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Cow genome map

           
Conread name:
           
rcsp04b_a24.y1
        

               
Conread position:
               
1-156
               

               
Cow position:
               
chr6:41657460-41657315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr6:58725562-58725358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr6:63066032-63065798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
117, 194
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr6:60265973-60266212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
54, 184
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr6:36920780-36921017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr6:68816366-68816117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr6:693950-694223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
92, 22
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr6:33509984-33509713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
178, 44
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr6:68376120-68376399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
24, 17
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr6:52478216-52478501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 22
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr6:6401162-6400863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 137
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr6:26915523-26915235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 23
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr6:13687621-13687909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 22
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr6:6965199-6965490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr6:19264303-19264597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr6:38640429-38640130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
180, 25
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr6:5609247-5609542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr6:10105785-10106094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 22
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr6:15243457-15243154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 50
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr6:38853461-38853756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
244, 23
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr6:47305537-47305237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
203, 40
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr6:51581060-51581355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 26
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr6:57546031-57546316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr6:61168960-61168673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
9, 182
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr6:2547450-2547139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 23
               

               
Conread position:
               
2-200
               

               
Cow position:
               
chr6:58304610-58304419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
68, 39
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr6:1871003-1871195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
2-206
               

               
Cow position:
               
chr6:47783061-47782860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
2-243
               

               
Cow position:
               
chr6:67728572-67728333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
193, 40
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr6:67451174-67451415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr6:62437611-62437370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr6:56986454-56986702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
202, 42
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr6:3595988-3595723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
167, 40
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr6:21004874-21004606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 42
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr6:52413056-52412793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr6:21399559-21399823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr6:445522-445244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr6:21514412-21514690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
187, 11
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr6:41375964-41375692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr6:13565281-13565000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
195, 21
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr6:16746540-16746246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
274, 39
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:29485277-29484995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
125, 21
               

               
Conread position:
               
2-306
               

               
Cow position:
               
chr6:6063098-6063391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
282, 21
               

               
Conread position:
               
2-306
               

               
Cow position:
               
chr6:15937658-15937951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
187, 42
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr6:3952715-3952417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr6:4691771-4692082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
40, 66
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr6:5113853-5114147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr6:8125523-8125226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
279, 28
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr6:11246962-11246661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
111, 37
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr6:15243033-15242734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
162, 42
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr6:15305765-15305479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr6:15446999-15447306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
191, 50
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr6:17313932-17313632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr6:17997123-17997417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
282, 20
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr6:18048827-18049132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 14
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr6:19996809-19996516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
278, 43
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr6:38207291-38207593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 51
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr6:47356020-47355722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
45, 10
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr6:48988628-48988335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
279, 40
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr6:50984419-50984123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
277, 42
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr6:51835592-51835295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
278, 16
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr6:55282096-55282388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
101, 27
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr6:61631411-61631711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
85, 39
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr6:63251727-63252025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
276, 43
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr6:48282189-48281892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
279, 40
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr6:10225456-10225746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr6:43345246-43345564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
204, 42
               

               
Conread position:
               
3-288
               

               
Cow position:
               
chr6:12091793-12092075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
44, 35
               

               
Conread position:
               
4-225
               

               
Cow position:
               
chr6:42567688-42567472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
102, 40
               

               
Conread position:
               
4-259
               

               
Cow position:
               
chr6:48469203-48468946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr6:19045820-19045558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr6:4468958-4468691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
161, 32
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr6:8600200-8599928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 130
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr6:16103000-16103271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
4-294
               

               
Cow position:
               
chr6:24110476-24110196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
242, 40
               

               
Conread position:
               
4-307
               

               
Cow position:
               
chr6:36189892-36189596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
197, 26
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr6:13040646-13040355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr6:38610166-38609866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
5-245
               

               
Cow position:
               
chr6:32516912-32517139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
5-299
               

               
Cow position:
               
chr6:55545981-55546268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
185, 36
               

               
Conread position:
               
7-313
               

               
Cow position:
               
chr6:45388515-45388223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
156, 38
               

               
Conread position:
               
