Cow genome map

Conread name: rcte04_l7.y1

Conread position: 1-183
Cow position:
Alignm length: 186
Alignm identity: 132
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 81, 8

Conread position: 1-225
Cow position:
Alignm length: 230
Alignm identity: 158
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 33, 81

Conread position: 1-307
Cow position:
Alignm length: 312
Alignm identity: 234
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 135, 26

Conread position: 1-331
Cow position:
Alignm length: 333
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 15

Conread position: 1-345
Cow position:
Alignm length: 348
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 69

Conread position: 1-364
Cow position:
Alignm length: 376
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 72

Conread position: 1-371
Cow position:
Alignm length: 375
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 64

Conread position: 1-395
Cow position:
Alignm length: 401
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 20

Conread position: 1-397
Cow position:
Alignm length: 400
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 8

Conread position: 1-398
Cow position:
Alignm length: 406
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 61

Conread position: 1-400
Cow position:
Alignm length: 402
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 13

Conread position: 1-400
Cow position:
Alignm length: 409
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 28

Conread position: 1-400
Cow position:
Alignm length: 405
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 20

Conread position: 1-402
Cow position:
Alignm length: 408
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 88

Conread position: 3-400
Cow position:
Alignm length: 403
Alignm identity: 277
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 132, 12

Conread position: 4-386
Cow position:
Alignm length: 389
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 57

Conread position: 7-250
Cow position:
Alignm length: 250
Alignm identity: 168
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 167

Conread position: 8-350
Cow position:
Alignm length: 348
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 68

Conread position: 9-400
Cow position:
Alignm length: 400
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 54

Conread position: 9-400
Cow position:
Alignm length: 395
Alignm identity: 271
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 127, 61

Conread position: 9-401
Cow position:
Alignm length: 400
Alignm identity: 266
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 9, 60

Conread position: 10-394
Cow position:
Alignm length: 394
Alignm identity: 269
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 24, 80

Conread position: 11-392
Cow position:
Alignm length: 389
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 76

Conread position: 11-398
Cow position:
Alignm length: 393
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 47

Conread position: 11-402
Cow position:
Alignm length: 398
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 52

Conread position: 12-353
Cow position:
Alignm length: 350
Alignm identity: 247
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 18, 49

Conread position: 12-370
Cow position:
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 24

Conread position: 12-400
Cow position:
Alignm length: 396
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 50

Conread position: 12-400
Cow position:
Alignm length: 393
Alignm identity: 283
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 197, 48

Conread position: 13-400
Cow position:
Alignm length: 392
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 53

Conread position: 15-399
Cow position:
Alignm length: 389
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 51

Conread position: 15-399
Cow position:
Alignm length: 403
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 45

Conread position: 47-245
Cow position:
Alignm length: 203
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 40

Conread position: 59-398
Cow position:
Alignm length: 346
Alignm identity: 224
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 11

Conread position: 67-334
Cow position:
Alignm length: 271
Alignm identity: 198
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 140, 18

Conread position: 67-393
Cow position:
Alignm length: 331
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 20

Conread position: 67-399
Cow position:
Alignm length: 342
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 9

Conread position: 67-400
Cow position:
Alignm length: 353
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 172

Conread position: 69-392
Cow position:
Alignm length: 330
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 166

Conread position: 69-400
Cow position:
Alignm length: 334
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 131

Conread position: 70-334
Cow position:
Alignm length: 273
Alignm identity: 200
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 11, 52

Conread position: 71-394
Cow position:
Alignm length: 329
Alignm identity: 218
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 10, 19

Conread position: 72-397
Cow position:
Alignm length: 335
Alignm identity: 215
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 7, 102

Conread position: 75-398
Cow position:
Alignm length: 324
Alignm identity: 227
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 12, 0

Conread position: 76-401
Cow position:
Alignm length: 331
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 78

Conread position: 79-329
Cow position:
Alignm length: 254
Alignm identity: 175
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 125, 53

Conread position: 90-250
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 158

Conread position: 90-400
Cow position:
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 170

Conread position: 92-368
Cow position:
Alignm length: 282
Alignm identity: 204
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 19, 159

Conread position: 94-400
Cow position:
Alignm length: 309
Alignm identity: 193
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 96, 38

Conread position: 95-402
Cow position:
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 103

Conread position: 103-400
Cow position:
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 10

Conread position: 106-377
Cow position:
Alignm length: 278
Alignm identity: 189
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 25, 142

Conread position: 113-370
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 24, 69

Conread position: 113-380
Cow position:
Alignm length: 273
Alignm identity: 201
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 28, 135

Conread position: 118-400
Cow position:
Alignm length: 290
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 20

Conread position: 124-360
Cow position:
Alignm length: 247
Alignm identity: 170
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 36

Conread position: 133-382
Cow position:
Alignm length: 251
Alignm identity: 188
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 10, 77

Conread position: 133-382
Cow position:
Alignm length: 251
Alignm identity: 188
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 10, 77

Conread position: 133-400
Cow position:
Alignm length: 273
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 106

Conread position: 138-398
Cow position:
Alignm length: 261
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 142-400
Cow position:
Alignm length: 259
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 146-402
Cow position:
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 100

Conread position: 154-326
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 158-400
Cow position:
Alignm length: 244
Alignm identity: 170
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 28

Conread position: 172-396
Cow position:
Alignm length: 228
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 14

Conread position: 173-400
Cow position:
Alignm length: 229
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 55

Conread position: 176-400
Cow position:
Alignm length: 230
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 69

Conread position: 184-338
Cow position:
Alignm length: 159
Alignm identity: 126
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 19, 63

Conread position: 186-398
Cow position:
Alignm length: 213
Alignm identity: 157
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 6, 0

Conread position: 188-395
Cow position:
Alignm length: 211
Alignm identity: 161
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 17, 59

Conread position: 189-353
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 16, 75

Conread position: 189-357
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 67, 17

Conread position: 195-382
Cow position:
Alignm length: 191
Alignm identity: 142
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 167, 16

Conread position: 199-400
Cow position:
Alignm length: 203
Alignm identity: 159
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 61, 0

Conread position: 201-398
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 105

Conread position: 202-364
Cow position:
Alignm length: 163
Alignm identity: 127
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 202-398
Cow position:
Alignm length: 204
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 91, 41

Conread position: 202-400
Cow position:
Alignm length: 200
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 12, 21

Conread position: 212-398
Cow position:
Alignm length: 187
Alignm identity: 153
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 7, 0

Conread position: 217-400
Cow position:
Alignm length: 187
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 92

Conread position: 218-329
Cow position:
Alignm length: 112
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 220-400
Cow position:
Alignm length: 181
Alignm identity: 140
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 224-386
Cow position:
Alignm length: 164
Alignm identity: 127
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 52, 99

Conread position: 239-397
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 245-400
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 247-397
Cow position:
Alignm length: 151
Alignm identity: 118
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 248-400
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 12, 78

Conread position: 248-400
Cow position:
Alignm length: 154
Alignm identity: 124
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 59

Conread position: 253-402
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 261-400
Cow position:
Alignm length: 140
Alignm identity: 120
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 91, 0

Conread position: 264-400
Cow position:
Alignm length: 144
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 264-400
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 266-386
Cow position:
Alignm length: 121
Alignm identity: 100
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 266-400
Cow position:
Alignm length: 136
Alignm identity: 114
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 89, 0

Conread position: 267-400
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 270-384
Cow position:
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 278-400
Cow position:
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 280-402
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 281-391
Cow position:
Alignm length: 111
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 0

Show alignments to all cow chromosomes.