Cow genome map

Conread name: rcte04_l7.y1

Conread position: 1-300
Cow position:
Alignm length: 305
Alignm identity: 209
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 87, 112

Conread position: 1-331
Cow position:
Alignm length: 349
Alignm identity: 244
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 64, 23

Conread position: 1-373
Cow position:
Alignm length: 380
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 19

Conread position: 1-400
Cow position:
Alignm length: 408
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 39

Conread position: 1-400
Cow position:
Alignm length: 400
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 1-400
Cow position:
Alignm length: 401
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 19

Conread position: 1-400
Cow position:
Alignm length: 420
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 71

Conread position: 1-400
Cow position:
Alignm length: 405
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 20

Conread position: 1-400
Cow position:
Alignm length: 402
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 34

Conread position: 1-400
Cow position:
Alignm length: 405
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 59

Conread position: 3-400
Cow position:
Alignm length: 403
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 57

Conread position: 6-357
Cow position:
Alignm length: 352
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 8-396
Cow position:
Alignm length: 408
Alignm identity: 274
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 13, 41

Conread position: 8-398
Cow position:
Alignm length: 395
Alignm identity: 258
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 201, 12

Conread position: 9-244
Cow position:
Alignm length: 240
Alignm identity: 173
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 134, 57

Conread position: 9-390
Cow position:
Alignm length: 386
Alignm identity: 248
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 63

Conread position: 10-249
Cow position:
Alignm length: 247
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 47

Conread position: 10-385
Cow position:
Alignm length: 380
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 72

Conread position: 11-337
Cow position:
Alignm length: 336
Alignm identity: 228
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 125, 59

Conread position: 11-398
Cow position:
Alignm length: 394
Alignm identity: 276
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 29, 56

Conread position: 11-400
Cow position:
Alignm length: 395
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 56

Conread position: 11-400
Cow position:
Alignm length: 399
Alignm identity: 280
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 12, 59

Conread position: 12-251
Cow position:
Alignm length: 246
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 124, 74

Conread position: 12-398
Cow position:
Alignm length: 390
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 8

Conread position: 13-400
Cow position:
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 53

Conread position: 14-400
Cow position:
Alignm length: 391
Alignm identity: 272
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 48, 57

Conread position: 15-247
Cow position:
Alignm length: 240
Alignm identity: 173
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 119, 12

Conread position: 15-400
Cow position:
Alignm length: 388
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 12

Conread position: 15-400
Cow position:
Alignm length: 391
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 48

Conread position: 27-299
Cow position:
Alignm length: 279
Alignm identity: 195
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 190

Conread position: 29-288
Cow position:
Alignm length: 266
Alignm identity: 191
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 171, 37

Conread position: 38-402
Cow position:
Alignm length: 372
Alignm identity: 261
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 214, 28

Conread position: 67-400
Cow position:
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 232

Conread position: 68-292
Cow position:
Alignm length: 234
Alignm identity: 173
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 5, 24

Conread position: 68-402
Cow position:
Alignm length: 341
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 107

Conread position: 69-400
Cow position:
Alignm length: 342
Alignm identity: 232
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 138, 44

Conread position: 69-400
Cow position:
Alignm length: 335
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 45

Conread position: 70-340
Cow position:
Alignm length: 278
Alignm identity: 189
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 66, 43

Conread position: 71-393
Cow position:
Alignm length: 346
Alignm identity: 246
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 71

Conread position: 71-402
Cow position:
Alignm length: 337
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 91

Conread position: 75-398
Cow position:
Alignm length: 335
Alignm identity: 232
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 13, 159

Conread position: 76-400
Cow position:
Alignm length: 328
Alignm identity: 228
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 60, 143

Conread position: 76-400
Cow position:
Alignm length: 331
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 17

Conread position: 84-254
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 120

Conread position: 84-392
Cow position:
Alignm length: 322
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 186

Conread position: 85-398
Cow position:
Alignm length: 325
Alignm identity: 212
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 188

Conread position: 86-400
Cow position:
Alignm length: 320
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 156

Conread position: 90-322
Cow position:
Alignm length: 237
Alignm identity: 173
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 51, 69

Conread position: 90-400
Cow position:
Alignm length: 326
Alignm identity: 229
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 15, 138

Conread position: 90-400
Cow position:
Alignm length: 313
Alignm identity: 222
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 47, 20

Conread position: 95-383
Cow position:
Alignm length: 293
Alignm identity: 218
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 60, 17

