Cow genome map


           Conread name:
           rcte04_l7.y1
        

               Conread position:
               1-362
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 21
               

               Conread position:
               1-369
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               268
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               135, 19
               

               Conread position:
               1-397
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 19
               

               Conread position:
               1-398
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 18
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 63
               

               Conread position:
               1-402
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               284
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               71, 19
               

               Conread position:
               3-398
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               285
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               133, 17
               

               Conread position:
               3-402
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 62
               

               Conread position:
               3-402
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 17
               

               Conread position:
               4-402
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               20, 58
               

               Conread position:
               8-400
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 243
               

               Conread position:
               15-372
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 53
               

               Conread position:
               20-370
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 56
               

               Conread position:
               22-400
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 46
               

               Conread position:
               32-400
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 37
               

               Conread position:
               60-402
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               247
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               76, 95
               

               Conread position:
               69-400
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 99
               

               Conread position:
               77-400
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 146
               

               Conread position:
               99-400
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               42, 218
               

               Conread position:
               104-379
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               32, 75
               

               Conread position:
               106-400
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 26
               

               Conread position:
               116-395
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               20, 62
               

               Conread position:
               121-330
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               99, 21
               

               Conread position:
               121-399
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               15, 100
               

               Conread position:
               129-400
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 118
               

               Conread position:
               136-402
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               12, 90
               

               Conread position:
               141-398
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               253, 57
               

               Conread position:
               141-400
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               96, 49
               

               Conread position:
               147-344
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               58, 97
               

               Conread position:
               149-338
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               101, 43
               

               Conread position:
               150-400
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               161-402
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               188
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               44, 62
               

               Conread position:
               162-400
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 101
               

               Conread position:
               165-398
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               10, 63
               

               Conread position:
               167-261
               

               Cow position:
               
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               174-399
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               32, 49
               

               Conread position:
               175-400
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               30, 11
               

               Conread position:
               183-400
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               173
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               10, 25
               

               Conread position:
               186-352
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               5, 13
               

               Conread position:
               188-400
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               49, 17
               

               Conread position:
               192-400
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               13, 56
               

               Conread position:
               193-400
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               75, 44
               

               Conread position:
               197-400
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               54, 40
               

               Conread position:
               200-400
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               50, 139
               

               Conread position:
               202-400
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               59, 41
               

               Conread position:
               206-400
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               42, 14
               

               Conread position:
               210-400
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               48, 167
               

               Conread position:
               211-396
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               153
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               216-400
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               231-400
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               37, 74
               

               Conread position:
               246-400
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               273-400
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               277-398
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               40, 97
               

               Conread position:
               282-400
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 46
               
Show alignments to all cow chromosomes.