8-270
               

               
Cow position:
               
chr6:24536338-24536606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
172, 44
               

               
Conread position:
               
8-288
               

               
Cow position:
               
chr6:5330602-5330332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
60, 34
               

               
Conread position:
               
8-298
               

               
Cow position:
               
chr6:37332310-37332015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 221
               

               
Conread position:
               
8-308
               

               
Cow position:
               
chr6:24781363-24781661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
36, 55
               

               
Conread position:
               
8-308
               

               
Cow position:
               
chr6:28148446-28148146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
140, 36
               

               
Conread position:
               
8-308
               

               
Cow position:
               
chr6:35842848-35842548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
195, 28
               

               
Conread position:
               
8-308
               

               
Cow position:
               
chr6:67951146-67950851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
39, 117
               

               
Conread position:
               
9-229
               

               
Cow position:
               
chr6:26155334-26155128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
9-275
               

               
Cow position:
               
chr6:67643502-67643760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
9-308
               

               
Cow position:
               
chr6:19695996-19695703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
231, 33
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr6:17548777-17549083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
37, 20
               

               
Conread position:
               
11-272
               

               
Cow position:
               
chr6:61142366-61142630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
15, 188
               

               
Conread position:
               
13-274
               

               
Cow position:
               
chr6:9302530-9302784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
251, 39
               

               
Conread position:
               
16-272
               

               
Cow position:
               
chr6:28178768-28179012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
16-274
               

               
Cow position:
               
chr6:37199353-37199598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
180, 33
               

               
Conread position:
               
18-194
               

               
Cow position:
               
chr6:61569813-61569642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
19-258
               

               
Cow position:
               
chr6:32809467-32809224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
19-297
               

               
Cow position:
               
chr6:120427-120152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
229, 30
               

               
Conread position:
               
19-308
               

               
Cow position:
               
chr6:7130696-7130982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
125, 28
               

               
Conread position:
               
19-308
               

               
Cow position:
               
chr6:8209422-8209693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
19-308
               

               
Cow position:
               
chr6:25407206-25407494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 66
               

               
Conread position:
               
19-308
               

               
Cow position:
               
chr6:60819694-60819413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
261, 33
               

               
Conread position:
               
24-273
               

               
Cow position:
               
chr6:36284422-36284175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 48
               

               
Conread position:
               
24-301
               

               
Cow position:
               
chr6:9736482-9736739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
23, 29
               

               
Conread position:
               
24-308
               

               
Cow position:
               
chr6:23696179-23695892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 23
               

               
Conread position:
               
24-308
               

               
Cow position:
               
chr6:46865413-46865695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
252, 12
               

               
Conread position:
               
24-308
               

               
Cow position:
               
chr6:66531643-66531923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
25-252
               

               
Cow position:
               
chr6:3351210-3350973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
25-308
               

               
Cow position:
               
chr6:58597324-58597606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 209
               

               
Conread position:
               
27-302
               

               
Cow position:
               
chr6:60516999-60516732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
271, 22
               

               
Conread position:
               
27-308
               

               
Cow position:
               
chr6:21869473-21869750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
28-274
               

               
Cow position:
               
chr6:35993758-35993518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
28-289
               

               
Cow position:
               
chr6:23465860-23466112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
28-305
               

               
Cow position:
               
chr6:6343606-6343327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
88, 165
               

               
Conread position:
               
28-306
               

               
Cow position:
               
chr6:16764469-16764752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 174
               

               
Conread position:
               
28-308
               

               
Cow position:
               
chr6:1499821-1499538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 64
               

               
Conread position:
               
28-308
               

               
Cow position:
               
chr6:5302244-5302511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
208, 98
               

               
Conread position:
               
28-308
               

               
Cow position:
               
chr6:34475386-34475654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
251, 6
               

               
Conread position:
               
29-283
               

               
Cow position:
               
chr6:10176126-10176373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
29, 166
               

               
Conread position:
               
29-295
               

               
Cow position:
               
chr6:25614917-25615193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 20
               

               
Conread position:
               
