Cow genome map


           Conread name:
           rcte04_l7.y1
        

               Conread position:
               1-197
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               142, 20
               

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               217
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               48, 57
               

               Conread position:
               1-338
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               243
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               54, 19
               

               Conread position:
               1-398
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 60
               

               Conread position:
               1-398
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               284
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 67
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 19
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 19
               

               Conread position:
               1-402
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 35
               

               Conread position:
               7-400
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               279
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               196, 29
               

               Conread position:
               7-400
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 55
               

               Conread position:
               10-398
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 26
               

               Conread position:
               10-400
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 8
               

               Conread position:
               11-240
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               156, 52
               

               Conread position:
               11-305
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               240, 48
               

               Conread position:
               11-400
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 23
               

               Conread position:
               11-400
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 51
               

               Conread position:
               11-401
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 76
               

               Conread position:
               12-255
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               10, 67
               

               Conread position:
               15-400
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 19
               

               Conread position:
               20-244
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 37
               

               Conread position:
               24-216
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               117, 46
               

               Conread position:
               25-353
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               111, 43
               

               Conread position:
               25-398
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 43
               

               Conread position:
               30-400
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 185
               

               Conread position:
               31-400
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 10
               

               Conread position:
               63-235
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               141, 56
               

               Conread position:
               71-400
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               20, 181
               

               Conread position:
               72-400
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               8, 45
               

               Conread position:
               80-402
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 57
               

               Conread position:
               83-398
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               53, 30
               

               Conread position:
               85-402
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               122, 19
               

               Conread position:
               96-393
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               49, 129
               

               Conread position:
               101-397
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 31
               

               Conread position:
               113-392
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               23, 104
               

               Conread position:
               114-393
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               22, 58
               

               Conread position:
               118-398
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               126-401
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               77, 28
               

               Conread position:
               129-399
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 17
               

               Conread position:
               133-340
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               163
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               76, 125
               

               Conread position:
               133-397
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 24
               

               Conread position:
               139-393
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               193
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               67, 19
               

               Conread position:
               141-342
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               64, 39
               

               Conread position:
               142-400
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 104
               

               Conread position:
               146-400
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 77
               

               Conread position:
               149-398
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 101
               

               Conread position:
               151-342
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               154-401
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               35, 40
               

               Conread position:
               160-398
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 18
               

               Conread position:
               165-398
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               91, 18
               

               Conread position:
               167-388
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               14, 58
               

               Conread position:
               169-383
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               148, 78
               

               Conread position:
               174-370
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               162
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               31, 47
               

               Conread position:
               175-397
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               176-353
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               29, 70
               

               Conread position:
               180-400
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               25, 66
               

               Conread position:
               181-334
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               28, 62
               

               Conread position:
               192-398
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               15, 66
               

               Conread position:
               201-357
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               47, 36
               

               Conread position:
               205-399
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               205-399
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               158
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               209-400
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               161
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 34
               

               Conread position:
               219-400
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               49, 24
               

               Conread position:
               221-398
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               35, 10
               

               Conread position:
               229-402
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               24, 41
               

               Conread position:
               231-400
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               89, 33
               

               Conread position:
               232-372
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               11, 98
               

               Conread position:
               232-398
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               135, 22
               

               Conread position:
               235-400
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 129
               

               Conread position:
               243-399
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               25, 11
               

               Conread position:
               248-400
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               8, 56
               

               Conread position:
               260-398
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               88, 119
               

               Conread position:
               266-399
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               266-400
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               276-400
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-397
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               277-400
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 13
               

               Conread position:
               277-402
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               279-400
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               57, 96
               

               Conread position:
               282-400
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               287-400
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.