Conread position:
               
30-308
               

               
Cow position:
               
chr4:42921732-42922001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 102
               

               
Conread position:
               
32-308
               

               
Cow position:
               
chr4:7571534-7571261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
124, 26
               

               
Conread position:
               
33-295
               

               
Cow position:
               
chr4:85819-85554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 139
               

               
Conread position:
               
33-301
               

               
Cow position:
               
chr4:16762605-16762869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
145, 19
               

               
Conread position:
               
34-188
               

               
Cow position:
               
chr4:36744698-36744549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
110, 15
               

               
Conread position:
               
34-308
               

               
Cow position:
               
chr4:3421746-3421478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
25, 205
               

               
Conread position:
               
34-308
               

               
Cow position:
               
chr4:37915216-37915487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 15
               

               
Conread position:
               
34-308
               

               
Cow position:
               
chr4:66172671-66172947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
35-304
               

               
Cow position:
               
chr4:41300879-41301136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
252, 14
               

               
Conread position:
               
36-256
               

               
Cow position:
               
chr4:46566348-46566572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
36-266
               

               
Cow position:
               
chr4:46136871-46136644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
36-290
               

               
Cow position:
               
chr4:214137-213887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
23, 86
               

               
Conread position:
               
36-308
               

               
Cow position:
               
chr4:37935166-37935433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
36-308
               

               
Cow position:
               
chr4:50769643-50769915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 66
               

               
Conread position:
               
38-277
               

               
Cow position:
               
chr4:9925509-9925744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
11, 156
               

               
Conread position:
               
38-308
               

               
Cow position:
               
chr4:13344658-13344397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
13, 174
               

               
Conread position:
               
38-308
               

               
Cow position:
               
chr4:45076957-45077223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
11, 43
               

               
Conread position:
               
38-311
               

               
Cow position:
               
chr4:63095956-63096225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
39-307
               

               
Cow position:
               
chr4:27530233-27529969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 10
               

               
Conread position:
               
40-306
               

               
Cow position:
               
chr4:12591100-12591361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
240, 12
               

               
Conread position:
               
41-306
               

               
Cow position:
               
chr4:24001851-24002113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
226, 49
               

               
Conread position:
               
42-179
               

               
Cow position:
               
chr4:18098949-18099084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
42-246
               

               
Cow position:
               
chr4:49826364-49826166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
42-267
               

               
Cow position:
               
chr4:11610986-11610768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 94
               

               
Conread position:
               
42-292
               

               
Cow position:
               
chr4:1419338-1419089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
42-298
               

               
Cow position:
               
chr4:68234088-68233835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
9, 165
               

               
Conread position:
               
42-306
               

               
Cow position:
               
chr4:19582506-19582764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
158, 7
               

               
Conread position:
               
43-198
               

               
Cow position:
               
chr4:11969566-11969415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
43-306
               

               
Cow position:
               
chr4:56570920-56570658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
233, 149
               

               
Conread position:
               
44-253
               

               
Cow position:
               
chr4:65815596-65815799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
44-282
               

               
Cow position:
               
chr4:65175035-65175261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
44-306
               

               
Cow position:
               
chr4:12127528-12127789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
232, 16
               

               
Conread position:
               
44-308
               

               
Cow position:
               
chr4:28839730-28839476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
259, 86
               

               
Conread position:
               
44-308
               

               
Cow position:
               
chr4:31136868-31136602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 101
               

               
Conread position:
               
47-308
               

               
Cow position:
               
chr4:59785431-59785168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
48-254
               

               
Cow position:
               
chr4:34503403-34503197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
104, 12
               

               
Conread position:
               
48-274
               

               
Cow position:
               
chr4:16513417-16513635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
82, 21
               

               
Conread position:
               
48-274
               

               
Cow position:
               
chr4:56591144-56590926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
48-283
               

               
Cow position:
               
chr4:13668515-13668748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
48-284
               

               
Cow position:
               
chr4:15134092-15134335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
48-306
               

               
Cow position:
               
chr4:43865750-43866005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
205, 21
               

               
Conread position:
               
49-210
               

               
Cow position:
               
chr4:65173211-65173049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 138
               

               
Conread position:
               