29-297
               

               
Cow position:
               
chr6:61269484-61269219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
29-308
               

               
Cow position:
               
chr6:17414273-17414550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 19
               

               
Conread position:
               
29-308
               

               
Cow position:
               
chr6:48112369-48112097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
32-173
               

               
Cow position:
               
chr6:23938231-23938091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr6:14914064-14914347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
25, 128
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr6:46859998-46860266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr6:65871204-65870926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 21
               

               
Conread position:
               
33-313
               

               
Cow position:
               
chr6:36202990-36202721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 98
               

               
Conread position:
               
34-257
               

               
Cow position:
               
chr6:55475428-55475202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
35-308
               

               
Cow position:
               
chr6:50577687-50577422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
36-179
               

               
Cow position:
               
chr6:18422825-18422965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
36-270
               

               
Cow position:
               
chr6:60468406-60468173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 16
               

               
Conread position:
               
36-274
               

               
Cow position:
               
chr6:16287893-16288120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 24
               

               
Conread position:
               
36-283
               

               
Cow position:
               
chr6:46558224-46557977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
165, 42
               

               
Conread position:
               
36-297
               

               
Cow position:
               
chr6:9718745-9719015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
13, 119
               

               
Conread position:
               
36-308
               

               
Cow position:
               
chr6:8637447-8637173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 21
               

               
Conread position:
               
37-308
               

               
Cow position:
               
chr6:47520219-47519948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
161, 15
               

               
Conread position:
               
38-251
               

               
Cow position:
               
chr6:55417363-55417572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
38-285
               

               
Cow position:
               
chr6:46173093-46173331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
38-296
               

               
Cow position:
               
chr6:67617782-67618045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
24, 42
               

               
Conread position:
               
39-217
               

               
Cow position:
               
chr6:57287497-57287673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
40-308
               

               
Cow position:
               
chr6:53652201-53651941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
40-308
               

               
Cow position:
               
chr6:54573421-54573141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
150, 12
               

               
Conread position:
               
42-208
               

               
Cow position:
               
chr6:1002104-1002266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
42-306
               

               
Cow position:
               
chr6:11169862-11169600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 10
               

               
Conread position:
               
42-306
               

               
Cow position:
               
chr6:50976209-50975958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
42-308
               

               
Cow position:
               
chr6:36196368-36196112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
42-313
               

               
Cow position:
               
chr6:59069457-59069731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
16, 192
               

               
Conread position:
               
43-235
               

               
Cow position:
               
chr6:19259182-19259374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
165, 9
               

               
Conread position:
               
44-283
               

               
Cow position:
               
chr6:58608283-58608516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
5, 144
               

               
Conread position:
               
44-301
               

               
Cow position:
               
chr6:63720358-63720100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 13
               

               
Conread position:
               
44-308
               

               
Cow position:
               
chr6:49398461-49398716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
45-251
               

               
Cow position:
               
chr6:2078656-2078865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
45-308
               

               
Cow position:
               
chr6:6264810-6264541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
83, 18
               

               
Conread position:
               
45-308
               

               
Cow position:
               
chr6:9219425-9219171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 85
               

               
Conread position:
               
45-308
               

               
Cow position:
               
chr6:28976881-28977137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
150, 201
               

               
Conread position:
               
45-308
               

               
Cow position:
               
chr6:60740171-60739913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
239, 7
               

               
Conread position:
               
45-314
               

               
Cow position:
               
chr6:54809232-54809499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
165, 7
               

               
Conread position:
               
46-289
               

               
Cow position:
               
chr6:22985697-22985941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
46-308
               

               
Cow position:
               
chr6:54132968-54132715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
133, 11
               

               
Conread position:
               
48-301
               

               
Cow position:
               
chr6:51526642-51526396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
237, 12
               

               
Conread position:
               
48-308
               

               
Cow position:
               
chr6:12551426-12551168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
22, 90
               

               
Conread position:
               
48-308
               

               
Cow position:
               
chr6:14949325-14949581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 32
               

               
Conread position:
               
