Cow genome map
| Conread name: | rcte04_l7.y1 |
| Conread position: | 1-285 |
| Cow position: | chr5:25925656-25925379 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 135, 51 |
| Conread position: | 1-334 |
| Cow position: | chr5:57127668-57127992 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 1-341 |
| Cow position: | chr5:56109938-56109605 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 248 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 120, 22 |
| Conread position: | 1-364 |
| Cow position: | chr5:13575545-13575180 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 35 |
| Conread position: | 1-371 |
| Cow position: | chr5:60968640-60969017 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 71 |
| Conread position: | 1-386 |
| Cow position: | chr5:15882237-15881859 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 26 |
| Conread position: | 1-397 |
| Cow position: | chr5:28770480-28770858 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-400 |
| Cow position: | chr5:21146011-21145620 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 19 |
| Conread position: | 1-400 |
| Cow position: | chr5:42587711-42587300 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 66 |
| Conread position: | 1-400 |
| Cow position: | chr5:45912075-45911707 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 285 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 78, 67 |
| Conread position: | 2-226 |
| Cow position: | chr5:62580030-62580241 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 132, 13 |
| Conread position: | 2-267 |
| Cow position: | chr5:53599832-53599581 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 133, 12 |
| Conread position: | 2-398 |
| Cow position: | chr5:23234692-23235065 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 65 |
| Conread position: | 5-388 |
| Cow position: | chr5:63620778-63621142 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 45 |
| Conread position: | 7-245 |
| Cow position: | chr5:50770421-50770189 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 199, 11 |
| Conread position: | 8-402 |
| Cow position: | chr5:37048291-37048651 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 61 |
| Conread position: | 9-235 |
| Cow position: | chr5:6149800-6149577 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 127, 14 |
| Conread position: | 9-251 |
| Cow position: | chr5:55985593-55985354 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 10, 63 |
| Conread position: | 9-400 |
| Cow position: | chr5:38273996-38274390 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 25 |
| Conread position: | 9-400 |
| Cow position: | chr5:40978169-40978566 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 53, 61 |
| Conread position: | 9-400 |
| Cow position: | chr5:57965069-57964708 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 272 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 354, 57 |
| Conread position: | 11-400 |
| Cow position: | chr5:27492939-27493341 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 196 |
| Conread position: | 11-400 |
| Cow position: | chr5:51076404-51076017 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 55 |
| Conread position: | 11-400 |
| Cow position: | chr5:51953099-51953482 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 18 |
| Conread position: | 11-401 |
| Cow position: | chr5:26098440-26098081 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 280 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 123, 48 |
| Conread position: | 12-211 |
| Cow position: | chr5:38911297-38911491 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 131, 55 |
| Conread position: | 12-392 |
| Cow position: | chr5:7584604-7584244 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 124, 62 |
| Conread position: | 14-402 |
| Cow position: | chr5:1305008-1304619 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 51 |
| Conread position: | 17-361 |
| Cow position: | chr5:56741892-56742223 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 49 |
| Conread position: | 23-371 |
| Cow position: | chr5:72755296-72755627 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 120, 42 |
| Conread position: | 29-399 |
| Cow position: | chr5:35583880-35584230 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 105, 47 |
| Conread position: | 51-400 |
| Cow position: | chr5:33570138-33570458 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 29, 63 |
| Conread position: | 66-399 |
| Cow position: | chr5:71278927-71279253 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 59 |
| Conread position: | 67-400 |
| Cow position: | chr5:29431371-29431063 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 71-400 |
| Cow position: | chr5:11235855-11236186 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 241 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 65, 162 |
| Conread position: | 71-400 |
| Cow position: | chr5:12329416-12329091 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 20 |
| Conread position: | 72-400 |
| Cow position: | chr5:14072293-14071976 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 64 |
| Conread position: | 74-400 |
| Cow position: | chr5:35748824-35749143 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 16 |
| Conread position: | 76-402 |
| Cow position: | chr5:67463500-67463822 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 37 |
| Conread position: | 83-402 |
| Cow position: | chr5:15705265-15704957 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 10 |
| Conread position: | 84-398 |
| Cow position: | chr5:58842399-58842706 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 46, 69 |
| Conread position: | 86-386 |
| Cow position: | chr5:34483249-34482958 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 100 |
| Conread position: | 90-229 |
| Cow position: | chr5:10455665-10455804 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 23 |
| Conread position: | 91-282 |
| Cow position: | chr5:26161695-26161511 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 111, 36 |
| Conread position: | 91-400 |
| Cow position: | chr5:26562441-26562742 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 94 |
| Conread position: | 95-267 |
| Cow position: | chr5:37608553-37608732 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 24 |
| Conread position: | 95-397 |
| Cow position: | chr5:10095810-10095512 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 39, 149 |
| Conread position: | 95-402 |
| Cow position: | chr5:27679519-27679214 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 17 |
| Conread position: | 99-400 |
| Cow position: | chr5:28371090-28370808 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 228 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 36, 149 |
| Conread position: | 101-400 |
| Cow position: | chr5:25355312-25355604 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 98 |
| Conread position: | 113-325 |
| Cow position: | chr5:34168463-34168678 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 92, 29 |
| Conread position: | 119-402 |
| Cow position: | chr5:66117216-66116947 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 24, 50 |
| Conread position: | 126-399 |
| Cow position: | chr5:15808583-15808317 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 16 |
| Conread position: | 126-402 |
| Cow position: | chr5:9025510-9025790 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 71 |