Conread position: 96-361
Cow position:
Alignm length: 268
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 101-287
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 35, 145

Conread position: 101-299
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 101

Conread position: 106-399
Cow position:
Alignm length: 298
Alignm identity: 215
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 30, 82

Conread position: 114-388
Cow position:
Alignm length: 286
Alignm identity: 213
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 22, 60

Conread position: 114-400
Cow position:
Alignm length: 292
Alignm identity: 199
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 33, 111

Conread position: 124-402
Cow position:
Alignm length: 288
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 126-393
Cow position:
Alignm length: 271
Alignm identity: 205
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 10, 33

Conread position: 131-373
Cow position:
Alignm length: 251
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 134-400
Cow position:
Alignm length: 269
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 73

Conread position: 141-397
Cow position:
Alignm length: 258
Alignm identity: 196
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 120, 64

Conread position: 141-398
Cow position:
Alignm length: 258
Alignm identity: 197
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 28, 0

Conread position: 142-400
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 81

Conread position: 145-373
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 60, 105

Conread position: 146-304
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 39

Conread position: 146-379
Cow position:
Alignm length: 237
Alignm identity: 182
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 59, 40

Conread position: 148-398
Cow position:
Alignm length: 256
Alignm identity: 191
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 13, 74

Conread position: 150-400
Cow position:
Alignm length: 251
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 157-401
Cow position:
Alignm length: 248
Alignm identity: 191
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 49, 89

Conread position: 172-400
Cow position:
Alignm length: 232
Alignm identity: 178
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 74

Conread position: 173-353
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 33, 73

Conread position: 173-400
Cow position:
Alignm length: 239
Alignm identity: 183
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 30, 165

Conread position: 174-398
Cow position:
Alignm length: 238
Alignm identity: 170
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 17, 46

Conread position: 182-400
Cow position:
Alignm length: 229
Alignm identity: 176
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 58

Conread position: 188-398
Cow position:
Alignm length: 215
Alignm identity: 164
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 19, 70

Conread position: 189-356
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 159

Conread position: 190-398
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 15, 57

Conread position: 192-400
Cow position:
Alignm length: 211
Alignm identity: 161
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 46

Conread position: 193-400
Cow position:
Alignm length: 209
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 51

Conread position: 194-378
Cow position:
Alignm length: 185
Alignm identity: 150
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 43, 0

Conread position: 199-380
Cow position:
Alignm length: 183
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 108, 21

Conread position: 199-398
Cow position:
Alignm length: 200
Alignm identity: 148
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 199-400
Cow position:
Alignm length: 204
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 35

Conread position: 202-338
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 202-400
Cow position:
Alignm length: 200
Alignm identity: 154
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 58, 160

Conread position: 207-393
Cow position:
Alignm length: 187
Alignm identity: 153
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 30, 0

Conread position: 207-398
Cow position:
Alignm length: 192
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 0

Conread position: 209-400
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 102, 31

Conread position: 225-349
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 230-400
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 32

Conread position: 234-400
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 40, 9

Conread position: 235-398
Cow position:
Alignm length: 165
Alignm identity: 133
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 51, 23

Conread position: 238-397
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 240-359
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 70

Conread position: 242-397
Cow position:
Alignm length: 156
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 243-397
Cow position:
Alignm length: 156
Alignm identity: 126
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 37, 20

Conread position: 243-400
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 243-401
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 248-400
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 259-400
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 261-371
Cow position:
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 264-400
Cow position:
Alignm length: 137
Alignm identity: 112
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 264-400
Cow position:
Alignm length: 137
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 129, 0

Conread position: 264-401
Cow position:
Alignm length: 138
Alignm identity: 111
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 266-397
Cow position:
Alignm length: 132
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 266-400
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 268-398
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 270-400
Cow position:
Alignm length: 131
Alignm identity: 109
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 272-400
Cow position:
Alignm length: 129
Alignm identity: 111
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 276-398
Cow position:
Alignm length: 129
Alignm identity: 107
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 276-400
Cow position:
Alignm length: 125
Alignm identity: 107
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 76, 0

Conread position: 278-402
Cow position:
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 103, 0

Conread position: 286-400
Cow position:
Alignm length: 115
Alignm identity: 99
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 292-400
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 300-400
Cow position:
Alignm length: 102
Alignm identity: 89
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 32, 0

Show alignments to all cow chromosomes.