49-229
               

               
Cow position:
               
chr6:18903897-18904076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
49-244
               

               
Cow position:
               
chr6:66570595-66570399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
49-274
               

               
Cow position:
               
chr6:18117895-18118120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
151, 89
               

               
Conread position:
               
49-297
               

               
Cow position:
               
chr6:35436149-35435904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
231, 212
               

               
Conread position:
               
49-298
               

               
Cow position:
               
chr6:10487740-10487495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
49-298
               

               
Cow position:
               
chr6:17245463-17245698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
106, 40
               

               
Conread position:
               
49-301
               

               
Cow position:
               
chr6:66375177-66375425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 144
               

               
Conread position:
               
49-302
               

               
Cow position:
               
chr6:53519469-53519720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
121, 136
               

               
Conread position:
               
49-306
               

               
Cow position:
               
chr6:26728378-26728625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
208, 23
               

               
Conread position:
               
49-306
               

               
Cow position:
               
chr6:65264391-65264639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
235, 87
               

               
Conread position:
               
49-308
               

               
Cow position:
               
chr6:9452614-9452871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
50, 162
               

               
Conread position:
               
49-308
               

               
Cow position:
               
chr6:32287788-32287536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 8
               

               
Conread position:
               
50-235
               

               
Cow position:
               
chr6:41655888-41656073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
50-283
               

               
Cow position:
               
chr6:51969230-51968990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
162, 91
               

               
Conread position:
               
50-308
               

               
Cow position:
               
chr6:7119465-7119712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
50-308
               

               
Cow position:
               
chr6:18988363-18988111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
26, 87
               

               
Conread position:
               
50-308
               

               
Cow position:
               
chr6:36470408-36470670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
138, 132
               

               
Conread position:
               
52-188
               

               
Cow position:
               
chr6:30024037-30023901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
52-189
               

               
Cow position:
               
chr6:1866882-1866747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
52-194
               

               
Cow position:
               
chr6:54471780-54471921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
99, 78
               

               
Conread position:
               
52-214
               

               
Cow position:
               
chr6:67805863-67806027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
52-227
               

               
Cow position:
               
chr6:53090160-53089986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
52-229
               

               
Cow position:
               
chr6:62056766-62056589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
52-240
               

               
Cow position:
               
chr6:49437485-49437298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
52-249
               

               
Cow position:
               
chr6:55535600-55535792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
52-255
               

               
Cow position:
               
chr6:16352202-16352396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
52-274
               

               
Cow position:
               
chr6:33929395-33929618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
52-278
               

               
Cow position:
               
chr6:29248629-29248419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
52-280
               

               
Cow position:
               
chr6:17068496-17068723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
52-283
               

               
Cow position:
               
chr6:2623925-2623705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
52-283
               

               
Cow position:
               
chr6:5095390-5095624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
117, 143
               

               
Conread position:
               
52-283
               

               
Cow position:
               
chr6:38441324-38441099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
52-289
               

               
Cow position:
               
chr6:11830339-11830112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
158, 26
               

               
Conread position:
               
52-291
               

               
Cow position:
               
chr6:143223-143454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
233, 97
               

               
Conread position:
               
52-294
               

               
Cow position:
               
chr6:6067549-6067780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
24, 141
               

               
Conread position:
               
52-301
               

               
Cow position:
               
chr6:42565839-42565593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
236, 26
               

               
Conread position:
               
52-301
               

               
Cow position:
               
chr6:44194398-44194637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
52-302
               

               
Cow position:
               
chr6:63047744-63047481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
52-305
               

               
Cow position:
               
chr6:17794612-17794855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
228, 140
               

               
Conread position:
               
52-305
               

               
Cow position:
               
chr6:37149341-37149088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
228, 140
               

               
Conread position:
               
52-305
               

               
Cow position:
               
chr6:40032342-40032094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
52-305
               

               
Cow position:
               
chr6:53841354-53841598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr6:7128252-7128502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
147, 20
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr6:9008460-9008711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr6:16316468-16316206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
17, 27
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr6:35103176-35103432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
110, 106
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr6:46465973-46465723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr6:61524053-61524301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
52-307
               