| Conread position: | 129-400 |
| Cow position: | chr5:57490487-57490762 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 21, 147 |
| Conread position: | 130-402 |
| Cow position: | chr5:47698053-47697780 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 112 |
| Conread position: | 133-366 |
| Cow position: | chr5:39206953-39206723 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 126 |
| Conread position: | 139-402 |
| Cow position: | chr5:60725610-60725870 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 195 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 63, 50 |
| Conread position: | 140-370 |
| Cow position: | chr5:20717473-20717693 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 65, 48 |
| Conread position: | 141-398 |
| Cow position: | chr5:20648910-20648657 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 82 |
| Conread position: | 141-399 |
| Cow position: | chr5:19299127-19298870 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 100 |
| Conread position: | 142-400 |
| Cow position: | chr5:39118513-39118751 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 144-398 |
| Cow position: | chr5:9585392-9585146 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 197 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 166, 45 |
| Conread position: | 145-399 |
| Cow position: | chr5:31551187-31551434 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 17 |
| Conread position: | 145-400 |
| Cow position: | chr5:33516429-33516166 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 121 |
| Conread position: | 146-363 |
| Cow position: | chr5:1286716-1286936 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 60, 92 |
| Conread position: | 149-399 |
| Cow position: | chr5:12581067-12581298 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 150-400 |
| Cow position: | chr5:29029698-29029950 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 173 |
| Conread position: | 151-398 |
| Cow position: | chr5:54157804-54158053 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 16, 164 |
| Conread position: | 156-398 |
| Cow position: | chr5:9232902-9232671 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 37, 7 |
| Conread position: | 158-387 |
| Cow position: | chr5:18379618-18379835 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 47, 76 |
| Conread position: | 160-363 |
| Cow position: | chr5:11404127-11403926 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 89 |
| Conread position: | 160-400 |
| Cow position: | chr5:56826411-56826650 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 47, 71 |
| Conread position: | 160-402 |
| Cow position: | chr5:53922182-53921937 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 42, 86 |
| Conread position: | 162-364 |
| Cow position: | chr5:70253033-70253238 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 44, 172 |
| Conread position: | 166-330 |
| Cow position: | chr5:12609977-12610139 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 8, 82 |
| Conread position: | 173-400 |
| Cow position: | chr5:50159610-50159825 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 32, 46 |
| Conread position: | 187-400 |
| Cow position: | chr5:37624468-37624682 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 170 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 19, 53 |
| Conread position: | 189-400 |
| Cow position: | chr5:12602294-12602499 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 172 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 192-400 |
| Cow position: | chr5:13156656-13156450 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 94, 62 |
| Conread position: | 192-400 |
| Cow position: | chr5:67579453-67579659 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 54 |
| Conread position: | 193-400 |
| Cow position: | chr5:49330270-49330482 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 17, 124 |
| Conread position: | 198-304 |
| Cow position: | chr5:33564603-33564702 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 199-370 |
| Cow position: | chr5:31944001-31944169 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 133, 21 |
| Conread position: | 201-400 |
| Cow position: | chr5:70532619-70532832 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 202-396 |
| Cow position: | chr5:38911566-38911771 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 202-398 |
| Cow position: | chr5:31641309-31641495 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 118, 39 |
| Conread position: | 204-398 |
| Cow position: | chr5:54761446-54761638 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 59, 43 |
| Conread position: | 206-399 |
| Cow position: | chr5:58384704-58384893 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 50, 30 |
| Conread position: | 217-398 |
| Cow position: | chr5:31461628-31461813 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 223-400 |
| Cow position: | chr5:65590671-65590501 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 226-398 |
| Cow position: | chr5:5830753-5830589 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 156, 8 |
| Conread position: | 240-400 |
| Cow position: | chr5:36156892-36157056 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 104, 19 |
| Conread position: | 243-400 |
| Cow position: | chr5:67001888-67002047 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 250-373 |
| Cow position: | chr5:37610730-37610853 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 109, 9 |
| Conread position: | 254-393 |
| Cow position: | chr5:50155803-50155669 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 10 |
| Conread position: | 254-400 |
| Cow position: | chr5:49238416-49238270 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-400 |
| Cow position: | chr5:62580439-62580585 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 258-400 |
| Cow position: | chr5:57629829-57629687 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 261-400 |
| Cow position: | chr5:16211302-16211157 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 266-398 |
| Cow position: | chr5:53599419-53599289 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 105, 57 |
| Conread position: | 266-400 |
| Cow position: | chr5:5194544-5194677 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 57 |
| Conread position: | 267-400 |
| Cow position: | chr5:62153790-62153662 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 47, 54 |
| Conread position: | 268-400 |
| Cow position: | chr5:8202658-8202794 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 275-400 |
| Cow position: | chr5:57930551-57930426 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 275-400 |
| Cow position: | chr5:59640055-59640180 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 278-400 |
| Cow position: | chr5:55856601-55856486 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 279-400 |
| Cow position: | chr5:62862815-62862694 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 286-402 |
| Cow position: | chr5:624779-624897 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 34, 87 |
| Conread position: | 288-400 |
| Cow position: | chr5:60472082-60471971 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 44, 76 |
| Conread position: | 310-400 |
| Cow position: | chr5:10785014-10784924 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 78 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.