Cow genome map


           Conread name:
           rcte04_l7.y1
        

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               130, 19
               

               Conread position:
               1-372
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               274
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               52, 61
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 67
               

               Conread position:
               1-398
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 65
               

               Conread position:
               1-398
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 22
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 65
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 38
               

               Conread position:
               1-401
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               1-402
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 69
               

               Conread position:
               2-328
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 34
               

               Conread position:
               9-348
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               14, 62
               

               Conread position:
               9-400
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 45
               

               Conread position:
               9-400
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 51
               

               Conread position:
               10-396
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               278
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               36, 77
               

               Conread position:
               10-398
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 56
               

               Conread position:
               10-402
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 58
               

               Conread position:
               11-400
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               272
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               24, 61
               

               Conread position:
               11-400
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 55
               

               Conread position:
               12-400
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 43
               

               Conread position:
               13-398
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 47
               

               Conread position:
               15-290
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               210
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               121, 53
               

               Conread position:
               15-383
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 31
               

               Conread position:
               15-400
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 19
               

               Conread position:
               20-400
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               271
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               116, 40
               

               Conread position:
               20-400
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               271
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               168, 39
               

               Conread position:
               24-247
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               111, 37
               

               Conread position:
               43-326
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               131, 23
               

               Conread position:
               69-371
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               72-390
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               64, 186
               

               Conread position:
               72-398
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 10
               

               Conread position:
               72-400
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               7, 91
               

               Conread position:
               74-402
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 75
               

               Conread position:
               75-400
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 10
               

               Conread position:
               78-305
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               57, 7
               

               Conread position:
               78-397
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 7
               

               Conread position:
               81-400
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               55, 87
               

               Conread position:
               81-400
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               62, 38
               

               Conread position:
               90-371
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 158
               

               Conread position:
               91-400
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               231
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               114, 41
               

               Conread position:
               93-400
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               149, 49
               

               Conread position:
               99-398
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 27
               

               Conread position:
               114-400
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 110
               

               Conread position:
               114-400
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 128
               

               Conread position:
               118-402
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 127
               

               Conread position:
               121-362
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 119
               

               Conread position:
               122-400
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 137
               

               Conread position:
               122-400
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               14, 66
               

               Conread position:
               124-302
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               85, 23
               

               Conread position:
               124-402
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               60, 10
               

               Conread position:
               128-400
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 98
               

               Conread position:
               133-400
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 112
               

               Conread position:
               135-400
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 24
               

               Conread position:
               141-352
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               65, 88
               

               Conread position:
               141-400
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               64, 22
               

               Conread position:
               142-402
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               20, 39
               

               Conread position:
               143-397
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               143-400
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               113, 43
               

               Conread position:
               145-398
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               146-364
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               59, 77
               

               Conread position:
               146-402
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               55, 22
               

               Conread position:
               147-397
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 76
               

               Conread position:
               151-386
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               182
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               151-401
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               58, 93
               

               Conread position:
               154-401
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               35, 40
               

               Conread position:
               160-384
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               45, 54
               

               Conread position:
               163-398
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 76
               

               Conread position:
               168-352
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               34, 72
               

               Conread position:
               186-400
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               23, 37
               

               Conread position:
               194-400
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               7, 23
               

               Conread position:
               204-400
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               53, 39
               

               Conread position:
               207-400
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               63, 35
               

               Conread position:
               208-398
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               155
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               83, 38
               

               Conread position:
               211-387
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               223-400
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               243-398
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               22, 137
               

               Conread position:
               243-398
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               16, 104
               

               Conread position:
               247-397
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               254-400
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               259-402
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               264-396
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               266-400
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               267-400
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               69, 25
               

               Conread position:
               270-401
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               271-398
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               277-400
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               286-401
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               297-400
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               23, 12
               

               Conread position:
               320-400
               

               Cow position:
               
               

               Alignm length:
               81
               

               Alignm identity:
               72
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.