Cow genome map

Conread name: rcte04_l7.y1

Conread position: 1-203
Cow position:
Alignm length: 205
Alignm identity: 157
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 133, 53

Conread position: 1-302
Cow position:
Alignm length: 314
Alignm identity: 226
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 11, 69

Conread position: 1-303
Cow position:
Alignm length: 316
Alignm identity: 226
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 197, 70

Conread position: 1-371
Cow position:
Alignm length: 373
Alignm identity: 265
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 133, 62

Conread position: 1-400
Cow position:
Alignm length: 409
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 68

Conread position: 1-400
Cow position:
Alignm length: 410
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 67

Conread position: 1-400
Cow position:
Alignm length: 408
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 67

Conread position: 1-400
Cow position:
Alignm length: 406
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 25

Conread position: 1-400
Cow position:
Alignm length: 405
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 60

Conread position: 1-400
Cow position:
Alignm length: 406
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 34

Conread position: 1-401
Cow position:
Alignm length: 410
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 19

Conread position: 3-402
Cow position:
Alignm length: 404
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 17

Conread position: 5-312
Cow position:
Alignm length: 313
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 65

Conread position: 10-383
Cow position:
Alignm length: 379
Alignm identity: 261
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 13, 60

Conread position: 11-341
Cow position:
Alignm length: 339
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 55

Conread position: 11-343
Cow position:
Alignm length: 334
Alignm identity: 231
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 319, 50

Conread position: 11-400
Cow position:
Alignm length: 393
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 9

Conread position: 11-400
Cow position:
Alignm length: 394
Alignm identity: 269
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 124, 51

Conread position: 11-401
Cow position:
Alignm length: 397
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 60

Conread position: 11-402
Cow position:
Alignm length: 395
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 56

Conread position: 15-287
Cow position:
Alignm length: 277
Alignm identity: 199
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 128, 53

Conread position: 27-326
Cow position:
Alignm length: 308
Alignm identity: 225
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 109, 34

Conread position: 69-292
Cow position:
Alignm length: 227
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 10, 103

Conread position: 71-401
Cow position:
Alignm length: 343
Alignm identity: 226
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 65, 103

Conread position: 77-398
Cow position:
Alignm length: 333
Alignm identity: 235
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 59, 26

Conread position: 77-400
Cow position:
Alignm length: 329
Alignm identity: 243
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 64, 96

Conread position: 79-400
Cow position:
Alignm length: 323
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 23

Conread position: 90-383
Cow position:
Alignm length: 299
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 158

Conread position: 94-399
Cow position:
Alignm length: 313
Alignm identity: 206
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 25

Conread position: 95-353
Cow position:
Alignm length: 268
Alignm identity: 188
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 46, 75

Conread position: 96-400
Cow position:
Alignm length: 307
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 17

Conread position: 96-401
Cow position:
Alignm length: 324
Alignm identity: 228
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 39, 292

Conread position: 101-385
Cow position:
Alignm length: 288
Alignm identity: 210
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 40, 122

Conread position: 104-402
Cow position:
Alignm length: 301
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 9

Conread position: 105-269
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 160

Conread position: 106-400
Cow position:
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 115

Conread position: 121-400
Cow position:
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 102

Conread position: 129-400
Cow position:
Alignm length: 273
Alignm identity: 195
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 79, 40

Conread position: 142-357
Cow position:
Alignm length: 219
Alignm identity: 168
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 63, 43

Conread position: 143-400
Cow position:
Alignm length: 263
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 26

Conread position: 146-400
Cow position:
Alignm length: 257
Alignm identity: 194
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 27, 59

Conread position: 146-400
Cow position:
Alignm length: 256
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 74

Conread position: 147-336
Cow position:
Alignm length: 194
Alignm identity: 154
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 58, 77

Conread position: 147-400
Cow position:
Alignm length: 254
Alignm identity: 191
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 57, 0

Conread position: 149-397
Cow position:
Alignm length: 249
Alignm identity: 172
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 108, 0

Conread position: 149-400
Cow position:
Alignm length: 254
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 59

Conread position: 166-400
Cow position:
Alignm length: 236
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 75

Conread position: 173-328
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 5

Conread position: 174-400
Cow position:
Alignm length: 228
Alignm identity: 178
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 33, 47

Conread position: 182-398
Cow position:
Alignm length: 217
Alignm identity: 164
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 77, 0

Conread position: 191-349
Cow position:
Alignm length: 159
Alignm identity: 131
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 5, 0

Conread position: 198-400
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 199-400
Cow position:
Alignm length: 202
Alignm identity: 155
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 44, 0

Conread position: 203-398
Cow position:
Alignm length: 197
Alignm identity: 152
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 67, 35

Conread position: 219-400
Cow position:
Alignm length: 183
Alignm identity: 144
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 159, 24

Conread position: 224-400
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 225-393
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 75

Conread position: 225-400
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 81

Conread position: 242-402
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 59

Conread position: 243-400
Cow position:
Alignm length: 159
Alignm identity: 133
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 17, 0

Conread position: 245-400
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 64

Conread position: 268-396
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 83

Conread position: 268-400
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 271-398
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 103

Conread position: 272-400
Cow position:
Alignm length: 131
Alignm identity: 106
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 48, 29

Conread position: 275-371
Cow position:
Alignm length: 97
Alignm identity: 81
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 276-398
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 278-400
Cow position:
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 0

Show alignments to all cow chromosomes.