Cow genome map


           Conread name:
           rcte04_l7.y1
        

               Conread position:
               1-313
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               133, 19
               

               Conread position:
               1-344
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 59
               

               Conread position:
               1-370
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 19
               

               Conread position:
               1-392
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 69
               

               Conread position:
               1-397
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 39
               

               Conread position:
               1-399
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 75
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               1-402
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 56
               

               Conread position:
               2-371
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 67
               

               Conread position:
               3-363
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 64
               

               Conread position:
               3-400
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               279
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               164, 58
               

               Conread position:
               9-342
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               12, 39
               

               Conread position:
               9-400
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 27
               

               Conread position:
               10-398
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               268
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               126, 51
               

               Conread position:
               10-402
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               280
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               17, 51
               

               Conread position:
               11-344
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               106, 214
               

               Conread position:
               11-397
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 43
               

               Conread position:
               11-398
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 55
               

               Conread position:
               11-401
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               267
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               10, 61
               

               Conread position:
               12-400
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               270
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               22, 57
               

               Conread position:
               13-399
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 59
               

               Conread position:
               14-258
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               120, 46
               

               Conread position:
               15-400
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 11
               

               Conread position:
               16-242
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 53
               

               Conread position:
               16-255
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               118, 53
               

               Conread position:
               17-400
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               119, 43
               

               Conread position:
               69-400
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 75
               

               Conread position:
               72-400
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 29
               

               Conread position:
               77-318
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               59, 93
               

               Conread position:
               78-400
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               95, 32
               

               Conread position:
               89-291
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               47, 203
               

               Conread position:
               89-400
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 56
               

               Conread position:
               90-241
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               90-244
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               44, 96
               

               Conread position:
               90-398
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               95-398
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               109, 37
               

               Conread position:
               104-401
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               101, 34
               

               Conread position:
               115-400
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               12, 59
               

               Conread position:
               122-400
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               125-400
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               68, 33
               

               Conread position:
               133-399
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               31, 12
               

               Conread position:
               133-400
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               14, 133
               

               Conread position:
               141-400
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               63, 97
               

               Conread position:
               142-399
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               142-400
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               24, 108
               

               Conread position:
               146-364
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               14, 134
               

               Conread position:
               146-400
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               58, 95
               

               Conread position:
               173-390
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               18, 45
               

               Conread position:
               182-402
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               183-402
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               184-400
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 161
               

               Conread position:
               185-402
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               122, 26
               

               Conread position:
               192-400
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 15
               

               Conread position:
               204-371
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               49, 33
               

               Conread position:
               223-400
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               17, 141
               

               Conread position:
               238-400
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               138
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               239-400
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               244-383
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               248-398
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               248-400
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               12, 60
               

               Conread position:
               249-399
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               259-400
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               262-386
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               264-397
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               268-393
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               272-400
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               20, 78
               

               Conread position:
               273-400
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               277-401
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               279-402
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               281-401
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               282-398
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               289-402
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               303-400
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 0
               
Show alignments to all cow chromosomes.