Cow genome map

Conread name: rcte04_l7.y1

Conread position: 1-225
Cow position:
Alignm length: 230
Alignm identity: 164
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 135, 19

Conread position: 1-289
Cow position:
Alignm length: 289
Alignm identity: 207
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 1-325
Cow position:
Alignm length: 333
Alignm identity: 220
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 185, 19

Conread position: 1-338
Cow position:
Alignm length: 343
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 72

Conread position: 1-389
Cow position:
Alignm length: 399
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 19

Conread position: 1-397
Cow position:
Alignm length: 407
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 69

Conread position: 1-397
Cow position:
Alignm length: 401
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 19

Conread position: 1-398
Cow position:
Alignm length: 402
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 70

Conread position: 1-400
Cow position:
Alignm length: 402
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 19

Conread position: 1-400
Cow position:
Alignm length: 404
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 132

Conread position: 1-400
Cow position:
Alignm length: 406
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 64

Conread position: 1-402
Cow position:
Alignm length: 405
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 61

Conread position: 3-400
Cow position:
Alignm length: 404
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 58

Conread position: 3-400
Cow position:
Alignm length: 398
Alignm identity: 279
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 59, 0

Conread position: 4-248
Cow position:
Alignm length: 252
Alignm identity: 167
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 8-400
Cow position:
Alignm length: 398
Alignm identity: 268
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 128, 54

Conread position: 9-240
Cow position:
Alignm length: 237
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 82

Conread position: 9-241
Cow position:
Alignm length: 241
Alignm identity: 162
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 10, 60

Conread position: 9-399
Cow position:
Alignm length: 395
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 54

Conread position: 11-199
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 123, 48

Conread position: 11-398
Cow position:
Alignm length: 400
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 23

Conread position: 11-400
Cow position:
Alignm length: 401
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 304

Conread position: 11-400
Cow position:
Alignm length: 393
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 57

Conread position: 11-400
Cow position:
Alignm length: 412
Alignm identity: 288
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 87, 51

Conread position: 13-195
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 71

Conread position: 13-261
Cow position:
Alignm length: 251
Alignm identity: 178
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 123, 11

Conread position: 14-394
Cow position:
Alignm length: 386
Alignm identity: 258
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 78

Conread position: 14-395
Cow position:
Alignm length: 390
Alignm identity: 256
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 58

Conread position: 15-400
Cow position:
Alignm length: 394
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 43

Conread position: 15-400
Cow position:
Alignm length: 395
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 14

Conread position: 20-402
Cow position:
Alignm length: 387
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 47

Conread position: 22-255
Cow position:
Alignm length: 243
Alignm identity: 178
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 112, 39

Conread position: 24-393
Cow position:
Alignm length: 375
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 37

Conread position: 25-400
Cow position:
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 46

Conread position: 27-387
Cow position:
Alignm length: 372
Alignm identity: 244
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 109, 43

Conread position: 27-402
Cow position:
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 41

Conread position: 32-340
Cow position:
Alignm length: 321
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 102, 35

Conread position: 60-394
Cow position:
Alignm length: 350
Alignm identity: 232
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 45

Conread position: 66-400
Cow position:
Alignm length: 337
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 146

Conread position: 67-400
Cow position:
Alignm length: 349
Alignm identity: 235
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 69, 17

Conread position: 68-398
Cow position:
Alignm length: 341
Alignm identity: 221
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 5, 73

Conread position: 71-394
Cow position:
Alignm length: 330
Alignm identity: 225
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 16, 169

Conread position: 72-383
Cow position:
Alignm length: 324
Alignm identity: 228
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 70, 28

Conread position: 74-380
Cow position:
Alignm length: 312
Alignm identity: 218
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 51, 45

Conread position: 74-400
Cow position:
Alignm length: 333
Alignm identity: 227
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 5, 165

Conread position: 78-393
Cow position:
Alignm length: 325
Alignm identity: 210
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 41

Conread position: 79-393
Cow position:
Alignm length: 321
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 95

