Cow genome map
Conread name: | rcte04_l7.y1 |
Conread position: | 1-241 |
Cow position: | chr4:59565727-59565971 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 178 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 26, 73 |
Conread position: | 1-312 |
Cow position: | chr4:14564725-14564435 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 231 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 32, 94 |
Conread position: | 1-398 |
Cow position: | chr4:39646865-39647229 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 281 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 135, 28 |
Conread position: | 1-400 |
Cow position: | chr4:5188822-5188433 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 66 |
Conread position: | 1-400 |
Cow position: | chr4:57222033-57221641 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 20 |
Conread position: | 1-401 |
Cow position: | chr4:29067453-29067077 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 61 |
Conread position: | 2-185 |
Cow position: | chr4:27444026-27444207 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 141 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 25, 61 |
Conread position: | 2-384 |
Cow position: | chr4:47511217-47511589 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 18 |
Conread position: | 2-402 |
Cow position: | chr4:53641516-53641889 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 330, 18 |
Conread position: | 4-271 |
Cow position: | chr4:6793564-6793811 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 191 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 77, 54 |
Conread position: | 4-399 |
Cow position: | chr4:58432774-58432391 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 66 |
Conread position: | 5-368 |
Cow position: | chr4:21162832-21163193 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 58 |
Conread position: | 5-400 |
Cow position: | chr4:34043432-34043026 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 65 |
Conread position: | 9-361 |
Cow position: | chr4:68107164-68106827 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 246 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 126, 16 |
Conread position: | 10-311 |
Cow position: | chr4:2238035-2237750 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 216 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 122, 58 |
Conread position: | 11-395 |
Cow position: | chr4:18803191-18802830 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 261 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 85, 54 |
Conread position: | 11-400 |
Cow position: | chr4:9822347-9822722 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 39 |
Conread position: | 11-402 |
Cow position: | chr4:49741766-49742136 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 65 |
Conread position: | 11-402 |
Cow position: | chr4:60640002-60639637 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 266 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 125, 38 |
Conread position: | 11-402 |
Cow position: | chr4:60662607-60662972 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 270 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 125, 38 |
Conread position: | 12-198 |
Cow position: | chr4:4300729-4300916 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 144 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 84, 58 |
Conread position: | 12-354 |
Cow position: | chr4:46875312-46874971 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 254 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 122, 17 |
Conread position: | 12-401 |
Cow position: | chr4:58856314-58855941 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 273 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 11, 55 |
Conread position: | 15-319 |
Cow position: | chr4:10722608-10722901 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 211 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 8, 56 |
Conread position: | 17-402 |
Cow position: | chr4:41975510-41975145 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 40 |
Conread position: | 37-399 |
Cow position: | chr4:27505347-27505688 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 263 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 99, 33 |
Conread position: | 39-259 |
Cow position: | chr4:4135331-4135547 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 158 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 95, 31 |
Conread position: | 45-400 |
Cow position: | chr4:5783956-5784289 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 17 |
Conread position: | 48-254 |
Cow position: | chr4:35181329-35181538 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 144 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 15, 24 |
Conread position: | 50-400 |
Cow position: | chr4:36759503-36759861 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 26 |
Conread position: | 56-394 |
Cow position: | chr4:9106272-9106609 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 153 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 32, 64 |
Conread position: | 60-397 |
Cow position: | chr4:46151536-46151208 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 230 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 44, 176 |
Conread position: | 69-388 |
Cow position: | chr4:7655013-7655337 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 229 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 72, 12 |
Conread position: | 69-400 |
Cow position: | chr4:20311916-20312243 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 215 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 8, 141 |
Conread position: | 73-400 |
Cow position: | chr4:15046115-15046458 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 252 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 8, 211 |
Conread position: | 75-366 |
Cow position: | chr4:20925753-20925468 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 59 |
Conread position: | 78-277 |
Cow position: | chr4:56218594-56218792 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 145 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 58, 167 |
Conread position: | 78-392 |
Cow position: | chr4:22507126-22506817 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 170 |
Conread position: | 81-400 |
Cow position: | chr4:57652469-57652792 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 19 |
Conread position: | 83-400 |
Cow position: | chr4:34572270-34571954 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 238 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 53, 30 |
Conread position: | 85-302 |
Cow position: | chr4:27228725-27228951 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 153 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 91-377 |
Cow position: | chr4:15283453-15283732 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 206 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 45, 92 |
Conread position: | 91-400 |