49-228
               

               
Cow position:
               
chr4:34509948-34509769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
49-245
               

               
Cow position:
               
chr4:3837383-3837186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
49-248
               

               
Cow position:
               
chr4:19324082-19323884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
49-272
               

               
Cow position:
               
chr4:13026409-13026189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
146, 22
               

               
Conread position:
               
49-283
               

               
Cow position:
               
chr4:45367847-45367612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
49-306
               

               
Cow position:
               
chr4:10732331-10732075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
232, 140
               

               
Conread position:
               
49-306
               

               
Cow position:
               
chr4:25984328-25984079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 135
               

               
Conread position:
               
49-308
               

               
Cow position:
               
chr4:26401062-26400811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
113, 11
               

               
Conread position:
               
49-308
               

               
Cow position:
               
chr4:33096874-33097125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
49-308
               

               
Cow position:
               
chr4:45644210-45644457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
49-308
               

               
Cow position:
               
chr4:51728187-51727927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 154
               

               
Conread position:
               
49-309
               

               
Cow position:
               
chr4:27755194-27755451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
9, 138
               

               
Conread position:
               
50-283
               

               
Cow position:
               
chr4:34699927-34700162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
60, 77
               

               
Conread position:
               
50-283
               

               
Cow position:
               
chr4:48143946-48143706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
26, 156
               

               
Conread position:
               
50-299
               

               
Cow position:
               
chr4:25356211-25356446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 63
               

               
Conread position:
               
50-308
               

               
Cow position:
               
chr4:7430427-7430174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
62, 144
               

               
Conread position:
               
50-308
               

               
Cow position:
               
chr4:13693565-13693823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
50-308
               

               
Cow position:
               
chr4:53208399-53208146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
52-182
               

               
Cow position:
               
chr4:26901432-26901302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
52-214
               

               
Cow position:
               
chr4:13241729-13241570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
52-224
               

               
Cow position:
               
chr4:28701463-28701289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
143, 75
               

               
Conread position:
               
52-235
               

               
Cow position:
               
chr4:54920985-54921164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
52-236
               

               
Cow position:
               
chr4:60719206-60719022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
168, 148
               

               
Conread position:
               
52-243
               

               
Cow position:
               
chr4:1976-1786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
175, 144
               

               
Conread position:
               
52-251
               

               
Cow position:
               
chr4:19102777-19102977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
139, 119
               

               
Conread position:
               
52-272
               

               
Cow position:
               
chr4:22546738-22546951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
52-275
               

               
Cow position:
               
chr4:37675718-37675499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
52-275
               

               
Cow position:
               
chr4:38156983-38157207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
52-276
               

               
Cow position:
               
chr4:12441999-12441776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
173, 42
               

               
Conread position:
               
52-283
               

               
Cow position:
               
chr4:49794764-49794548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
52-289
               

               
Cow position:
               
chr4:52779956-52779722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
24, 147
               

               
Conread position:
               
52-289
               

               
Cow position:
               
chr4:63964886-63965119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
142, 62
               

               
Conread position:
               
52-290
               

               
Cow position:
               
chr4:24481568-24481795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
113, 26
               

               
Conread position:
               
52-293
               

               
Cow position:
               
chr4:19098577-19098334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
104, 199
               

               
Conread position:
               
52-297
               

               
Cow position:
               
chr4:19435360-19435121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
52-297
               

               
Cow position:
               
chr4:49089891-49089651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 101
               

               
Conread position:
               
52-301
               

               
Cow position:
               
chr4:24810346-24810583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
32, 79
               

               
Conread position:
               
52-301
               

               
Cow position:
               
chr4:68387897-68387649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
154, 98
               

               
Conread position:
               
52-304
               

               
Cow position:
               
chr4:21017-20773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
237, 138
               

               
Conread position:
               
52-304
               

               
Cow position:
               
chr4:20157312-20157563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
147, 53
               

               
Conread position:
               
52-305
               

               
Cow position:
               
chr4:19407893-19408146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 53
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr4:43515821-43515579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr4:60897178-60897423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
52-307
               

