Cow genome map
Conread name: | rcte04_l7.y1 |
Conread position: | 1-216 |
Cow position: | chr2:37003499-37003707 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 160 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 130, 19 |
Conread position: | 1-372 |
Cow position: | chr2:32393606-32393947 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 274 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 52, 61 |
Conread position: | 1-383 |
Cow position: | chr2:53716778-53716419 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 201, 67 |
Conread position: | 1-398 |
Cow position: | chr2:21697526-21697140 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 65 |
Conread position: | 1-398 |
Cow position: | chr2:43345089-43344700 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 22 |
Conread position: | 1-400 |
Cow position: | chr2:3182310-3181928 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 65 |
Conread position: | 1-400 |
Cow position: | chr2:7211997-7212381 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 38 |
Conread position: | 1-401 |
Cow position: | chr2:47746425-47746808 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 52 |
Conread position: | 1-402 |
Cow position: | chr2:13048416-13048797 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 69 |
Conread position: | 2-328 |
Cow position: | chr2:20281687-20282011 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 34 |
Conread position: | 9-348 |
Cow position: | chr2:9242916-9243236 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 233 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 14, 62 |
Conread position: | 9-400 |
Cow position: | chr2:7779271-7778899 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 45 |
Conread position: | 9-400 |
Cow position: | chr2:74848052-74848456 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 51 |
Conread position: | 10-396 |
Cow position: | chr2:62563781-62563410 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 278 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 36, 77 |
Conread position: | 10-398 |
Cow position: | chr2:74387909-74387541 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 56 |
Conread position: | 10-402 |
Cow position: | chr2:9043403-9043785 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 58 |
Conread position: | 11-400 |
Cow position: | chr2:4830610-4830246 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 272 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 24, 61 |
Conread position: | 11-400 |
Cow position: | chr2:14037496-14037136 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 55 |
Conread position: | 12-400 |
Cow position: | chr2:33791270-33790894 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 43 |
Conread position: | 13-398 |
Cow position: | chr2:72599034-72599402 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 47 |
Conread position: | 15-290 |
Cow position: | chr2:42286283-42286019 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 210 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 121, 53 |
Conread position: | 15-383 |
Cow position: | chr2:41490849-41491212 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 31 |
Conread position: | 15-400 |
Cow position: | chr2:82828152-82827791 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 195, 19 |
Conread position: | 20-400 |
Cow position: | chr2:4927849-4927488 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 271 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 116, 40 |
Conread position: | 20-400 |
Cow position: | chr2:39196548-39196199 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 271 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 168, 39 |
Conread position: | 24-247 |
Cow position: | chr2:62674024-62673816 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 159 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 111, 37 |
Conread position: | 43-326 |
Cow position: | chr2:57501474-57501744 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 201 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 131, 23 |
Conread position: | 69-371 |
Cow position: | chr2:4478052-4478367 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 223 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 72-390 |
Cow position: | chr2:39411904-39412225 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 242 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 64, 186 |
Conread position: | 72-398 |
Cow position: | chr2:23062653-23062336 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 10 |
Conread position: | 72-400 |
Cow position: | chr2:68962832-68962522 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 236 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 7, 91 |
Conread position: | 74-402 |
Cow position: | chr2:62463739-62463402 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 75 |
Conread position: | 75-400 |
Cow position: | chr2:3544332-3544011 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 10 |
Conread position: | 78-305 |
Cow position: | chr2:77968241-77968015 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 167 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 57, 7 |
Conread position: | 78-397 |
Cow position: | chr2:52347504-52347190 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 7 |
Conread position: | 81-400 |
Cow position: | chr2:23811402-23811687 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 237 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 55, 87 |
Conread position: | 81-400 |
Cow position: | chr2:63287874-63287567 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 234 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 62, 38 |
Conread position: | 90-371 |
Cow position: | chr2:80604052-80603768 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 158 |
Conread position: | 91-400 |
Cow position: | chr2:5767756-5767464 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 231 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 114, 41 |
Conread position: | 93-400 |
Cow position: | chr2:10566604-10566889 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 218 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 149, 49 |
Conread position: | 99-398 |
Cow position: | chr2:7365932-7365639 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 27 |
Conread position: | 114-400 |
Cow position: | chr2:13684901-13685178 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 110 |
Conread position: | 114-400 |
Cow position: | chr2:52183256-52183536 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 128 |
Conread position: | 118-402 |
Cow position: | chr2:40370460-40370189 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 127 |
Conread position: | 121-362 |
Cow position: | chr2:44983360-44983117 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 119 |
Conread position: | 122-400 |
Cow position: | chr2:18274356-18274078 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 137 |
Conread position: | 122-400 |
Cow position: | chr2:69982679-69982944 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 207 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 14, 66 |
Conread position: | 124-302 |