Cow position: | chr4:57565953-57565647 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 161 |
Conread position: | 92-310 |
Cow position: | chr4:24713389-24713166 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 169 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 44, 156 |
Conread position: | 92-402 |
Cow position: | chr4:2443624-2443319 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 21 |
Conread position: | 92-402 |
Cow position: | chr4:58873525-58873819 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 225 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 102-249 |
Cow position: | chr4:15120219-15120368 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 109 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 106-398 |
Cow position: | chr4:31003075-31002782 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 140 |
Conread position: | 106-400 |
Cow position: | chr4:47087129-47086824 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 222 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 16, 143 |
Conread position: | 114-367 |
Cow position: | chr4:36662062-36661830 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 183 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 19, 74 |
Conread position: | 122-398 |
Cow position: | chr4:49881711-49881420 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 227 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 14, 158 |
Conread position: | 122-400 |
Cow position: | chr4:25924661-25924386 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 121 |
Conread position: | 124-396 |
Cow position: | chr4:32140968-32140704 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 47 |
Conread position: | 124-400 |
Cow position: | chr4:6630019-6629755 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 207 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 79, 18 |
Conread position: | 136-400 |
Cow position: | chr4:31586285-31586030 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 142-324 |
Cow position: | chr4:51905590-51905773 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 147 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 63, 104 |
Conread position: | 142-400 |
Cow position: | chr4:5978514-5978264 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 178 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 28, 86 |
Conread position: | 142-400 |
Cow position: | chr4:45400977-45401223 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 184 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 66, 16 |
Conread position: | 145-357 |
Cow position: | chr4:62407483-62407691 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 159 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 62, 88 |
Conread position: | 146-402 |
Cow position: | chr4:5886663-5886912 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 103 |
Conread position: | 147-358 |
Cow position: | chr4:54347527-54347738 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 174 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 76 |
Conread position: | 151-318 |
Cow position: | chr4:1059352-1059188 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 124 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 54, 85 |
Conread position: | 152-364 |
Cow position: | chr4:9089751-9089539 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 158 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 51, 96 |
Conread position: | 155-400 |
Cow position: | chr4:4519485-4519724 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 188 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 97, 50 |
Conread position: | 158-400 |
Cow position: | chr4:52597215-52596973 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 11 |
Conread position: | 160-400 |
Cow position: | chr4:9128076-9128323 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 191 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 42, 77 |
Conread position: | 164-369 |
Cow position: | chr4:4192542-4192741 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 159 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 47, 25 |
Conread position: | 169-328 |
Cow position: | chr4:63875736-63875585 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 123 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 35, 76 |
Conread position: | 179-383 |
Cow position: | chr4:27444403-27444611 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 159 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 26, 150 |
Conread position: | 181-400 |
Cow position: | chr4:52697232-52697445 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 164 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 8, 44 |
Conread position: | 186-402 |
Cow position: | chr4:59809587-59809380 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 163 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 19, 118 |
Conread position: | 187-400 |
Cow position: | chr4:58830499-58830302 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 160 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 18, 59 |
Conread position: | 201-386 |
Cow position: | chr4:4029209-4029392 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 153 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 201-402 |
Cow position: | chr4:36856988-36857187 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 147 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 39, 88 |
Conread position: | 203-400 |
Cow position: | chr4:4132903-4133088 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 143 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 123, 44 |
Conread position: | 206-400 |
Cow position: | chr4:67321483-67321665 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 141 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 239-402 |
Cow position: | chr4:22891687-22891523 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 123 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 251-400 |
Cow position: | chr4:23536414-23536562 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 116 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 266-398 |
Cow position: | chr4:6793927-6794058 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 114 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 269-398 |
Cow position: | chr4:59566757-59566887 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 103 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 270-400 |
Cow position: | chr4:61593718-61593589 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 99 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 275-400 |
Cow position: | chr4:23089496-23089370 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 101 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 11, 102 |
Conread position: | 281-392 |
Cow position: | chr4:17177982-17178093 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 96 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.