Cow genome map

Conread name: rcsp04b_a24.y1

Conread position: 1-137
Cow position: chr9:34264956-34265097 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 1-151
Cow position: chr9:19771235-19771378 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 1-177
Cow position: chr9:22165843-22165671 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 1-185
Cow position: chr9:59699683-59699497 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 1-194
Cow position: chr9:5104536-5104344 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 115, 0

Conread position: 1-205
Cow position: chr9:57131370-57131565 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 1-233
Cow position: chr9:17840805-17840579 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 197, 23

Conread position: 1-239
Cow position: chr9:29195158-29194921 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 219, 0

Conread position: 1-251
Cow position: chr9:23956103-23955870 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 1-273
Cow position: chr9:13744060-13743797 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 95, 47

Conread position: 1-274
Cow position: chr9:21460280-21460016 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 202, 27

Conread position: 1-294
Cow position: chr9:43757415-43757694 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 220
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 141, 21

Conread position: 1-295
Cow position: chr9:52267888-52267599 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 46, 52

Conread position: 1-296
Cow position: chr9:55795632-55795915 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 185, 37

Conread position: 1-298
Cow position: chr9:26345088-26344808 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-301
Cow position: chr9:12910526-12910238 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 22, 0

Conread position: 1-301
Cow position: chr9:19034228-19034504 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 279, 44

Conread position: 1-301
Cow position: chr9:28747644-28747360 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-304
Cow position: chr9:29824890-29825203 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 211
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 46, 131

Conread position: 1-306
Cow position: chr9:36491030-36490723 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 41

Conread position: 1-308
Cow position: chr9:10118792-10118494 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 219
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 24, 82

Conread position: 1-308
Cow position: chr9:10144611-10144305 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 131

Conread position: 1-308
Cow position: chr9:13169791-13169495 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 1-308
Cow position: chr9:13205698-13205397 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 216
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 29, 44

Conread position: 1-308
Cow position: chr9:23388806-23388507 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 52

Conread position: 1-308
Cow position: chr9:24887079-24887369 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-308
Cow position: chr9:34375053-34374761 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 26, 0

Conread position: 1-308
Cow position: chr9:41728134-41728427 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 22

Conread position: 1-308
Cow position: chr9:45285665-45285360 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 29

Conread position: 1-308
Cow position: chr9:47446144-47445856 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 206
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 278, 26

Conread position: 1-308
Cow position: chr9:60395175-60394880 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 205
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 1-309
Cow position: chr9:39011596-39011305 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 21

Conread position: 1-312
Cow position: chr9:26279298-26279002 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 2-197
Cow position: chr9:5342371-5342185 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 184, 35

Conread position: 2-217
Cow position: chr9:5110731-5110940 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 206, 29

Conread position: 2-222
Cow position: chr9:33541927-33542141 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 150
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 125, 42

Conread position: 2-232
Cow position: chr9:37199002-37199218 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 2-258
Cow position: chr9:25583703-25583951 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 169
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 2-272
Cow position: chr9:25964965-25964696 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 189, 75

Conread position: 2-273
Cow position: chr9:41282887-41283149 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 28, 0

Conread position: 2-274
Cow position: chr9:48730303-48730564 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 141, 40

Conread position: 2-279
Cow position: chr9:21030179-21030450 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 2-279
Cow position: chr9:29091645-29091936 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 198
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 105, 43

Conread position: 2-295
Cow position: chr9:27279181-27279467 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 274, 43

Conread position: 2-295
Cow position: chr9:49374061-49374347 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 192
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 279, 28

Conread position: 2-297
Cow position: chr9:30402554-30402260 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 70, 40

Conread position: 2-300
Cow position: chr9:43623140-43623419 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 201
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 279, 40

Conread position: 2-306
Cow position: chr9:20416639-20416346 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 212
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 200, 134

Conread position: 2-306
Cow position: chr9:29185265-29184964 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 42

Conread position: 2-308
Cow position: chr9:4512356-4512658 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 200
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 49

Conread position: 2-308
Cow position: chr9:6338665-6338969 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 200
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 279, 28

Conread position: 2-308
Cow position: chr9:8901354-8901053 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 207, 42

Conread position: 2-308
Cow position: chr9:9551966-9552258 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 2-308
Cow position: chr9:9724004-9723713 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 210
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 94, 43

