Cow genome map
Conread name: | rcte04_l7.y1 |
Conread position: | 1-355 |
Cow position: | chr28:24468238-24468594 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 62 |
Conread position: | 1-398 |
Cow position: | chr28:15349667-15350042 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 46 |
Conread position: | 1-398 |
Cow position: | chr28:22360845-22361216 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 64 |
Conread position: | 1-398 |
Cow position: | chr28:26626964-26626600 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 5 |
Conread position: | 1-400 |
Cow position: | chr28:2340744-2341129 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 22 |
Conread position: | 1-400 |
Cow position: | chr28:28630781-28631154 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 39 |
Conread position: | 1-402 |
Cow position: | chr28:22614120-22614488 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-402 |
Cow position: | chr28:34347048-34346662 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 204, 26 |
Conread position: | 2-400 |
Cow position: | chr28:34117292-34117684 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 64 |
Conread position: | 4-371 |
Cow position: | chr28:6355279-6355634 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 250 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 19, 57 |
Conread position: | 5-360 |
Cow position: | chr28:32284789-32284446 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 249 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 108, 24 |
Conread position: | 8-400 |
Cow position: | chr28:17762556-17762949 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 278 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 10, 64 |
Conread position: | 9-244 |
Cow position: | chr28:480515-480288 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 164 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 125, 77 |
Conread position: | 9-313 |
Cow position: | chr28:23390547-23390839 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 216 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 53, 38 |
Conread position: | 11-266 |
Cow position: | chr28:16805252-16805012 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 189 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 109, 50 |
Conread position: | 12-301 |
Cow position: | chr28:11379582-11379291 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 220 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 122, 52 |
Conread position: | 12-362 |
Cow position: | chr28:12226330-12225996 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 240 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 11, 50 |
Conread position: | 15-318 |
Cow position: | chr28:17598826-17598505 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 226 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 88, 55 |
Conread position: | 40-400 |
Cow position: | chr28:5912611-5912250 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 12 |
Conread position: | 69-398 |
Cow position: | chr28:7799925-7799610 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 63 |
Conread position: | 70-400 |
Cow position: | chr28:31994387-31994041 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 23 |
Conread position: | 76-339 |
Cow position: | chr28:6277246-6276991 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 200 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 60, 14 |
Conread position: | 90-400 |
Cow position: | chr28:10647806-10647497 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 97 |
Conread position: | 134-289 |
Cow position: | chr28:5047535-5047685 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 117 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 9, 79 |
Conread position: | 142-399 |
Cow position: | chr28:8172908-8172672 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 197 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 142-400 |
Cow position: | chr28:3898380-3898628 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 187 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 61, 125 |
Conread position: | 142-400 |
Cow position: | chr28:20095211-20095478 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 152 |
Conread position: | 146-400 |
Cow position: | chr28:4803126-4802879 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 178 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 60, 122 |
Conread position: | 148-320 |
Cow position: | chr28:17482604-17482439 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 130 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 55, 94 |
Conread position: | 169-336 |
Cow position: | chr28:22339760-22339924 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 128 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 38, 51 |
Conread position: | 175-400 |
Cow position: | chr28:16251887-16251668 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 184 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 58 |
Conread position: | 186-400 |
Cow position: | chr28:6103093-6103303 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 168 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 16, 36 |
Conread position: | 201-402 |
Cow position: | chr28:25926718-25926915 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 164 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 42 |
Conread position: | 203-402 |
Cow position: | chr28:7592600-7592783 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 153 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 237-402 |
Cow position: | chr28:11379275-11379113 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 131 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 258-398 |
Cow position: | chr28:11284082-11283941 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 116 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 269-399 |
Cow position: | chr28:27890324-27890193 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 107 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 106, 0 |
Conread position: | 271-400 |
Cow position: | chr28:16804807-16804678 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 107 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 273-400 |
Cow position: | chr28:16241233-16241106 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 112 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 276-399 |
Cow position: | chr28:22831051-22831174 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 110 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 278-402 |
Cow position: | chr28:25191789-25191666 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 96 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 281-397 |
Cow position: | chr28:12384495-12384611 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 97 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 282-400 |
Cow position: | chr28:5050692-5050809 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 92 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 292-400 |
Cow position: | chr28:34338240-34338348 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 91 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.