               
Cow position:
               
chr6:53024653-53024896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
52-307
               

               
Cow position:
               
chr6:53460415-53460673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr6:582121-582373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
21, 27
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr6:8966249-8965991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 228
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr6:16191823-16191567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
142, 61
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr6:19681373-19681625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
140, 180
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr6:24468244-24468495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
222, 125
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr6:31535416-31535669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
17, 211
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr6:38218818-38218570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr6:45690458-45690691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr6:47575058-47574803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 149
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr6:47799445-47799189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
228, 155
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr6:54867669-54867411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr6:54990849-54991102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 139
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr6:64432090-64431837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
79, 218
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr6:67214901-67214642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
134, 168
               

               
Conread position:
               
52-313
               

               
Cow position:
               
chr6:36652573-36652312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
138, 26
               

               
Conread position:
               
53-305
               

               
Cow position:
               
chr6:49002589-49002833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
228, 88
               

               
Conread position:
               
53-308
               

               
Cow position:
               
chr6:29210651-29210397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
17, 108
               

               
Conread position:
               
54-254
               

               
Cow position:
               
chr6:31078719-31078920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
97, 19
               

               
Conread position:
               
54-290
               

               
Cow position:
               
chr6:20929364-20929600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
163, 37
               

               
Conread position:
               
54-307
               

               
Cow position:
               
chr6:47640283-47640534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
54-308
               

               
Cow position:
               
chr6:7989264-7989514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 140
               

               
Conread position:
               
54-308
               

               
Cow position:
               
chr6:24031526-24031277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
135, 76
               

               
Conread position:
               
54-308
               

               
Cow position:
               
chr6:56850170-56849910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
8, 37
               

               
Conread position:
               
54-308
               

               
Cow position:
               
chr6:59603058-59603309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 214
               

               
Conread position:
               
54-315
               

               
Cow position:
               
chr6:17090748-17090490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
150, 24
               

               
Conread position:
               
55-171
               

               
Cow position:
               
chr6:5601847-5601735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
55-251
               

               
Cow position:
               
chr6:32853336-32853141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
55-308
               

               
Cow position:
               
chr6:60350143-60350397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
56-301
               

               
Cow position:
               
chr6:44867395-44867636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
229, 127
               

               
Conread position:
               
57-209
               

               
Cow position:
               
chr6:58459867-58459717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
57-306
               

               
Cow position:
               
chr6:37634942-37634684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
87, 11
               

               
Conread position:
               
57-308
               

               
Cow position:
               
chr6:21231672-21231429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
7, 134
               

               
Conread position:
               
57-308
               

               
Cow position:
               
chr6:57571626-57571375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 135
               

               
Conread position:
               
57-310
               

               
Cow position:
               
chr6:38771427-38771182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
58-258
               

               
Cow position:
               
chr6:60144052-60144251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
122, 139
               

               
Conread position:
               
58-304
               

               
Cow position:
               
chr6:16423847-16423602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 47
               

               
Conread position:
               
59-256
               

               
Cow position:
               
chr6:68652206-68652403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
59-273
               

               
Cow position:
               
chr6:7189974-7190186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
59-274
               

               
Cow position:
               
chr6:54490592-54490803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
59-279
               

               
Cow position:
               
chr6:67282039-67281824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
59-283
               

               
Cow position:
               
chr6:23401848-23402067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
59-289
               

               
Cow position:
               
chr6:32268743-32268959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
59-290
               

               
Cow position:
               
chr6:35990089-35990317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
69, 135
               

               
Conread position:
               
59-290
               

               
Cow position:
               
chr6:37463167-37462938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
139, 181
               

               
Conread position:
               
59-297
               

               
Cow position:
               
chr6:21736748-21736977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
135, 19
               

               
Conread position:
               
59-306
               

               
Cow position:
               
chr6:38641637-38641394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
140, 62
               

               
Conread position:
               
59-306
               

               
Cow position:
               
chr6:52901383-52901134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
87, 143
               

               
Conread position:
               