Conread position: 2-308
Cow position: chr9:9753528-9753218 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 220
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 38, 75

Conread position: 2-308
Cow position: chr9:10010687-10010975 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 283, 42

Conread position: 2-308
Cow position: chr9:28726854-28726550 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 226
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 84, 20

Conread position: 2-308
Cow position: chr9:31346824-31347125 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 212
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 204, 39

Conread position: 2-308
Cow position: chr9:35167041-35167343 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 210
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 43, 190

Conread position: 2-308
Cow position: chr9:38792890-38793184 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 98, 40

Conread position: 2-308
Cow position: chr9:42446120-42445808 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 2-308
Cow position: chr9:43207503-43207206 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 207
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 95, 33

Conread position: 2-313
Cow position: chr9:44709705-44710001 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 211
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 281, 40

Conread position: 2-313
Cow position: chr9:55117957-55118255 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 211
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 189, 28

Conread position: 2-315
Cow position: chr9:7952772-7953078 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 294, 45

Conread position: 3-308
Cow position: chr9:15806050-15805754 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 207
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 196, 41

Conread position: 3-308
Cow position: chr9:34689729-34689432 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 218
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 108, 123

Conread position: 4-235
Cow position: chr9:44770323-44770100 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 199, 109

Conread position: 4-252
Cow position: chr9:50310886-50310659 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 4-272
Cow position: chr9:38846464-38846209 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 132, 0

Conread position: 4-298
Cow position: chr9:18253043-18252762 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 196
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 278, 75

Conread position: 4-299
Cow position: chr9:41394773-41394493 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 4-306
Cow position: chr9:12226108-12225812 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 207
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 284, 83

Conread position: 4-308
Cow position: chr9:33219080-33218781 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 216
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 41, 23

Conread position: 4-308
Cow position: chr9:33597850-33598152 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 219
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 26, 191

Conread position: 4-308
Cow position: chr9:34286675-34286971 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 20

Conread position: 4-308
Cow position: chr9:52130889-52131192 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 205
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 209, 40

Conread position: 4-308
Cow position: chr9:56772938-56773250 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 228
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 23, 129

Conread position: 5-306
Cow position: chr9:6934202-6933905 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 212
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 41, 59

Conread position: 5-308
Cow position: chr9:26477090-26477387 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 214, 39

Conread position: 5-313
Cow position: chr9:17677235-17676945 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 209
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 221, 27

Conread position: 8-272
Cow position: chr9:51566617-51566360 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 183
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 8-283
Cow position: chr9:32670069-32669802 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 37, 0

Conread position: 8-293
Cow position: chr9:33114220-33114501 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 39, 53

Conread position: 8-306
Cow position: chr9:51204602-51204889 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 217
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 43, 55

Conread position: 8-307
Cow position: chr9:28392152-28391865 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 196
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 268, 146

Conread position: 8-313
Cow position: chr9:61738802-61739094 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 196, 33

Conread position: 9-251
Cow position: chr9:13994045-13994285 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 171, 44

Conread position: 11-308
Cow position: chr9:9406180-9405880 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 211
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 12, 232

Conread position: 12-312
Cow position: chr9:16811772-16811485 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 220, 24

Conread position: 16-261
Cow position: chr9:53751082-53750831 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 35, 182

Conread position: 16-308
Cow position: chr9:3782252-3782531 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 264, 42

Conread position: 16-308
Cow position: chr9:46316901-46316615 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 90

Conread position: 19-251
Cow position: chr9:23788326-23788551 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 19-269
Cow position: chr9:17411310-17411060 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 169
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 34, 178

Conread position: 19-304
Cow position: chr9:19067667-19067944 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 40, 69

Conread position: 22-308
Cow position: chr9:767262-766982 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 127, 56

Conread position: 23-305
Cow position: chr9:42037543-42037820 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 184
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 50, 11

Conread position: 24-308
Cow position: chr9:30138009-30138299 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 64

Conread position: 24-308
Cow position: chr9:62668136-62668423 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 53

Conread position: 25-182
Cow position: chr9:55354504-55354658 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 27-308
Cow position: chr9:4268091-4267813 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 182

Conread position: 27-308
Cow position: chr9:9461761-9461484 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 115, 32

Conread position: 28-181
Cow position: chr9:6293490-6293641 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 28-254
Cow position: chr9:38941540-38941315 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 26, 162

