Cow genome map
Conread name: | rcte04_l7.y1 |
Conread position: | 1-273 |
Cow position: | chr13:26943007-26943279 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 19 |
Conread position: | 1-285 |
Cow position: | chr13:39487533-39487813 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 212 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 141, 19 |
Conread position: | 1-327 |
Cow position: | chr13:21878479-21878153 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 83 |
Conread position: | 1-328 |
Cow position: | chr13:34336473-34336766 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 228 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 135, 54 |
Conread position: | 1-361 |
Cow position: | chr13:17169408-17169747 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 59 |
Conread position: | 1-372 |
Cow position: | chr13:51240938-51241295 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 19 |
Conread position: | 1-400 |
Cow position: | chr13:12325318-12325680 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 62 |
Conread position: | 1-400 |
Cow position: | chr13:19115632-19116000 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 19 |
Conread position: | 1-400 |
Cow position: | chr13:24404160-24403777 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 19 |
Conread position: | 1-400 |
Cow position: | chr13:34264888-34264513 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 70 |
Conread position: | 1-400 |
Cow position: | chr13:34885175-34885576 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 75 |
Conread position: | 1-400 |
Cow position: | chr13:37497941-37498298 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 277 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 347, 19 |
Conread position: | 1-402 |
Cow position: | chr13:55406874-55407262 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 62 |
Conread position: | 2-199 |
Cow position: | chr13:18839131-18839323 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 148 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 79, 61 |
Conread position: | 3-344 |
Cow position: | chr13:46464605-46464283 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 17 |
Conread position: | 3-400 |
Cow position: | chr13:17596987-17597360 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 12 |
Conread position: | 3-400 |
Cow position: | chr13:45497469-45497856 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 67 |
Conread position: | 4-398 |
Cow position: | chr13:43848887-43848521 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 262 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 143, 41 |
Conread position: | 6-384 |
Cow position: | chr13:28605617-28605997 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 76 |
Conread position: | 8-398 |
Cow position: | chr13:43803135-43803516 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 276 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 128, 12 |
Conread position: | 8-400 |
Cow position: | chr13:33239724-33240112 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 63 |
Conread position: | 8-402 |
Cow position: | chr13:14080246-14079852 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 139 |
Conread position: | 9-250 |
Cow position: | chr13:17127542-17127306 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 166 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 128, 67 |
Conread position: | 9-371 |
Cow position: | chr13:30835945-30836291 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 243 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 283, 67 |
Conread position: | 9-400 |
Cow position: | chr13:15731353-15730976 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 273 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 86, 55 |
Conread position: | 10-384 |
Cow position: | chr13:50661948-50662328 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 261 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 30, 78 |
Conread position: | 10-400 |
Cow position: | chr13:4908332-4908693 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 269 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 126, 59 |
Conread position: | 11-364 |
Cow position: | chr13:47325676-47325339 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 51 |
Conread position: | 11-397 |
Cow position: | chr13:44144191-44143815 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 65 |
Conread position: | 11-400 |
Cow position: | chr13:19015256-19014872 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 64 |
Conread position: | 15-330 |
Cow position: | chr13:20656546-20656864 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 46 |
Conread position: | 15-398 |
Cow position: | chr13:38535173-38534808 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 51 |
Conread position: | 20-395 |
Cow position: | chr13:25955400-25955031 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 42 |
Conread position: | 25-400 |
Cow position: | chr13:43385024-43385387 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 57 |
Conread position: | 29-305 |
Cow position: | chr13:24675891-24676165 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 202 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 102, 39 |
Conread position: | 32-379 |
Cow position: | chr13:51142774-51142445 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 67-400 |
Cow position: | chr13:51435219-51434889 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 155 |
Conread position: | 68-400 |
Cow position: | chr13:27529034-27529353 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 222 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 68, 17 |
Conread position: | 69-400 |
Cow position: | chr13:26255470-26255130 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 231 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 8, 174 |
Conread position: | 71-400 |
Cow position: | chr13:11223155-11222838 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 114 |
Conread position: | 79-399 |
Cow position: | chr13:6921304-6921002 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 8 |
Conread position: | 89-275 |
Cow position: | chr13:47279996-47279805 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 144 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 47, 108 |
Conread position: | 92-371 |
Cow position: | chr13:5619395-5619111 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 204 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 43, 90 |
Conread position: | 92-398 |
Cow position: | chr13:12213767-12214074 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 40 |
Conread position: | 100-345 |
Cow position: | chr13:34931557-34931791 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 176 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 43, 53 |
Conread position: | 104-400 |
Cow position: | chr13:4796124-4796423 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 137 |
Conread position: | 105-366 |
Cow position: | chr13:12658015-12658266 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 185 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 109-400 |