59-308
               

               
Cow position:
               
chr6:20196158-20196395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
59-308
               

               
Cow position:
               
chr6:32122053-32121809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 172
               

               
Conread position:
               
59-308
               

               
Cow position:
               
chr6:60667555-60667316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
221, 37
               

               
Conread position:
               
59-313
               

               
Cow position:
               
chr6:34196004-34196257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 149
               

               
Conread position:
               
59-313
               

               
Cow position:
               
chr6:57164570-57164319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
216, 19
               

               
Conread position:
               
60-289
               

               
Cow position:
               
chr6:31526190-31525963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
107, 119
               

               
Conread position:
               
60-305
               

               
Cow position:
               
chr6:51675051-51674812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
221, 16
               

               
Conread position:
               
60-308
               

               
Cow position:
               
chr6:1886523-1886766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
221, 82
               

               
Conread position:
               
60-308
               

               
Cow position:
               
chr6:4864403-4864650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
60-308
               

               
Cow position:
               
chr6:35613273-35613516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
63, 198
               

               
Conread position:
               
60-308
               

               
Cow position:
               
chr6:58370894-58370651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
145, 54
               

               
Conread position:
               
60-308
               

               
Cow position:
               
chr6:66874493-66874249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
61-304
               

               
Cow position:
               
chr6:45064874-45065112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
61-310
               

               
Cow position:
               
chr6:15300689-15300923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
63-283
               

               
Cow position:
               
chr6:66131447-66131229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
161, 78
               

               
Conread position:
               
63-297
               

               
Cow position:
               
chr6:19292942-19292707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
116, 132
               

               
Conread position:
               
63-308
               

               
Cow position:
               
chr6:8787896-8788140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
214, 156
               

               
Conread position:
               
63-308
               

               
Cow position:
               
chr6:20097818-20098066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
63-308
               

               
Cow position:
               
chr6:59718937-59718694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
128, 70
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr6:69500602-69500415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
64-268
               

               
Cow position:
               
chr6:59770364-59770165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
64-308
               

               
Cow position:
               
chr6:4383618-4383384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
65-274
               

               
Cow position:
               
chr6:12845514-12845317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
153, 43
               

               
Conread position:
               
65-296
               

               
Cow position:
               
chr6:17333915-17334146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
126, 12
               

               
Conread position:
               
65-308
               

               
Cow position:
               
chr6:38614951-38614717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
131, 65
               

               
Conread position:
               
65-308
               

               
Cow position:
               
chr6:56843293-56843054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
142, 65
               

               
Conread position:
               
67-295
               

               
Cow position:
               
chr6:50467271-50467046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
216, 10
               

               
Conread position:
               
68-300
               

               
Cow position:
               
chr6:55209692-55209462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
213, 9
               

               
Conread position:
               
68-308
               

               
Cow position:
               
chr6:35471375-35471621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
69-241
               

               
Cow position:
               
chr6:54082854-54083026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
73-304
               

               
Cow position:
               
chr6:23247836-23248057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
123, 5
               

               
Conread position:
               
74-282
               

               
Cow position:
               
chr6:55205180-55205388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 5
               

               
Conread position:
               
74-308
               

               
Cow position:
               
chr6:35726223-35725993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
148, 5
               

               
Conread position:
               
77-284
               

               
Cow position:
               
chr6:15022420-15022626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
77-308
               

               
Cow position:
               
chr6:54036016-54036237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
88, 77
               

               
Conread position:
               
78-308
               

               
Cow position:
               
chr6:54368778-54369002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
198, 114
               

               
Conread position:
               
78-308
               

               
Cow position:
               
chr6:61608638-61608409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
80-308
               

               
Cow position:
               
chr6:130039-130263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
80-308
               

               
Cow position:
               
chr6:899169-899392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
83-279
               

               
Cow position:
               
chr6:54208014-54208210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
83-296
               

               
Cow position:
               
chr6:60673686-60673479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
113, 57
               

               
Conread position:
               
84-306
               

               
Cow position:
               
chr6:28318517-28318302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 46
               

               
Conread position:
               