Cow position: | chr2:76055077-76054902 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 131 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 85, 23 |
Conread position: | 124-402 |
Cow position: | chr2:56823013-56822743 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 208 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 60, 10 |
Conread position: | 128-400 |
Cow position: | chr2:41417915-41417650 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 98 |
Conread position: | 133-400 |
Cow position: | chr2:46130610-46130343 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 112 |
Conread position: | 135-400 |
Cow position: | chr2:31420318-31420589 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 24 |
Conread position: | 141-352 |
Cow position: | chr2:38583592-38583378 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 168 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 65, 88 |
Conread position: | 141-400 |
Cow position: | chr2:19750663-19750918 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 204 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 64, 22 |
Conread position: | 142-402 |
Cow position: | chr2:11736740-11736990 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 193 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 20, 39 |
Conread position: | 143-397 |
Cow position: | chr2:27782847-27782588 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 193 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 62, 76 |
Conread position: | 143-400 |
Cow position: | chr2:18759830-18760071 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 197 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 113, 43 |
Conread position: | 145-398 |
Cow position: | chr2:45680938-45681198 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 183 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 112, 0 |
Conread position: | 146-364 |
Cow position: | chr2:3730445-3730660 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 173 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 59, 77 |
Conread position: | 146-402 |
Cow position: | chr2:49441170-49441419 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 196 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 55, 22 |
Conread position: | 147-397 |
Cow position: | chr2:12777233-12776991 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 76 |
Conread position: | 151-386 |
Cow position: | chr2:19130497-19130722 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 182 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 151-401 |
Cow position: | chr2:15273539-15273300 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 185 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 58, 93 |
Conread position: | 154-401 |
Cow position: | chr2:9709807-9710052 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 188 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 35, 40 |
Conread position: | 160-384 |
Cow position: | chr2:47962629-47962419 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 161 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 45, 54 |
Conread position: | 163-398 |
Cow position: | chr2:38805999-38805765 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 76 |
Conread position: | 168-352 |
Cow position: | chr2:18249249-18249075 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 148 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 34, 72 |
Conread position: | 186-400 |
Cow position: | chr2:51826787-51826586 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 165 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 23, 37 |
Conread position: | 194-400 |
Cow position: | chr2:25112522-25112720 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 158 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 7, 23 |
Conread position: | 204-400 |
Cow position: | chr2:53280772-53280970 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 156 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 53, 39 |
Conread position: | 207-400 |
Cow position: | chr2:43000887-43000705 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 145 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 63, 35 |
Conread position: | 208-398 |
Cow position: | chr2:20534229-20534042 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 155 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 83, 38 |
Conread position: | 211-387 |
Cow position: | chr2:73205032-73204857 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 142 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 223-400 |
Cow position: | chr2:78912392-78912218 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 142 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 53, 14 |
Conread position: | 243-398 |
Cow position: | chr2:16522031-16522186 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 129 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 22, 137 |
Conread position: | 243-398 |
Cow position: | chr2:54468939-54468784 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 118 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 16, 104 |
Conread position: | 247-397 |
Cow position: | chr2:12910623-12910774 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 118 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 254-400 |
Cow position: | chr2:59592562-59592417 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 119 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 259-402 |
Cow position: | chr2:36213904-36213762 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 116 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 264-396 |
Cow position: | chr2:45470940-45471075 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 103 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 266-400 |
Cow position: | chr2:71121693-71121827 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 111 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 267-400 |
Cow position: | chr2:9412416-9412550 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 102 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 69, 25 |
Conread position: | 270-401 |
Cow position: | chr2:6837085-6836947 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 108 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 271-398 |
Cow position: | chr2:37155547-37155422 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 108 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 277-400 |
Cow position: | chr2:56017760-56017635 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 98 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 286-401 |
Cow position: | chr2:30906360-30906244 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 92 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 297-400 |
Cow position: | chr2:29410991-29411094 (view UCSC Genome Browser custom track) |
Alignm length: | 105 |
Alignm identity: | 87 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 23, 12 |
Conread position: | 320-400 |
Cow position: | chr2:77968038-77967958 (view UCSC Genome Browser custom track) |
Alignm length: | 81 |
Alignm identity: | 72 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.