Conread position: 28-273
Cow position: chr9:28686283-28686527 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 167
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 184, 24

Conread position: 28-283
Cow position: chr9:59386877-59386630 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 23, 169

Conread position: 28-304
Cow position: chr9:50081146-50080879 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 252, 21

Conread position: 28-306
Cow position: chr9:4341263-4341001 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 28-306
Cow position: chr9:31814490-31814206 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 101, 21

Conread position: 28-308
Cow position: chr9:1520843-1520563 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 106, 24

Conread position: 28-308
Cow position: chr9:1938016-1938300 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 30, 216

Conread position: 28-308
Cow position: chr9:1972844-1973113 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 255, 24

Conread position: 28-310
Cow position: chr9:33940500-33940780 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 191
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 254, 21

Conread position: 29-152
Cow position: chr9:32052173-32052293 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 29-231
Cow position: chr9:33823012-33823214 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 160, 188

Conread position: 29-258
Cow position: chr9:33584788-33584562 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 174, 23

Conread position: 29-296
Cow position: chr9:51620339-51620596 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 101, 0

Conread position: 29-305
Cow position: chr9:28773036-28773289 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 29-308
Cow position: chr9:17741045-17740777 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 20, 0

Conread position: 30-255
Cow position: chr9:53109146-53109370 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 103, 0

Conread position: 31-309
Cow position: chr9:64155952-64155688 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 16, 0

Conread position: 32-273
Cow position: chr9:44396558-44396795 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 49

Conread position: 32-306
Cow position: chr9:44832153-44831886 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 33-283
Cow position: chr9:14796869-14796633 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 200, 16

Conread position: 33-308
Cow position: chr9:18380764-18381030 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 25

Conread position: 34-225
Cow position: chr9:34024598-34024789 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 34-300
Cow position: chr9:20322192-20321942 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 246, 29

Conread position: 34-306
Cow position: chr9:11123581-11123316 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 18, 0

Conread position: 34-306
Cow position: chr9:55256650-55256382 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 147, 15

Conread position: 34-307
Cow position: chr9:55075227-55074960 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 246, 26

Conread position: 34-308
Cow position: chr9:9596051-9595784 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 91, 18

Conread position: 34-308
Cow position: chr9:31079177-31078914 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 35-254
Cow position: chr9:54493038-54493254 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 164, 14

Conread position: 36-274
Cow position: chr9:6189465-6189235 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 119

Conread position: 36-275
Cow position: chr9:36628023-36628241 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 36-295
Cow position: chr9:9516850-9516611 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 129, 27

Conread position: 36-304
Cow position: chr9:34958153-34957888 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 21

Conread position: 36-306
Cow position: chr9:5263401-5263669 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 64

Conread position: 36-306
Cow position: chr9:20847838-20848100 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 36-308
Cow position: chr9:20681503-20681232 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 177
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 157, 24

Conread position: 36-308
Cow position: chr9:48627928-48628198 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 176

Conread position: 37-205
Cow position: chr9:52828561-52828727 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 33, 15

Conread position: 38-308
Cow position: chr9:7634177-7634444 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 38-308
Cow position: chr9:8998251-8998527 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 41, 32

Conread position: 38-308
Cow position: chr9:19555278-19555545 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 9, 78

Conread position: 38-308
Cow position: chr9:28354419-28354689 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 14, 201

Conread position: 38-311
Cow position: chr9:3738322-3738048 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 20, 179

Conread position: 39-274
Cow position: chr9:22443723-22443491 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 158, 0

Conread position: 39-306
Cow position: chr9:24872743-24873000 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 161, 17

Conread position: 40-308
Cow position: chr9:64091587-64091855 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 155, 12

Conread position: 42-241
Cow position: chr9:19758627-19758812 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 42-296
Cow position: chr9:53762604-53762856 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 102, 7

Conread position: 42-304
Cow position: chr9:32371843-32371594 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 42-308
Cow position: chr9:9403270-9403005 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 68, 7

Conread position: 42-308
Cow position: chr9:13670539-13670803 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 16, 113

Conread position: 42-308
Cow position: chr9:21888078-21888340 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 234, 17

Conread position: 42-308
Cow position: chr9:30652801-30652535 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 17, 22

Conread position: 42-308
Cow position: chr9:34902194-34901945 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 170, 83

Conread position: 42-308
Cow position: chr9:56032410-56032158 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 19, 152