Cow position: | chr13:698693-698969 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 212 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 27, 73 |
Conread position: | 115-388 |
Cow position: | chr13:10854705-10854432 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 75 |
Conread position: | 127-401 |
Cow position: | chr13:43928914-43928646 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 191 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 112, 70 |
Conread position: | 128-400 |
Cow position: | chr13:57611548-57611819 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 204 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 77, 17 |
Conread position: | 133-400 |
Cow position: | chr13:38361967-38361700 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 55 |
Conread position: | 142-366 |
Cow position: | chr13:28590502-28590717 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 161 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 39, 74 |
Conread position: | 142-389 |
Cow position: | chr13:11778208-11778430 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 179 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 101, 0 |
Conread position: | 142-400 |
Cow position: | chr13:2416386-2416641 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 0 |
Conread position: | 142-400 |
Cow position: | chr13:18597024-18596785 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 202 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 63, 96 |
Conread position: | 142-400 |
Cow position: | chr13:22193751-22194003 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 29 |
Conread position: | 142-400 |
Cow position: | chr13:59997460-59997198 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 195 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 51, 129 |
Conread position: | 143-389 |
Cow position: | chr13:26034546-26034323 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 188 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 146-400 |
Cow position: | chr13:48580644-48580396 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 77 |
Conread position: | 153-341 |
Cow position: | chr13:9103266-9103082 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 148 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 48, 93 |
Conread position: | 154-386 |
Cow position: | chr13:57246096-57246321 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 175 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 48, 24 |
Conread position: | 157-400 |
Cow position: | chr13:15489883-15490117 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 17 |
Conread position: | 160-377 |
Cow position: | chr13:2807689-2807916 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 161 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 92, 125 |
Conread position: | 163-402 |
Cow position: | chr13:62210344-62210566 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 175 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 163, 17 |
Conread position: | 179-398 |
Cow position: | chr13:18839444-18839659 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 175 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 26, 44 |
Conread position: | 189-400 |
Cow position: | chr13:14708753-14708965 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 69 |
Conread position: | 200-388 |
Cow position: | chr13:46373042-46372861 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 137 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 56, 21 |
Conread position: | 201-399 |
Cow position: | chr13:4659669-4659475 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 153 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 201-400 |
Cow position: | chr13:24197989-24197801 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 146 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 57, 40 |
Conread position: | 204-402 |
Cow position: | chr13:13987916-13987712 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 149 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 49, 106 |
Conread position: | 208-400 |
Cow position: | chr13:30951063-30950868 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 148 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 62, 39 |
Conread position: | 210-390 |
Cow position: | chr13:48080178-48080359 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 135 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 62, 27 |
Conread position: | 214-400 |
Cow position: | chr13:20876678-20876492 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 140 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 145, 43 |
Conread position: | 220-400 |
Cow position: | chr13:20243806-20243983 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 131 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 123, 37 |
Conread position: | 221-390 |
Cow position: | chr13:1364300-1364141 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 129 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 39, 16 |
Conread position: | 223-402 |
Cow position: | chr13:27795821-27795995 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 141 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 227-402 |
Cow position: | chr13:57746271-57746448 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 150 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 29, 16 |
Conread position: | 249-402 |
Cow position: | chr13:18541402-18541550 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 118 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 254-398 |
Cow position: | chr13:51177602-51177746 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 113 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 266-398 |
Cow position: | chr13:22976837-22976703 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 102 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 266-400 |
Cow position: | chr13:3564145-3564010 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 105 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 62, 117 |
Conread position: | 266-402 |
Cow position: | chr13:62169957-62170092 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 102 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 277-398 |
Cow position: | chr13:33503014-33503134 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 100 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 282-397 |
Cow position: | chr13:39488069-39488184 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 90 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 282-400 |
Cow position: | chr13:25877583-25877701 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 94 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 288-400 |
Cow position: | chr13:20496476-20496364 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 94 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 292-400 |
Cow position: | chr13:17406009-17406115 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 90 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 294-402 |
Cow position: | chr13:12635068-12635177 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 90 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 42, 25 |
Show alignments to all cow chromosomes.