Cow genome map


           Conread name:
           rcte04_l7.y1
        

               Conread position:
               1-331
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 75
               

               Conread position:
               1-373
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 61
               

               Conread position:
               1-384
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 55
               

               Conread position:
               1-387
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 19
               

               Conread position:
               1-398
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 72
               

               Conread position:
               1-398
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 28
               

               Conread position:
               1-398
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 19
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 58
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 57
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               310
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               82, 19
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 28
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 33
               

               Conread position:
               5-246
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               131, 10
               

               Conread position:
               8-244
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               198, 76
               

               Conread position:
               9-267
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               14, 56
               

               Conread position:
               9-331
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               13, 55
               

               Conread position:
               9-394
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               11, 62
               

               Conread position:
               10-367
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               194, 45
               

               Conread position:
               10-398
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               124, 60
               

               Conread position:
               11-238
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               119, 50
               

               Conread position:
               11-315
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               219
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               125, 65
               

               Conread position:
               11-363
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 49
               

               Conread position:
               11-370
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 53
               

               Conread position:
               13-326
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               186, 22
               

               Conread position:
               15-196
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               119, 46
               

               Conread position:
               15-351
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               241
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               15-398
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 50
               

               Conread position:
               20-385
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 42
               

               Conread position:
               20-396
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               259
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               34, 57
               

               Conread position:
               20-398
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 46
               

               Conread position:
               23-255
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 11
               

               Conread position:
               25-400
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               36, 64
               

               Conread position:
               25-401
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 51
               

               Conread position:
               69-400
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 156
               

               Conread position:
               71-402
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 159
               

               Conread position:
               73-262
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               64, 36
               

               Conread position:
               75-398
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               61, 38
               

               Conread position:
               76-386
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 149
               

               Conread position:
               78-402
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 164
               

               Conread position:
               79-402
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 38
               

               Conread position:
               90-393
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               224
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               46, 28
               

               Conread position:
               90-400
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 81
               

               Conread position:
               90-400
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 28
               

               Conread position:
               90-400
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               51, 87
               

               Conread position:
               94-400
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               42, 7
               

               Conread position:
               95-402
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 47
               

               Conread position:
               102-402
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 11
               

               Conread position:
               106-398
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               107-400
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 80
               

               Conread position:
               122-398
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 195
               

               Conread position:
               134-401
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               9, 116
               

               Conread position:
               134-402
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               203
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               72, 6
               

               Conread position:
               144-400
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               31, 21
               

               Conread position:
               146-400
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               59, 23
               

               Conread position:
               163-400
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               42, 77
               

               Conread position:
               163-400
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               42, 77
               

               Conread position:
               166-400
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               39, 78
               

               Conread position:
               175-364
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               95, 30
               

               Conread position:
               175-400
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               35, 46
               

               Conread position:
               177-400
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               192-398
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               13, 49
               

               Conread position:
               193-364
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               16, 96
               

               Conread position:
               193-398
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               166
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               201-400
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               202-399
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               161, 21
               

               Conread position:
               203-400
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               57, 113
               

               Conread position:
               206-375
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               215-399
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               247-398
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               29, 38
               

               Conread position:
               259-400
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               259-400
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               266-400
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               269-402
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               271-400
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               277-400
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               19, 102
               

               Conread position:
               304-400
               

               Cow position:
               
               

               Alignm length:
               97
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.