Cow genome map

Conread name: rcte04_l7.y1

Conread position: 1-355
Cow position: chr28:24468238-24468594 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 62

Conread position: 1-398
Cow position: chr28:15349667-15350042 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 46

Conread position: 1-398
Cow position: chr28:22360845-22361216 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 64

Conread position: 1-398
Cow position: chr28:26626964-26626600 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 5

Conread position: 1-400
Cow position: chr28:2340744-2341129 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 22

Conread position: 1-400
Cow position: chr28:28630781-28631154 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 39

Conread position: 1-402
Cow position: chr28:22614120-22614488 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-402
Cow position: chr28:34347048-34346662 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 26

Conread position: 2-400
Cow position: chr28:34117292-34117684 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 64

Conread position: 4-371
Cow position: chr28:6355279-6355634 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 250
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 57

Conread position: 5-360
Cow position: chr28:32284789-32284446 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 249
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 108, 24

Conread position: 8-400
Cow position: chr28:17762556-17762949 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 278
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 10, 64

Conread position: 9-244
Cow position: chr28:480515-480288 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 125, 77

Conread position: 9-313
Cow position: chr28:23390547-23390839 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 216
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 53, 38

Conread position: 11-266
Cow position: chr28:16805252-16805012 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 109, 50

Conread position: 12-301
Cow position: chr28:11379582-11379291 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 220
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 122, 52

Conread position: 12-362
Cow position: chr28:12226330-12225996 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 240
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 11, 50

Conread position: 15-318
Cow position: chr28:17598826-17598505 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 88, 55

Conread position: 40-400
Cow position: chr28:5912611-5912250 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 12

Conread position: 69-398
Cow position: chr28:7799925-7799610 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 63

Conread position: 70-400
Cow position: chr28:31994387-31994041 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 23

Conread position: 76-339
Cow position: chr28:6277246-6276991 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 60, 14

Conread position: 90-400
Cow position: chr28:10647806-10647497 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 97

Conread position: 134-289
Cow position: chr28:5047535-5047685 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 79

Conread position: 142-399
Cow position: chr28:8172908-8172672 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 197
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 65, 0

Conread position: 142-400
Cow position: chr28:3898380-3898628 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 61, 125

Conread position: 142-400
Cow position: chr28:20095211-20095478 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 152

Conread position: 146-400
Cow position: chr28:4803126-4802879 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 60, 122

Conread position: 148-320
Cow position: chr28:17482604-17482439 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 55, 94

Conread position: 169-336
Cow position: chr28:22339760-22339924 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 51

Conread position: 175-400
Cow position: chr28:16251887-16251668 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 58

Conread position: 186-400
Cow position: chr28:6103093-6103303 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 16, 36

Conread position: 201-402
Cow position: chr28:25926718-25926915 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 42

Conread position: 203-402
Cow position: chr28:7592600-7592783 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 237-402
Cow position: chr28:11379275-11379113 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 107, 0

Conread position: 258-398
Cow position: chr28:11284082-11283941 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 107, 0

Conread position: 269-399
Cow position: chr28:27890324-27890193 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 106, 0

Conread position: 271-400
Cow position: chr28:16804807-16804678 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 107
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 273-400
Cow position: chr28:16241233-16241106 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 112
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 276-399
Cow position: chr28:22831051-22831174 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 110
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 278-402
Cow position: chr28:25191789-25191666 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 281-397
Cow position: chr28:12384495-12384611 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 282-400
Cow position: chr28:5050692-5050809 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 292-400
Cow position: chr28:34338240-34338348 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.