Cow genome map


           Conread name:
           rcte04_l7.y1
        

               Conread position:
               1-373
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 13
               

               Conread position:
               1-396
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 13
               

               Conread position:
               1-398
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 36
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 18
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               291
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               105, 23
               

               Conread position:
               2-261
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               140, 18
               

               Conread position:
               5-402
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               59, 68
               

               Conread position:
               8-398
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 19
               

               Conread position:
               9-235
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               82, 11
               

               Conread position:
               9-397
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               268
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               128, 50
               

               Conread position:
               9-400
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 26
               

               Conread position:
               11-331
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 56
               

               Conread position:
               11-358
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               12, 26
               

               Conread position:
               11-364
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               124, 55
               

               Conread position:
               11-393
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               264
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               123, 59
               

               Conread position:
               11-398
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 59
               

               Conread position:
               11-400
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 65
               

               Conread position:
               11-400
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 51
               

               Conread position:
               13-393
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 53
               

               Conread position:
               13-400
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 25
               

               Conread position:
               13-402
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               365, 54
               

               Conread position:
               15-312
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               190, 124
               

               Conread position:
               16-400
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 49
               

               Conread position:
               38-400
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 31
               

               Conread position:
               60-392
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               87, 30
               

               Conread position:
               68-398
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               25, 166
               

               Conread position:
               69-400
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 137
               

               Conread position:
               70-330
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               70-394
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               16, 202
               

               Conread position:
               71-374
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 102
               

               Conread position:
               71-400
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               76-367
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               221
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               60, 97
               

               Conread position:
               79-381
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 133
               

               Conread position:
               79-400
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 164
               

               Conread position:
               80-350
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               54, 98
               

               Conread position:
               85-400
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 99
               

               Conread position:
               86-400
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 75
               

               Conread position:
               90-400
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               46, 118
               

               Conread position:
               96-331
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               40, 61
               

               Conread position:
               96-370
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               218
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               40, 23
               

               Conread position:
               96-402
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 151
               

               Conread position:
               102-366
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 145
               

               Conread position:
               114-400
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 48
               

               Conread position:
               121-339
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               15, 109
               

               Conread position:
               133-364
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               10, 88
               

               Conread position:
               134-398
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               9, 76
               

               Conread position:
               134-402
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 110
               

               Conread position:
               141-395
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               144-384
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 23
               

               Conread position:
               146-396
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               57, 26
               

               Conread position:
               147-400
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               61, 22
               

               Conread position:
               148-402
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 93
               

               Conread position:
               149-397
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               56, 97
               

               Conread position:
               153-400
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               163-394
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               164-400
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 188
               

               Conread position:
               165-398
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               94, 21
               

               Conread position:
               172-402
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 74
               

               Conread position:
               192-384
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               50, 18
               

               Conread position:
               192-397
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               13, 74
               

               Conread position:
               201-400
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               41, 146
               

               Conread position:
               202-400
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               9, 53
               

               Conread position:
               202-400
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               9, 53
               

               Conread position:
               202-400
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               202-400
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               207-400
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               212-400
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               46, 179
               

               Conread position:
               229-399
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               245-402
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               249-400
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               56, 15
               

               Conread position:
               254-400
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               257-400
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               26, 76
               

               Conread position:
               259-400
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               259-400
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               259-402
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               117, 72
               

               Conread position:
               263-401
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               264-397
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               264-400
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               264-400
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               32, 105
               

               Conread position:
               264-400
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               267-400
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               267-400
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               268-400
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               269-397
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               269-401
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               272-398
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               272-400
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               274-400
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               276-400
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               287-402
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               297-396
               

               Cow position:
               
               

               Alignm length:
               100
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.