               
Cow position:
               
chr4:3850656-3850408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr4:46009-45772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr4:4084345-4084597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr4:4320886-4321151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
76, 138
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr4:9815243-9815497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr4:11194290-11194036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
127, 73
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr4:13941561-13941310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
228, 85
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr4:13973865-13974118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
120, 145
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr4:17774245-17774503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr4:19744980-19744736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
151, 67
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr4:20327604-20327859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 110
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr4:22860606-22860861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
122, 85
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr4:25888730-25888979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
228, 35
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr4:28771962-28772216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
136, 172
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr4:29805269-29805519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
228, 84
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr4:36290729-36290479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr4:37704369-37704117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr4:39128642-39128384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
142, 81
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr4:45738370-45738627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
124, 228
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr4:48961381-48961629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr4:49158690-49158934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
245, 65
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr4:61148720-61148444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr4:65950759-65950499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
233, 35
               

               
Conread position:
               
52-313
               

               
Cow position:
               
chr4:8133437-8133693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
232, 8
               

               
Conread position:
               
52-313
               

               
Cow position:
               
chr4:25879495-25879241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
236, 77
               

               
Conread position:
               
52-313
               

               
Cow position:
               
chr4:25973001-25972743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
138, 7
               

               
Conread position:
               
52-313
               

               
Cow position:
               
chr4:34369345-34369607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
44, 39
               

               
Conread position:
               
52-313
               

               
Cow position:
               
chr4:41370834-41371094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
25, 142
               

               
Conread position:
               
52-313
               

               
Cow position:
               
chr4:44782479-44782219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 93
               

               
Conread position:
               
53-254
               

               
Cow position:
               
chr4:51730054-51729857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
31, 37
               

               
Conread position:
               
54-275
               

               
Cow position:
               
chr4:19430468-19430245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
148, 138
               

               
Conread position:
               
54-299
               

               
Cow position:
               
chr4:38952656-38952412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 133
               

               
Conread position:
               
54-306
               

               
Cow position:
               
chr4:22842449-22842200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 183
               

               
Conread position:
               
54-308
               

               
Cow position:
               
chr4:33612259-33612508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
54-308
               

               
Cow position:
               
chr4:47348929-47348678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
54-313
               

               
Cow position:
               
chr4:48409166-48409420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 105
               

               
Conread position:
               
57-180
               

               
Cow position:
               
chr4:60527280-60527157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
57-187
               

               
Cow position:
               
chr4:16221777-16221908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
57-294
               

               
Cow position:
               
chr4:20184802-20184578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
5, 74
               

               
Conread position:
               
57-296
               

               
Cow position:
               
chr4:34641627-34641864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
133, 21
               

               
Conread position:
               
57-297
               

               
Cow position:
               
chr4:44449409-44449642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
57-305
               

               
Cow position:
               
chr4:3283347-3283593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
57-308
               

               
Cow position:
               
chr4:54111841-54111598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
57-308
               

               
Cow position:
               
chr4:61897435-61897685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 145
               

               
Conread position:
               
57-308
               

               
Cow position:
               
chr4:68889461-68889706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
181, 0
               

               
Conread position:
               
57-313
               

               
Cow position:
               
chr4:29291614-29291365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
57-324
               

               
Cow position:
               
chr4:53346431-53346161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 150
               

               
Conread position:
               
58-234
               

               
Cow position:
               
chr4:61235105-61235278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 52
               

               
Conread position:
               
58-248
               

               
Cow position:
               
chr4:19292820-19292631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
58-290
               

               
Cow position:
               
chr4:4319052-4319278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
14, 135
               

               
Conread position:
               
58-306
               

               
Cow position:
               
chr4:2141834-2141598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
134, 5
               

               
Conread position:
               
58-307
               

               
Cow position:
               
chr4:34337173-34337415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
131, 72
               

               
Conread position:
               
58-308
               

               
Cow position:
               
chr4:21391713-21391962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
58-308
               

               
Cow position:
               
chr4:22009959-22010210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
163, 73
               

               
Conread position:
               
58-308
               

               
Cow position:
               
chr4:35982097-35981844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
58-308
               

               
Cow position:
               
chr4:41602948-41602700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
144, 163
               

               
Conread position:
               
58-308
               

               
Cow position:
               
chr4:54191188-54190939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
58-310
               