Conread position: 43-266
Cow position: chr9:20466053-20465830 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 16, 68

Conread position: 43-298
Cow position: chr9:5077798-5077560 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 47

Conread position: 43-305
Cow position: chr9:12280881-12281137 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 163, 37

Conread position: 43-308
Cow position: chr9:31638746-31638470 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 48, 9

Conread position: 44-285
Cow position: chr9:6839902-6840149 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 154, 0

Conread position: 44-308
Cow position: chr9:30123837-30124091 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 197
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 14, 87

Conread position: 44-308
Cow position: chr9:34468670-34468414 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 32, 147

Conread position: 45-155
Cow position: chr9:32794033-32794141 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 45-306
Cow position: chr9:25921733-25921996 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 18

Conread position: 46-258
Cow position: chr9:9311771-9311980 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 46-306
Cow position: chr9:63745728-63745982 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 234, 28

Conread position: 48-297
Cow position: chr9:39211520-39211767 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 164
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 12

Conread position: 48-306
Cow position: chr9:22696138-22696392 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 48, 15

Conread position: 48-308
Cow position: chr9:40215161-40215414 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 232, 15

Conread position: 48-308
Cow position: chr9:50075977-50076229 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 228, 87

Conread position: 49-194
Cow position: chr9:44584507-44584653 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 139, 0

Conread position: 49-308
Cow position: chr9:4861297-4861559 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 49-308
Cow position: chr9:32115684-32115439 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 26, 10

Conread position: 49-308
Cow position: chr9:45756277-45756528 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 21, 30

Conread position: 50-274
Cow position: chr9:26310422-26310639 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 22, 0

Conread position: 50-283
Cow position: chr9:62724446-62724682 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 21, 90

Conread position: 52-199
Cow position: chr9:23970980-23970832 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 52-199
Cow position: chr9:39758435-39758582 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 52-217
Cow position: chr9:23797153-23797318 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 52-229
Cow position: chr9:8629000-8628824 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 52-237
Cow position: chr9:54615383-54615200 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 153, 69

Conread position: 52-254
Cow position: chr9:41785129-41785337 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 131, 26

Conread position: 52-256
Cow position: chr9:3343666-3343861 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 134, 0

Conread position: 52-267
Cow position: chr9:4630021-4630234 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 192, 81

Conread position: 52-273
Cow position: chr9:34697382-34697170 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 52-279
Cow position: chr9:39681256-39681481 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 149, 0

Conread position: 52-283
Cow position: chr9:4263172-4262947 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 143, 37

Conread position: 52-283
Cow position: chr9:17310643-17310417 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 7, 0

Conread position: 52-283
Cow position: chr9:35105873-35105645 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 18, 27

Conread position: 52-289
Cow position: chr9:22318269-22318498 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 87, 26

Conread position: 52-292
Cow position: chr9:6596313-6596079 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 184
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 232, 53

Conread position: 52-294
Cow position: chr9:19713997-19714232 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 229, 144

Conread position: 52-296
Cow position: chr9:3378671-3378903 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 73, 0

Conread position: 52-296
Cow position: chr9:59013422-59013175 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 143, 78

Conread position: 52-297
Cow position: chr9:54528431-54528673 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 228, 84

Conread position: 52-298
Cow position: chr9:5219255-5219008 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 89, 151

Conread position: 52-299
Cow position: chr9:62656720-62656958 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 67, 139

Conread position: 52-304
Cow position: chr9:8723711-8723960 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 146, 89

Conread position: 52-305
Cow position: chr9:43443721-43443964 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 44, 79

Conread position: 52-306
Cow position: chr9:5209500-5209749 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 52-306
Cow position: chr9:5763713-5763465 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 52-306
Cow position: chr9:11319717-11319465 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 166, 0

Conread position: 52-306
Cow position: chr9:17872193-17871935 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 138, 0

Conread position: 52-306
Cow position: chr9:51720980-51720733 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 228, 100

Conread position: 52-306
Cow position: chr9:61997686-61997430 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 78, 46

Conread position: 52-306
Cow position: chr9:64559965-64559715 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 224, 83

Conread position: 52-307
Cow position: chr9:34309946-34310200 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 21, 27

Conread position: 52-308
Cow position: chr9:5245770-5246026 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 102, 145

Conread position: 52-308
Cow position: chr9:6192542-6192292 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 70, 11

