Cow genome map


           Conread name:
           rcte04_l7.y1
        

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               131, 45
               

               Conread position:
               1-275
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               26, 60
               

               Conread position:
               1-397
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 64
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 63
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 19
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 73
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 48
               

               Conread position:
               1-402
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 58
               

               Conread position:
               3-398
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 72
               

               Conread position:
               8-251
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               12, 77
               

               Conread position:
               8-400
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 68
               

               Conread position:
               9-196
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               10-400
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 10
               

               Conread position:
               11-254
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               12, 19
               

               Conread position:
               15-383
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 54
               

               Conread position:
               15-400
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 73
               

               Conread position:
               15-400
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 50
               

               Conread position:
               16-400
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 24
               

               Conread position:
               31-326
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               103, 33
               

               Conread position:
               50-235
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 134
               

               Conread position:
               60-400
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               246
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               269, 72
               

               Conread position:
               70-402
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 23
               

               Conread position:
               71-393
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 152
               

               Conread position:
               77-397
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 168
               

               Conread position:
               77-400
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 194
               

               Conread position:
               78-293
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               91-402
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               45, 133
               

               Conread position:
               93-400
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               9, 81
               

               Conread position:
               100-400
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 69
               

               Conread position:
               104-397
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 123
               

               Conread position:
               104-400
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 136
               

               Conread position:
               113-402
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 126
               

               Conread position:
               122-400
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 44
               

               Conread position:
               124-325
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               11, 60
               

               Conread position:
               124-379
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 18
               

               Conread position:
               131-298
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               5, 112
               

               Conread position:
               133-400
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               136-397
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 109
               

               Conread position:
               146-400
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               193
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               61, 97
               

               Conread position:
               147-400
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               58, 7
               

               Conread position:
               158-400
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               192
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               7, 27
               

               Conread position:
               161-397
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               168-400
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               37, 55
               

               Conread position:
               183-400
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               70, 27
               

               Conread position:
               184-400
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               189-344
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               16, 57
               

               Conread position:
               189-398
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 51
               

               Conread position:
               194-397
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               41, 70
               

               Conread position:
               201-400
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               202-402
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               205-400
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               207-402
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               160, 35
               

               Conread position:
               209-400
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               215-389
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               234-398
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               9, 26
               

               Conread position:
               248-398
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               253-400
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               41, 15
               

               Conread position:
               258-398
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               9, 70
               

               Conread position:
               259-383
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               260-398
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               264-400
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               266-400
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               267-400
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               277-400
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               283-400
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               292-400
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               33, 0
               
Show alignments to all cow chromosomes.