Cow genome map


           Conread name:
           rcte04_l7.y1
        

               Conread position:
               1-273
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 19
               

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               141, 19
               

               Conread position:
               1-327
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 83
               

               Conread position:
               1-328
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               135, 54
               

               Conread position:
               1-361
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 59
               

               Conread position:
               1-372
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 19
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 62
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 19
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 19
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 70
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 75
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               277
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               347, 19
               

               Conread position:
               1-402
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 62
               

               Conread position:
               2-199
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               79, 61
               

               Conread position:
               3-344
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 17
               

               Conread position:
               3-400
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 12
               

               Conread position:
               3-400
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 67
               

               Conread position:
               4-398
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               143, 41
               

               Conread position:
               6-384
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 76
               

               Conread position:
               8-398
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               276
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               128, 12
               

               Conread position:
               8-400
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 63
               

               Conread position:
               8-402
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 139
               

               Conread position:
               9-250
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               128, 67
               

               Conread position:
               9-371
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               283, 67
               

               Conread position:
               9-400
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               86, 55
               

               Conread position:
               10-384
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               261
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               30, 78
               

               Conread position:
               10-400
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               126, 59
               

               Conread position:
               11-364
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 51
               

               Conread position:
               11-397
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 65
               

               Conread position:
               11-400
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 64
               

               Conread position:
               15-330
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 46
               

               Conread position:
               15-398
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 51
               

               Conread position:
               20-395
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 42
               

               Conread position:
               25-400
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 57
               

               Conread position:
               29-305
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               102, 39
               

               Conread position:
               32-379
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               67-400
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 155
               

               Conread position:
               68-400
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               68, 17
               

               Conread position:
               69-400
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               8, 174
               

               Conread position:
               71-400
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 114
               

               Conread position:
               79-399
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 8
               

               Conread position:
               89-275
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               47, 108
               

               Conread position:
               92-371
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               204
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               43, 90
               

               Conread position:
               92-398
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 40
               

               Conread position:
               100-345
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               43, 53
               

               Conread position:
               104-400
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 137
               

               Conread position:
               105-366
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               109-400
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               27, 73
               

               Conread position:
               115-388
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 75
               

               Conread position:
               127-401
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               112, 70
               

               Conread position:
               128-400
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               77, 17
               

               Conread position:
               133-400
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 55
               

               Conread position:
               142-366
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               39, 74
               

               Conread position:
               142-389
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               142-400
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               142-400
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               202
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               63, 96
               

               Conread position:
               142-400
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 29
               

               Conread position:
               142-400
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               51, 129
               

               Conread position:
               143-389
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               146-400
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 77
               

               Conread position:
               153-341
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               48, 93
               

               Conread position:
               154-386
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               48, 24
               

               Conread position:
               157-400
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 17
               

               Conread position:
               160-377
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               92, 125
               

               Conread position:
               163-402
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               179-398
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               26, 44
               

               Conread position:
               189-400
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 69
               

               Conread position:
               200-388
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               56, 21
               

               Conread position:
               201-399
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               201-400
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               57, 40
               

               Conread position:
               204-402
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               49, 106
               

               Conread position:
               208-400
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               62, 39
               

               Conread position:
               210-390
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               62, 27
               

               Conread position:
               214-400
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               145, 43
               

               Conread position:
               220-400
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               123, 37
               

               Conread position:
               221-390
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               39, 16
               

               Conread position:
               223-402
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               227-402
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               150
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               29, 16
               

               Conread position:
               249-402
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               254-398
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               266-398
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               266-400
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               62, 117
               

               Conread position:
               266-402
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               277-398
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               282-397
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               282-400
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               288-400
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               292-400
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               294-402
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               42, 25
               
Show alignments to all cow chromosomes.