Conread position: 52-308
Cow position: chr9:8288535-8288788 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 171
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 150, 59

Conread position: 52-308
Cow position: chr9:8337944-8338197 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 171
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 151, 138

Conread position: 52-308
Cow position: chr9:8562739-8563008 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 78

Conread position: 52-308
Cow position: chr9:9654390-9654141 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 78, 0

Conread position: 52-308
Cow position: chr9:17518572-17518318 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 233, 138

Conread position: 52-308
Cow position: chr9:33119971-33119715 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 52-308
Cow position: chr9:38961511-38961263 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 128, 20

Conread position: 52-308
Cow position: chr9:55084384-55084126 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 131, 56

Conread position: 52-308
Cow position: chr9:55321554-55321808 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 151, 200

Conread position: 52-308
Cow position: chr9:61302917-61303174 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 160

Conread position: 52-310
Cow position: chr9:55287972-55287725 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 79, 0

Conread position: 52-313
Cow position: chr9:18217182-18216928 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 145, 0

Conread position: 52-313
Cow position: chr9:44467422-44467177 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 64

Conread position: 52-316
Cow position: chr9:28983100-28983358 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 176
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 53-257
Cow position: chr9:23042696-23042896 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 140
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 142, 79

Conread position: 53-301
Cow position: chr9:49293225-49292982 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 53-308
Cow position: chr9:26403703-26403956 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 157, 139

Conread position: 54-272
Cow position: chr9:55532730-55532949 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 12, 37

Conread position: 54-297
Cow position: chr9:36843712-36843947 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 87, 140

Conread position: 54-308
Cow position: chr9:20090965-20091212 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 153

Conread position: 54-308
Cow position: chr9:25556891-25557136 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 145, 177

Conread position: 54-311
Cow position: chr9:58979317-58979571 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 86

Conread position: 54-313
Cow position: chr9:5509642-5509897 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 26

Conread position: 54-313
Cow position: chr9:41679664-41679921 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 11, 140

Conread position: 55-311
Cow position: chr9:49709767-49710012 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 231, 75

Conread position: 57-227
Cow position: chr9:13460496-13460329 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 123, 15

Conread position: 57-231
Cow position: chr9:9625088-9624915 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 142, 39

Conread position: 57-271
Cow position: chr9:8636589-8636803 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 179, 153

Conread position: 57-305
Cow position: chr9:57897188-57896952 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 133, 0

Conread position: 57-306
Cow position: chr9:20579672-20579437 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 143, 80

Conread position: 57-306
Cow position: chr9:60027119-60027366 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 94, 216

Conread position: 57-307
Cow position: chr9:11299758-11299521 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 57-308
Cow position: chr9:5500775-5501028 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 60, 91

Conread position: 57-308
Cow position: chr9:45141678-45141434 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 145, 0

Conread position: 57-308
Cow position: chr9:56453261-56453499 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 15, 0

Conread position: 58-225
Cow position: chr9:24652327-24652499 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 131, 0

Conread position: 58-294
Cow position: chr9:62357605-62357372 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 112, 72

Conread position: 58-300
Cow position: chr9:1949841-1950080 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 96, 14

Conread position: 58-308
Cow position: chr9:44915173-44914917 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 128, 5

Conread position: 59-188
Cow position: chr9:7806037-7805908 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 59-252
Cow position: chr9:64064439-64064246 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 128, 181

Conread position: 59-274
Cow position: chr9:1867375-1867586 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 112, 0

Conread position: 59-308
Cow position: chr9:5319546-5319800 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 129, 56

Conread position: 59-308
Cow position: chr9:6879703-6879937 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 139, 77

Conread position: 59-308
Cow position: chr9:11168654-11168901 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 141

Conread position: 59-308
Cow position: chr9:30477850-30477610 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 199, 19

Conread position: 59-308
Cow position: chr9:50543503-50543253 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 52, 13

Conread position: 59-308
Cow position: chr9:50607021-50606778 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 63, 0

Conread position: 59-308
Cow position: chr9:52578613-52578366 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 124, 25

Conread position: 59-311
Cow position: chr9:32732755-32732511 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 220, 73

Conread position: 60-274
Cow position: chr9:40005399-40005612 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 13, 19

Conread position: 60-287
Cow position: chr9:52839955-52839737 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 60-297
Cow position: chr9:58670668-58670887 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 60-308
Cow position: chr9:19493541-19493292 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 0

