Cow genome map

Conread name: rcte04_l7.y1

Conread position: 1-274
Cow position:
Alignm length: 276
Alignm identity: 198
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 22, 70

Conread position: 1-354
Cow position:
Alignm length: 368
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 46

Conread position: 1-400
Cow position:
Alignm length: 403
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 35

Conread position: 1-400
Cow position:
Alignm length: 405
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 60

Conread position: 1-400
Cow position:
Alignm length: 404
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 22

Conread position: 2-221
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 134, 18

Conread position: 2-399
Cow position:
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 43

Conread position: 3-400
Cow position:
Alignm length: 403
Alignm identity: 266
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 120, 47

Conread position: 3-402
Cow position:
Alignm length: 402
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 72

Conread position: 8-400
Cow position:
Alignm length: 393
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 8-402
Cow position:
Alignm length: 408
Alignm identity: 272
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 72

Conread position: 9-247
Cow position:
Alignm length: 247
Alignm identity: 169
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 127, 15

Conread position: 9-399
Cow position:
Alignm length: 396
Alignm identity: 277
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 9, 30

Conread position: 11-254
Cow position:
Alignm length: 247
Alignm identity: 172
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 10, 56

Conread position: 11-382
Cow position:
Alignm length: 375
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 51

Conread position: 11-398
Cow position:
Alignm length: 391
Alignm identity: 277
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 49

Conread position: 11-400
Cow position:
Alignm length: 395
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 59

Conread position: 11-401
Cow position:
Alignm length: 397
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 50

Conread position: 13-382
Cow position:
Alignm length: 379
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 57

Conread position: 13-402
Cow position:
Alignm length: 396
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 63

Conread position: 20-400
Cow position:
Alignm length: 384
Alignm identity: 265
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 116, 42

Conread position: 20-400
Cow position:
Alignm length: 391
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 41

Conread position: 25-373
Cow position:
Alignm length: 350
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 217, 58

Conread position: 26-400
Cow position:
Alignm length: 382
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 50

Conread position: 28-231
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 29-384
Cow position:
Alignm length: 360
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 31

Conread position: 30-313
Cow position:
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 46

Conread position: 30-400
Cow position:
Alignm length: 373
Alignm identity: 259
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 106, 20

Conread position: 30-400
Cow position:
Alignm length: 384
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 88

Conread position: 39-383
Cow position:
Alignm length: 350
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 37

Conread position: 58-400
Cow position:
Alignm length: 348
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 25

Conread position: 60-400
Cow position:
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 69-286
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 65, 172

Conread position: 72-400
Cow position:
Alignm length: 335
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 71

Conread position: 73-383
Cow position:
Alignm length: 320
Alignm identity: 233
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 9, 65

Conread position: 76-324
Cow position:
Alignm length: 257
Alignm identity: 183
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 24, 38

Conread position: 90-398
Cow position:
Alignm length: 311
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 55

Conread position: 92-332
Cow position:
Alignm length: 248
Alignm identity: 180
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 13, 149

Conread position: 95-385
Cow position:
Alignm length: 296
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 24

Conread position: 96-400
Cow position:
Alignm length: 309
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 151

Conread position: 96-400
Cow position:
Alignm length: 307
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 112

Conread position: 96-400
Cow position:
Alignm length: 308
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 125

Conread position: 101-400
Cow position:
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 72

Conread position: 105-397
Cow position:
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 145

Conread position: 123-311
Cow position:
Alignm length: 194
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 10

Conread position: 133-402
Cow position:
Alignm length: 290
Alignm identity: 216
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 10, 42

Conread position: 136-400
Cow position:
Alignm length: 269
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 124

Conread position: 141-402
Cow position:
Alignm length: 263
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 34

Conread position: 146-398
Cow position:
Alignm length: 258
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 116

Conread position: 147-342
Cow position:
Alignm length: 199
Alignm identity: 151
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 60, 30

Conread position: 149-400
Cow position:
Alignm length: 260
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 24

Conread position: 158-384
Cow position:
Alignm length: 238
Alignm identity: 172
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 47, 27

Conread position: 158-400
Cow position:
Alignm length: 251
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 28

Conread position: 158-400
Cow position:
Alignm length: 245
Alignm identity: 182
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 7, 16

Conread position: 159-400
Cow position:
Alignm length: 242
Alignm identity: 179
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 46, 0

Conread position: 163-305
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 163-369
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 172-400
Cow position:
Alignm length: 232
Alignm identity: 175
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 34, 51

Conread position: 173-400
Cow position:
Alignm length: 231
Alignm identity: 173
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 29, 93

Conread position: 174-400
Cow position:
Alignm length: 237
Alignm identity: 178
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 31, 49

Conread position: 192-386
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 77, 151

Conread position: 193-400
Cow position:
Alignm length: 210
Alignm identity: 171
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 9, 42

Conread position: 194-400
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 15, 27

Conread position: 214-373
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 218-400
Cow position:
Alignm length: 183
Alignm identity: 142
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 236-400
Cow position:
Alignm length: 165
Alignm identity: 139
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 7, 0

Conread position: 246-400
Cow position:
Alignm length: 155
Alignm identity: 123
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 247-400
Cow position:
Alignm length: 154
Alignm identity: 126
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 10, 0

Conread position: 250-402
Cow position:
Alignm length: 153
Alignm identity: 109
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 259-398
Cow position:
Alignm length: 140
Alignm identity: 118
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 265-400
Cow position:
Alignm length: 136
Alignm identity: 114
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 266-398
Cow position:
Alignm length: 135
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 65, 39

Conread position: 271-398
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 275-400
Cow position:
Alignm length: 126
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 284-400
Cow position:
Alignm length: 117
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 296-400
Cow position:
Alignm length: 105
Alignm identity: 87
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.