84-308
               

               
Cow position:
               
chr6:12542810-12543035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
86-306
               

               
Cow position:
               
chr6:60118268-60118048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
198, 106
               

               
Conread position:
               
89-308
               

               
Cow position:
               
chr6:3081001-3081232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 169
               

               
Conread position:
               
89-308
               

               
Cow position:
               
chr6:29240054-29239837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
190, 32
               

               
Conread position:
               
89-308
               

               
Cow position:
               
chr6:30974157-30973950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
90-308
               

               
Cow position:
               
chr6:60783984-60783766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
182, 118
               

               
Conread position:
               
91-235
               

               
Cow position:
               
chr6:12197293-12197148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
91-251
               

               
Cow position:
               
chr6:28972923-28973080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
91-308
               

               
Cow position:
               
chr6:54365215-54365433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
192, 0
               

               
Conread position:
               
92-308
               

               
Cow position:
               
chr6:58074160-58073946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
103, 55
               

               
Conread position:
               
94-273
               

               
Cow position:
               
chr6:37395291-37395475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
94-289
               

               
Cow position:
               
chr6:16700371-16700181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
189, 89
               

               
Conread position:
               
94-305
               

               
Cow position:
               
chr6:63298921-63299132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
207, 108
               

               
Conread position:
               
94-307
               

               
Cow position:
               
chr6:40713393-40713602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
191, 104
               

               
Conread position:
               
94-308
               

               
Cow position:
               
chr6:25008829-25008612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
35, 132
               

               
Conread position:
               
94-308
               

               
Cow position:
               
chr6:45596422-45596640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
95-277
               

               
Cow position:
               
chr6:22502802-22502980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
95-279
               

               
Cow position:
               
chr6:16261887-16261713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
95-305
               

               
Cow position:
               
chr6:55763962-55763754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
184, 49
               

               
Conread position:
               
95-306
               

               
Cow position:
               
chr6:377234-377029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 92
               

               
Conread position:
               
95-306
               

               
Cow position:
               
chr6:27239897-27240106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
96-305
               

               
Cow position:
               
chr6:12338101-12337885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
100-250
               

               
Cow position:
               
chr6:31806824-31806978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
100-269
               

               
Cow position:
               
chr6:5845067-5845235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
100-270
               

               
Cow position:
               
chr6:17704935-17704758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
100-274
               

               
Cow position:
               
chr6:54600452-54600278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
94, 103
               

               
Conread position:
               
100-277
               

               
Cow position:
               
chr6:6724609-6724431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
120, 34
               

               
Conread position:
               
100-283
               

               
Cow position:
               
chr6:31261098-31260928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
100-283
               

               
Cow position:
               
chr6:61515084-61515268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
100-297
               

               
Cow position:
               
chr6:1371122-1371321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
133, 109
               

               
Conread position:
               
100-297
               

               
Cow position:
               
chr6:60850276-60850477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
55, 98
               

               
Conread position:
               
100-300
               

               
Cow position:
               
chr6:54430934-54430729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
88, 114
               

               
Conread position:
               
100-304
               

               
Cow position:
               
chr6:62929599-62929398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
160, 74
               

               
Conread position:
               
100-307
               

               
Cow position:
               
chr6:8562824-8562619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
100-307
               

               
Cow position:
               
chr6:50747101-50746883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
100-307
               

               
Cow position:
               
chr6:60442513-60442317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr6:16266828-16266617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
105, 92
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr6:20157437-20157227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
99, 92
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr6:52248026-52248233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 94
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr6:53178733-53178536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
181, 24
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr6:60859197-60859404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
140, 65
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr6:61113871-61113652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
91, 57
               

               
Conread position:
               
102-273
               

               
Cow position:
               
chr6:7170246-7170414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
32, 93
               

               
Conread position:
               
102-289
               

               
Cow position:
               
chr6:28283963-28283783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
102-294
               

               
Cow position:
               
chr6:48170040-48169857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
178, 90
               

               
Conread position:
               
103-306
               

               
Cow position:
               
chr6:21456583-21456788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
112, 5
               