Conread position: 60-308
Cow position: chr9:43870900-43871150 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 144, 0

Conread position: 61-304
Cow position: chr9:17799555-17799796 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 53, 12

Conread position: 61-308
Cow position: chr9:64105825-64106078 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 67, 74

Conread position: 61-311
Cow position: chr9:28947788-28948026 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 62-284
Cow position: chr9:29684071-29684294 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 120, 92

Conread position: 62-289
Cow position: chr9:43936873-43937091 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 63-247
Cow position: chr9:28754745-28754929 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 63-278
Cow position: chr9:52513520-52513312 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 142, 127

Conread position: 63-283
Cow position: chr9:3774094-3774307 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 213, 15

Conread position: 63-306
Cow position: chr9:63896469-63896702 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 132, 66

Conread position: 63-307
Cow position: chr9:29006485-29006731 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 127, 239

Conread position: 63-308
Cow position: chr9:3070481-3070247 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 108, 19

Conread position: 64-254
Cow position: chr9:21080492-21080679 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 44, 0

Conread position: 64-283
Cow position: chr9:34283882-34284093 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 115, 129

Conread position: 65-235
Cow position: chr9:13761029-13761200 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 126, 0

Conread position: 65-277
Cow position: chr9:32815584-32815781 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 66-308
Cow position: chr9:44921469-44921220 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 44, 0

Conread position: 68-279
Cow position: chr9:44834029-44833825 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 68-313
Cow position: chr9:10127733-10127496 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 164
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 192, 32

Conread position: 69-274
Cow position: chr9:41486308-41486104 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 25, 0

Conread position: 72-279
Cow position: chr9:7409700-7409919 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 74, 0

Conread position: 72-308
Cow position: chr9:5227235-5226997 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 135, 74

Conread position: 75-313
Cow position: chr9:47500272-47500031 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 206, 0

Conread position: 77-274
Cow position: chr9:43875777-43875577 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 77-308
Cow position: chr9:62442232-62442461 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 152
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 207, 37

Conread position: 78-273
Cow position: chr9:53326808-53326615 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 124, 83

Conread position: 78-308
Cow position: chr9:4646382-4646156 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 170, 112

Conread position: 78-308
Cow position: chr9:17928700-17928930 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 78-315
Cow position: chr9:24997574-24997343 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 0

Conread position: 79-283
Cow position: chr9:6089033-6089237 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 112, 26

Conread position: 82-278
Cow position: chr9:33043593-33043390 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 109, 184

Conread position: 83-296
Cow position: chr9:5836097-5836318 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 118

Conread position: 83-307
Cow position: chr9:38615014-38614790 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 198, 44

Conread position: 84-300
Cow position: chr9:22114686-22114472 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 111, 63

Conread position: 86-274
Cow position: chr9:11304124-11303945 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 86-308
Cow position: chr9:9823555-9823335 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 86-308
Cow position: chr9:11313559-11313339 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 119, 104

Conread position: 86-308
Cow position: chr9:47906331-47906109 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 32, 153

Conread position: 89-270
Cow position: chr9:5900009-5899829 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 54, 84

Conread position: 89-274
Cow position: chr9:11969140-11969324 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 112, 0

Conread position: 89-279
Cow position: chr9:1756191-1756003 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 80, 65

Conread position: 89-279
Cow position: chr9:47591027-47590843 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 141, 0

Conread position: 89-283
Cow position: chr9:3186080-3186273 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 111, 0

Conread position: 89-308
Cow position: chr9:20318618-20318407 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 191, 103

Conread position: 91-298
Cow position: chr9:22152129-22151922 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 109, 58

Conread position: 91-298
Cow position: chr9:53211535-53211333 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 189, 99

Conread position: 91-307
Cow position: chr9:35904789-35904576 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 101, 0

Conread position: 91-313
Cow position: chr9:27029749-27029528 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 192, 99

Conread position: 94-245
Cow position: chr9:40776757-40776905 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 94-275
Cow position: chr9:31359563-31359738 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 44, 59

Conread position: 94-308
Cow position: chr9:41513590-41513795 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 186, 27

Conread position: 94-308
Cow position: chr9:49764620-49764826 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 95-274
Cow position: chr9:34410436-34410259 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 95-307
Cow position: chr9:50202533-50202739 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 99, 0