               
Cow position:
               
chr4:14945161-14944908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 155
               

               
Conread position:
               
59-259
               

               
Cow position:
               
chr4:47510482-47510290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
59-283
               

               
Cow position:
               
chr4:41185822-41186033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
59-283
               

               
Cow position:
               
chr4:66256784-66256562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
59-283
               

               
Cow position:
               
chr4:68764613-68764397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
59-289
               

               
Cow position:
               
chr4:39609815-39609602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
208, 40
               

               
Conread position:
               
59-308
               

               
Cow position:
               
chr4:12049344-12049096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
59-308
               

               
Cow position:
               
chr4:19315910-19316150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
59-308
               

               
Cow position:
               
chr4:22713396-22713640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
69, 49
               

               
Conread position:
               
60-188
               

               
Cow position:
               
chr4:34653773-34653900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
60-271
               

               
Cow position:
               
chr4:69543279-69543071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
60-306
               

               
Cow position:
               
chr4:19314109-19313861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
224, 142
               

               
Conread position:
               
60-306
               

               
Cow position:
               
chr4:30169732-30169970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
10, 48
               

               
Conread position:
               
60-308
               

               
Cow position:
               
chr4:36929406-36929168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
61-233
               

               
Cow position:
               
chr4:48422973-48422801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
61-308
               

               
Cow position:
               
chr4:33433159-33433413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
62-308
               

               
Cow position:
               
chr4:17111779-17112026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 62
               

               
Conread position:
               
63-234
               

               
Cow position:
               
chr4:61478699-61478526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
63-301
               

               
Cow position:
               
chr4:58880867-58881105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
63-308
               

               
Cow position:
               
chr4:5460766-5461011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
10, 179
               

               
Conread position:
               
63-308
               

               
Cow position:
               
chr4:12676893-12676655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
217, 73
               

               
Conread position:
               
63-308
               

               
Cow position:
               
chr4:22344927-22345167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 43
               

               
Conread position:
               
63-312
               

               
Cow position:
               
chr4:55395855-55395607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
217, 41
               

               
Conread position:
               
64-307
               

               
Cow position:
               
chr4:23646769-23646991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
218, 27
               

               
Conread position:
               
64-308
               

               
Cow position:
               
chr4:11099562-11099818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
64-308
               

               
Cow position:
               
chr4:23846958-23847197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
64-308
               

               
Cow position:
               
chr4:54455250-54455492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
64-308
               

               
Cow position:
               
chr4:62771827-62772074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
160, 126
               

               
Conread position:
               
65-250
               

               
Cow position:
               
chr4:60131316-60131131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
68-306
               

               
Cow position:
               
chr4:46393525-46393288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
212, 9
               

               
Conread position:
               
68-307
               

               
Cow position:
               
chr4:21257035-21257273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
13, 183
               

               
Conread position:
               
69-299
               

               
Cow position:
               
chr4:20139429-20139665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
201, 41
               

               
Conread position:
               
71-296
               

               
Cow position:
               
chr4:16799100-16799325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
72-307
               

               
Cow position:
               
chr4:4186205-4185976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
13, 81
               

               
Conread position:
               
72-308
               

               
Cow position:
               
chr4:16601978-16602202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
74-295
               

               
Cow position:
               
chr4:54937977-54937752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 5
               

               
Conread position:
               
76-307
               

               
Cow position:
               
chr4:21232793-21233022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 101
               

               
Conread position:
               
78-307
               

               
Cow position:
               
chr4:34165896-34166126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
53, 38
               

               
Conread position:
               
78-308
               

               
Cow position:
               
chr4:44613084-44612853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 115
               

               
Conread position:
               
78-308
               

               
Cow position:
               
chr4:65432229-65432001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
80-300
               

               
Cow position:
               
chr4:42673253-42673034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
191, 0
               

               
Conread position:
               
80-306
               

               
Cow position:
               
chr4:19597247-19597463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
80-308
               

               
Cow position:
               
chr4:620058-620299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
116, 50
               

               
Conread position:
               
80-308
               

               
Cow position:
               
chr4:11332174-11331943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 126
               

               
Conread position:
               