Conread position: 82-337
Cow position:
Alignm length: 262
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 158

Conread position: 84-402
Cow position:
Alignm length: 319
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 86-402
Cow position:
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 38

Conread position: 90-344
Cow position:
Alignm length: 260
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 152

Conread position: 90-400
Cow position:
Alignm length: 320
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 92

Conread position: 96-398
Cow position:
Alignm length: 307
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 120

Conread position: 104-400
Cow position:
Alignm length: 298
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 55

Conread position: 106-400
Cow position:
Alignm length: 302
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 157

Conread position: 108-397
Cow position:
Alignm length: 294
Alignm identity: 208
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 28, 51

Conread position: 113-398
Cow position:
Alignm length: 289
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 29

Conread position: 114-398
Cow position:
Alignm length: 292
Alignm identity: 211
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 22, 63

Conread position: 114-400
Cow position:
Alignm length: 293
Alignm identity: 218
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 22, 106

Conread position: 119-400
Cow position:
Alignm length: 284
Alignm identity: 206
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 17, 62

Conread position: 121-361
Cow position:
Alignm length: 246
Alignm identity: 174
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 14, 27

Conread position: 121-400
Cow position:
Alignm length: 283
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 102

Conread position: 121-400
Cow position:
Alignm length: 281
Alignm identity: 212
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 28, 49

Conread position: 123-364
Cow position:
Alignm length: 252
Alignm identity: 193
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 12, 59

Conread position: 128-400
Cow position:
Alignm length: 273
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 139-400
Cow position:
Alignm length: 266
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 84

Conread position: 142-398
Cow position:
Alignm length: 262
Alignm identity: 203
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 20, 47

Conread position: 142-400
Cow position:
Alignm length: 264
Alignm identity: 190
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 73, 66

Conread position: 144-364
Cow position:
Alignm length: 234
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 144-400
Cow position:
Alignm length: 263
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 85

Conread position: 146-342
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 92

Conread position: 146-360
Cow position:
Alignm length: 218
Alignm identity: 173
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 70, 94

Conread position: 149-358
Cow position:
Alignm length: 214
Alignm identity: 152
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 37

Conread position: 150-400
Cow position:
Alignm length: 258
Alignm identity: 186
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 10, 95

Conread position: 153-397
Cow position:
Alignm length: 251
Alignm identity: 192
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 9, 53

Conread position: 177-400
Cow position:
Alignm length: 227
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 63

Conread position: 187-398
Cow position:
Alignm length: 215
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 57

Conread position: 192-344
Cow position:
Alignm length: 157
Alignm identity: 135
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 13, 54

Conread position: 192-400
Cow position:
Alignm length: 210
Alignm identity: 157
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 17, 47

Conread position: 192-400
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 59, 31

Conread position: 192-402
Cow position:
Alignm length: 220
Alignm identity: 170
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 48, 79

Conread position: 197-402
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 72, 13

Conread position: 201-370
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 64, 35

Conread position: 207-392
Cow position:
Alignm length: 189
Alignm identity: 149
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 49, 11

Conread position: 220-400
Cow position:
Alignm length: 181
Alignm identity: 147
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 14, 0

Conread position: 227-398
Cow position:
Alignm length: 173
Alignm identity: 137
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 156, 10

Conread position: 229-397
Cow position:
Alignm length: 171
Alignm identity: 140
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 136, 17

Conread position: 232-372
Cow position:
Alignm length: 141
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 232-400
Cow position:
Alignm length: 170
Alignm identity: 139
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 29, 0

Conread position: 241-400
Cow position:
Alignm length: 161
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 118

Conread position: 246-400
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 248-402
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 249-392
Cow position:
Alignm length: 145
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 254-395
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 254-402
Cow position:
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 269-402
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 271-400
Cow position:
Alignm length: 131
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 272-397
Cow position:
Alignm length: 128
Alignm identity: 99
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 48, 76

Conread position: 277-398
Cow position:
Alignm length: 124
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 71

Conread position: 279-393
Cow position:
Alignm length: 115
Alignm identity: 100
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.