Conread position: 95-308
Cow position: chr9:1370888-1371106 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 121, 97

Conread position: 95-308
Cow position: chr9:8534730-8534514 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 181, 101

Conread position: 95-308
Cow position: chr9:52407124-52407340 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 185, 0

Conread position: 95-311
Cow position: chr9:5456215-5456000 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 188, 97

Conread position: 98-252
Cow position: chr9:50125631-50125479 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 99-308
Cow position: chr9:3931925-3932134 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 166, 18

Conread position: 100-256
Cow position: chr9:59020266-59020112 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 100-274
Cow position: chr9:43013687-43013860 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 98, 26

Conread position: 100-279
Cow position: chr9:22638067-22638242 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 100-279
Cow position: chr9:41518661-41518479 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 114

Conread position: 100-280
Cow position: chr9:33411606-33411435 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 100-281
Cow position: chr9:10905852-10905672 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 112, 160

Conread position: 100-300
Cow position: chr9:647742-647938 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 181, 108

Conread position: 100-300
Cow position: chr9:16121133-16121331 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 134, 87

Conread position: 100-302
Cow position: chr9:35375391-35375592 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 180, 15

Conread position: 100-308
Cow position: chr9:54924583-54924793 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 142
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 100-308
Cow position: chr9:57274185-57274403 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 136

Conread position: 100-313
Cow position: chr9:823925-824136 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 182, 124

Conread position: 100-313
Cow position: chr9:26440847-26440624 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 100-313
Cow position: chr9:47472651-47472869 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 91, 33

Conread position: 101-308
Cow position: chr9:62134658-62134449 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 32

Conread position: 102-306
Cow position: chr9:5433599-5433807 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 100, 0

Conread position: 102-313
Cow position: chr9:35849871-35850075 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 105-297
Cow position: chr9:5441959-5442151 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 105-308
Cow position: chr9:38343860-38344061 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 91, 25

Conread position: 106-308
Cow position: chr9:36827106-36827301 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 107-308
Cow position: chr9:6225482-6225281 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 176, 14

Conread position: 107-308
Cow position: chr9:9416423-9416232 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 173, 26

Conread position: 108-308
Cow position: chr9:34742751-34742558 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 108-308
Cow position: chr9:35533980-35533779 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 172, 84

Conread position: 109-308
Cow position: chr9:42497795-42498000 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 63

Conread position: 111-308
Cow position: chr9:1952294-1952098 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 91, 0

Conread position: 111-308
Cow position: chr9:3387665-3387862 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 169, 81

Conread position: 114-274
Cow position: chr9:41853411-41853576 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 114-308
Cow position: chr9:22360989-22361182 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 95, 78

Conread position: 118-308
Cow position: chr9:26057454-26057269 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 162, 23

Conread position: 120-308
Cow position: chr9:33038476-33038291 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 32

Conread position: 126-313
Cow position: chr9:40543334-40543146 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 155, 84

Conread position: 133-283
Cow position: chr9:11377946-11377796 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 143, 59

Conread position: 135-306
Cow position: chr9:30195214-30195378 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 135-308
Cow position: chr9:4128781-4128613 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 135-308
Cow position: chr9:10092393-10092215 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 6

Conread position: 144-306
Cow position: chr9:29035027-29034863 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 157

Conread position: 144-308
Cow position: chr9:1712467-1712306 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 148-297
Cow position: chr9:9086204-9086357 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 148-308
Cow position: chr9:4324144-4323987 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 148-311
Cow position: chr9:31270793-31270953 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 149-308
Cow position: chr9:22228067-22227912 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 44

Conread position: 150-297
Cow position: chr9:42509131-42509274 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 155-308
Cow position: chr9:18002934-18002778 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 128, 0

Conread position: 155-308
Cow position: chr9:26390787-26390939 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 9, 38

Conread position: 155-308
Cow position: chr9:50667441-50667595 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 76, 37

Conread position: 159-308
Cow position: chr9:34666444-34666589 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 164-308
Cow position: chr9:20811036-20810894 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 46

Conread position: 164-308
Cow position: chr9:41652815-41652956 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 166-308
Cow position: chr9:31292720-31292859 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 169-308
Cow position: chr9:4928659-4928798 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 177-306
Cow position: chr9:18073073-18072945 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 192-308
Cow position: chr9:8546375-8546489 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 198-308
Cow position: chr9:53608334-53608224 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.