80-308
               

               
Cow position:
               
chr4:66111994-66112222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
83-273
               

               
Cow position:
               
chr4:5913273-5913462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
83-283
               

               
Cow position:
               
chr4:46183487-46183286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
82, 120
               

               
Conread position:
               
83-308
               

               
Cow position:
               
chr4:21065110-21064889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
83-308
               

               
Cow position:
               
chr4:35939931-35940157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
7, 119
               

               
Conread position:
               
83-308
               

               
Cow position:
               
chr4:51739643-51739858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
83-313
               

               
Cow position:
               
chr4:47730932-47730704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
113, 169
               

               
Conread position:
               
84-236
               

               
Cow position:
               
chr4:19493628-19493475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
84-308
               

               
Cow position:
               
chr4:27632516-27632301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
85-308
               

               
Cow position:
               
chr4:46552265-46552469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
86-306
               

               
Cow position:
               
chr4:30974404-30974193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
86-313
               

               
Cow position:
               
chr4:45711434-45711215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
87-283
               

               
Cow position:
               
chr4:14920059-14919871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
88-255
               

               
Cow position:
               
chr4:45563811-45563646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 87
               

               
Conread position:
               
89-283
               

               
Cow position:
               
chr4:37343197-37342992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 177
               

               
Conread position:
               
89-305
               

               
Cow position:
               
chr4:40918364-40918138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
102, 180
               

               
Conread position:
               
89-308
               

               
Cow position:
               
chr4:16881293-16881512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
52, 11
               

               
Conread position:
               
89-311
               

               
Cow position:
               
chr4:2894099-2893872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
90-308
               

               
Cow position:
               
chr4:9681373-9681151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
91-274
               

               
Cow position:
               
chr4:67466788-67466607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
91-308
               

               
Cow position:
               
chr4:5999129-5999338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
91-308
               

               
Cow position:
               
chr4:24744340-24744558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
91-308
               

               
Cow position:
               
chr4:44973700-44973487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
176, 33
               

               
Conread position:
               
94-308
               

               
Cow position:
               
chr4:8947458-8947244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
94-308
               

               
Cow position:
               
chr4:14470507-14470719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
95-249
               

               
Cow position:
               
chr4:64657236-64657386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
108, 37
               

               
Conread position:
               
95-308
               

               
Cow position:
               
chr4:11021589-11021804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
95-308
               

               
Cow position:
               
chr4:28543552-28543750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
185, 26
               

               
Conread position:
               
95-308
               

               
Cow position:
               
chr4:54930360-54930574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
185, 35
               

               
Conread position:
               
96-308
               

               
Cow position:
               
chr4:27540680-27540472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
67, 128
               

               
Conread position:
               
98-297
               

               
Cow position:
               
chr4:52307564-52307750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
98-308
               

               
Cow position:
               
chr4:9571114-9570900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
94, 35
               

               
Conread position:
               
99-305
               

               
Cow position:
               
chr4:28399360-28399564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
96, 11
               

               
Conread position:
               
100-244
               

               
Cow position:
               
chr4:21866527-21866383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
51, 57
               

               
Conread position:
               
100-257
               

               
Cow position:
               
chr4:34211225-34211068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
100-274
               

               
Cow position:
               
chr4:570849-570681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 85
               

               
Conread position:
               
100-275
               

               
Cow position:
               
chr4:18107103-18107274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
100-279
               

               
Cow position:
               
chr4:2885483-2885662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
100-279
               

               
Cow position:
               
chr4:13043320-13043148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
100-291
               

               
Cow position:
               
chr4:57584185-57584377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
100-291
               

               
Cow position:
               
chr4:59101455-59101648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
14, 102
               

               
Conread position:
               
100-300
               

               
Cow position:
               
chr4:4843187-4843388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 83
               

               
Conread position:
               
100-302
               

               
Cow position:
               
chr4:44258277-44258492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
91, 48
               

               
Conread position:
               
100-305
               

               
Cow position:
               
chr4:15635391-15635594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
100-306
               

               
Cow position:
               
chr4:13256139-13255941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
100-306
               