               
Conread position:
               
103-308
               

               
Cow position:
               
chr6:4559204-4559407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
182, 38
               

               
Conread position:
               
104-308
               

               
Cow position:
               
chr6:46292248-46292446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
172, 50
               

               
Conread position:
               
106-271
               

               
Cow position:
               
chr6:67615332-67615496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
106-279
               

               
Cow position:
               
chr6:36493443-36493622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
106-308
               

               
Cow position:
               
chr6:1770100-1770297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
177, 86
               

               
Conread position:
               
107-288
               

               
Cow position:
               
chr6:54364895-54365085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
107-308
               

               
Cow position:
               
chr6:62924899-62925099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
38, 87
               

               
Conread position:
               
108-272
               

               
Cow position:
               
chr6:1944809-1944645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
98, 39
               

               
Conread position:
               
111-308
               

               
Cow position:
               
chr6:24962238-24962047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 92
               

               
Conread position:
               
111-308
               

               
Cow position:
               
chr6:57405032-57405231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
173, 81
               

               
Conread position:
               
112-306
               

               
Cow position:
               
chr6:8804439-8804630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
112-308
               

               
Cow position:
               
chr6:11192372-11192568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
88, 166
               

               
Conread position:
               
112-313
               

               
Cow position:
               
chr6:44099178-44098977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
98, 22
               

               
Conread position:
               
113-308
               

               
Cow position:
               
chr6:12829134-12829325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
85, 107
               

               
Conread position:
               
117-227
               

               
Cow position:
               
chr6:33865033-33865140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
117-308
               

               
Cow position:
               
chr6:37376427-37376619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
79, 183
               

               
Conread position:
               
121-308
               

               
Cow position:
               
chr6:49410614-49410793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
122-313
               

               
Cow position:
               
chr6:44984415-44984222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 73
               

               
Conread position:
               
124-283
               

               
Cow position:
               
chr6:19013151-19012990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
124-308
               

               
Cow position:
               
chr6:21542403-21542218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 79
               

               
Conread position:
               
125-308
               

               
Cow position:
               
chr6:416187-415996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 69
               

               
Conread position:
               
127-308
               

               
Cow position:
               
chr6:18961439-18961618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
128-308
               

               
Cow position:
               
chr6:68049507-68049333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
147, 64
               

               
Conread position:
               
134-283
               

               
Cow position:
               
chr6:34076100-34075950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 59
               

               
Conread position:
               
135-308
               

               
Cow position:
               
chr6:38234028-38233856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
136-313
               

               
Cow position:
               
chr6:36928729-36928548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
137-308
               

               
Cow position:
               
chr6:6673169-6673000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
143, 53
               

               
Conread position:
               
137-308
               

               
Cow position:
               
chr6:60239328-60239491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
143, 55
               

               
Conread position:
               
142-308
               

               
Cow position:
               
chr6:19351096-19351256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
144-305
               

               
Cow position:
               
chr6:16411251-16411091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
136, 48
               

               
Conread position:
               
146-308
               

               
Cow position:
               
chr6:25773327-25773485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
61, 107
               

               
Conread position:
               
147-308
               

               
Cow position:
               
chr6:53731581-53731419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
147-308
               

               
Cow position:
               
chr6:61137432-61137273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
148-308
               

               
Cow position:
               
chr6:45160242-45160396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
148-308
               

               
Cow position:
               
chr6:53711171-53711014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
150-308
               

               
Cow position:
               
chr6:49685639-49685483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
155-306
               

               
Cow position:
               
chr6:20230777-20230931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
156-308
               

               
Cow position:
               
chr6:48344381-48344230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
157-308
               

               
Cow position:
               
chr6:24515151-24515295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
48, 35
               

               
Conread position:
               
158-307
               

               
Cow position:
               
chr6:357840-357991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
159-308
               

               
Cow position:
               
chr6:18968735-18968881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
202-308
               

               
Cow position:
               
chr6:15922995-15923101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
203-308
               

               
Cow position:
               
chr6:32210625-32210730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.