Cow genome map
Conread name: | rcte04_l7.y1 |
Conread position: | 1-313 |
Cow position: | chr7:65953161-65952857 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 220 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 133, 19 |
Conread position: | 1-344 |
Cow position: | chr7:13823024-13823356 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 59 |
Conread position: | 1-370 |
Cow position: | chr7:5701159-5701520 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 19 |
Conread position: | 1-392 |
Cow position: | chr7:45064181-45063801 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 69 |
Conread position: | 1-397 |
Cow position: | chr7:62516249-62516629 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 39 |
Conread position: | 1-399 |
Cow position: | chr7:29377910-29377530 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 75 |
Conread position: | 1-400 |
Cow position: | chr7:61425793-61426199 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 7 |
Conread position: | 1-402 |
Cow position: | chr7:20104778-20104380 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 56 |
Conread position: | 2-371 |
Cow position: | chr7:42222184-42221826 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 67 |
Conread position: | 3-363 |
Cow position: | chr7:39512360-39512025 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 64 |
Conread position: | 3-400 |
Cow position: | chr7:67498939-67499318 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 279 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 164, 58 |
Conread position: | 9-342 |
Cow position: | chr7:64198633-64198315 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 224 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 12, 39 |
Conread position: | 9-400 |
Cow position: | chr7:45721972-45722342 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 27 |
Conread position: | 10-398 |
Cow position: | chr7:5247692-5247315 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 268 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 126, 51 |
Conread position: | 10-402 |
Cow position: | chr7:20289005-20288635 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 280 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 17, 51 |
Conread position: | 11-344 |
Cow position: | chr7:63328335-63328662 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 233 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 106, 214 |
Conread position: | 11-397 |
Cow position: | chr7:62048662-62049033 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 43 |
Conread position: | 11-398 |
Cow position: | chr7:45099475-45099855 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 55 |
Conread position: | 11-401 |
Cow position: | chr7:52532880-52532495 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 267 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 10, 61 |
Conread position: | 12-400 |
Cow position: | chr7:52131369-52131753 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 270 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 22, 57 |
Conread position: | 13-399 |
Cow position: | chr7:59844705-59845077 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 59 |
Conread position: | 14-258 |
Cow position: | chr7:59164149-59164388 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 177 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 120, 46 |
Conread position: | 15-400 |
Cow position: | chr7:11592962-11592607 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 11 |
Conread position: | 16-242 |
Cow position: | chr7:5448052-5447829 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 162 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 118, 53 |
Conread position: | 16-255 |
Cow position: | chr7:5435634-5435399 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 170 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 118, 53 |
Conread position: | 17-400 |
Cow position: | chr7:68246563-68246930 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 254 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 119, 43 |
Conread position: | 69-400 |
Cow position: | chr7:48335190-48334878 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 75 |
Conread position: | 72-400 |
Cow position: | chr7:43004670-43005010 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 29 |
Conread position: | 77-318 |
Cow position: | chr7:43231053-43231288 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 173 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 59, 93 |
Conread position: | 78-400 |
Cow position: | chr7:12920337-12920024 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 235 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 95, 32 |
Conread position: | 89-291 |
Cow position: | chr7:31442037-31441831 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 158 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 47, 203 |
Conread position: | 89-400 |
Cow position: | chr7:46216364-46216673 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 56 |
Conread position: | 90-241 |
Cow position: | chr7:1666791-1666947 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 114 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 90-244 |
Cow position: | chr7:26479183-26479028 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 120 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 44, 96 |
Conread position: | 90-398 |
Cow position: | chr7:56664380-56664675 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 134 |
Conread position: | 95-398 |
Cow position: | chr7:42555346-42555631 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 213 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 109, 37 |
Conread position: | 104-401 |
Cow position: | chr7:15859646-15859351 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 203 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 101, 34 |
Conread position: | 115-400 |
Cow position: | chr7:185239-185508 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 203 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 12, 59 |
Conread position: | 122-400 |
Cow position: | chr7:59204617-59204909 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 125-400 |
Cow position: | chr7:56356720-56356449 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 195 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 68, 33 |
Conread position: | 133-399 |
Cow position: | chr7:65519778-65519489 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 219 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 31, 12 |
Conread position: | 133-400 |
Cow position: | chr7:68366891-68366616 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 205 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 14, 133 |
Conread position: | 141-400 |
Cow position: | chr7:40622551-40622801 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 198 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 63, 97 |
Conread position: | 142-399 |
Cow position: | chr7:40023078-40023308 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 186 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 142-400 |
Cow position: | chr7:24883642-24883389 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 191 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 24, 108 |
Conread position: | 146-364 |
Cow position: | chr7:30027509-30027731 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 172 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 14, 134 |
Conread position: | 146-400 |
Cow position: | chr7:16738809-16739050 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 174 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 58, 95 |
Conread position: | 173-390 |
Cow position: | chr7:14435425-14435213 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 155 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 18, 45 |
Conread position: | 182-402 |
Cow position: | chr7:63547368-63547167 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 167 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 183-402 |
Cow position: | chr7:54060433-54060204 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 170 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 184-400 |
Cow position: | chr7:32589217-32589437 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 161 |
Conread position: | 185-402 |
Cow position: | chr7:28010275-28010063 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 165 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 122, 26 |
Conread position: | 192-400 |
Cow position: | chr7:43257617-43257818 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 173 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 15 |
Conread position: | 204-371 |
Cow position: | chr7:64367125-64367293 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 136 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 49, 33 |
Conread position: | 223-400 |
Cow position: | chr7:23612544-23612362 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 131 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 17, 141 |
Conread position: | 238-400 |
Cow position: | chr7:8893584-8893421 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 138 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 239-400 |
Cow position: | chr7:40643459-40643622 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 120 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 244-383 |
Cow position: | chr7:40615971-40616099 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 112 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 248-398 |
Cow position: | chr7:52573304-52573156 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 112 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 248-400 |
Cow position: | chr7:59164785-59164931 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 119 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 12, 60 |
Conread position: | 249-399 |
Cow position: | chr7:48413600-48413448 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 117 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 259-400 |
Cow position: | chr7:27765742-27765875 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 111 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 262-386 |
Cow position: | chr7:33339609-33339730 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 102 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 264-397 |
Cow position: | chr7:53356219-53356089 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 106 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 268-393 |
Cow position: | chr7:7763229-7763353 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 99 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 272-400 |
Cow position: | chr7:58872323-58872193 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 105 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 20, 78 |
Conread position: | 273-400 |
Cow position: | chr7:31441620-31441497 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 105 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 277-401 |
Cow position: | chr7:49666522-49666646 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 102 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 279-402 |
Cow position: | chr7:50034603-50034483 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 97 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 281-401 |
Cow position: | chr7:22647780-22647658 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 282-398 |
Cow position: | chr7:11188807-11188921 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 94 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 289-402 |
Cow position: | chr7:38526562-38526672 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 91 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 303-400 |
Cow position: | chr7:37259659-37259561 (view UCSC Genome Browser custom track) |
Alignm length: | 99 |
Alignm identity: | 86 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 9, 0 |
Show alignments to all cow chromosomes.