               
Cow position:
               
chr4:51867049-51866851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
99, 36
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr4:203086-203291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr4:17474496-17474287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
175, 92
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr4:19008103-19007897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
160, 104
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr4:19265630-19265427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
181, 65
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr4:29237987-29238188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
181, 92
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr4:31004352-31004557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
104, 86
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr4:34310402-34310600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
180, 17
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr4:47041372-47041573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
181, 90
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr4:58423743-58423964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
100-313
               

               
Cow position:
               
chr4:50203811-50203597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
5, 9
               

               
Conread position:
               
103-301
               

               
Cow position:
               
chr4:275514-275321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
104-313
               

               
Cow position:
               
chr4:26323793-26323582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 83
               

               
Conread position:
               
105-307
               

               
Cow position:
               
chr4:19142328-19142144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
155, 76
               

               
Conread position:
               
105-308
               

               
Cow position:
               
chr4:20299326-20299125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
94, 7
               

               
Conread position:
               
106-307
               

               
Cow position:
               
chr4:64072304-64072497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
107-283
               

               
Cow position:
               
chr4:59873479-59873307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
108-307
               

               
Cow position:
               
chr4:285691-285500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
176, 37
               

               
Conread position:
               
108-308
               

               
Cow position:
               
chr4:19497217-19497401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
109-308
               

               
Cow position:
               
chr4:47047942-47047744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
115-308
               

               
Cow position:
               
chr4:21516961-21517154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
116-308
               

               
Cow position:
               
chr4:3689745-3689559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
117-287
               

               
Cow position:
               
chr4:32259805-32259973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
168, 75
               

               
Conread position:
               
119-255
               

               
Cow position:
               
chr4:2096360-2096224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-308
               

               
Cow position:
               
chr4:19463534-19463346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
122-298
               

               
Cow position:
               
chr4:11897260-11897438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
122-308
               

               
Cow position:
               
chr4:37619853-37620037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
105, 70
               

               
Conread position:
               
123-256
               

               
Cow position:
               
chr4:2537226-2537095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
123-308
               

               
Cow position:
               
chr4:17124258-17124445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
125-308
               

               
Cow position:
               
chr4:11201852-11201667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 84
               

               
Conread position:
               
125-308
               

               
Cow position:
               
chr4:11671484-11671306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
125-311
               

               
Cow position:
               
chr4:53209269-53209085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
155, 67
               

               
Conread position:
               
127-308
               

               
Cow position:
               
chr4:24458073-24458248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
133-313
               

               
Cow position:
               
chr4:47290102-47289920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
148, 63
               

               
Conread position:
               
137-297
               

               
Cow position:
               
chr4:26011870-26011714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
144-306
               

               
Cow position:
               
chr4:33357949-33357787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
144-308
               

               
Cow position:
               
chr4:479995-480154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
144-308
               

               
Cow position:
               
chr4:10412395-10412229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 106
               

               
Conread position:
               
144-308
               

               
Cow position:
               
chr4:11901548-11901712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
136, 58
               

               
Conread position:
               
144-308
               

               
Cow position:
               
chr4:27687940-27687774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
146-301
               

               
Cow position:
               
chr4:22215642-22215794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
146-308
               

               
Cow position:
               
chr4:27291942-27292105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
147-306
               

               
Cow position:
               
chr4:34924680-34924836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
133, 55
               

               
Conread position:
               
148-301
               

               
Cow position:
               
chr4:5047331-5047480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
128, 44
               

               
Conread position:
               
148-308
               

               
Cow position:
               
chr4:48137921-48137761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
132, 48
               

               
Conread position:
               
150-308
               

               
Cow position:
               
chr4:19438472-19438311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
150-308
               

               
Cow position:
               
chr4:43369839-43370003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
153-306
               

               
Cow position:
               
chr4:53999505-53999657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
5, 19
               

               
Conread position:
               
155-308
               

               
Cow position:
               
chr4:36725045-36724889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
161-305
               

               
Cow position:
               
chr4:52166855-52166999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
161-308
               

               
Cow position:
               
chr4:18576774-18576922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 130
               

               
Conread position:
               
164-273
               

               
Cow position:
               
chr4:20593746-20593637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
205-308
               

               
Cow position:
               
chr4:44072812-44072915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.