Cow genome map


           Conread name:
           rcte04_l7.y1
        

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 172
               

               Conread position:
               1-325
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 67
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 58
               

               Conread position:
               1-394
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 37
               

               Conread position:
               1-399
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 19
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 23
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 49
               

               Conread position:
               2-370
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 62
               

               Conread position:
               2-400
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 142
               

               Conread position:
               3-400
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 30
               

               Conread position:
               7-333
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               16, 186
               

               Conread position:
               7-397
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 61
               

               Conread position:
               8-400
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               273
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               34, 58
               

               Conread position:
               9-398
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               9-402
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               196, 10
               

               Conread position:
               10-298
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               73, 25
               

               Conread position:
               10-398
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               271
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               118, 17
               

               Conread position:
               11-220
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               10, 71
               

               Conread position:
               11-282
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               130, 51
               

               Conread position:
               11-392
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 57
               

               Conread position:
               11-400
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 56
               

               Conread position:
               11-400
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               287
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               193, 59
               

               Conread position:
               11-402
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 59
               

               Conread position:
               12-400
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               12-400
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               193, 16
               

               Conread position:
               15-400
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               273
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               7, 57
               

               Conread position:
               15-400
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 46
               

               Conread position:
               28-400
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 33
               

               Conread position:
               67-402
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 46
               

               Conread position:
               69-393
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               219
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               65, 15
               

               Conread position:
               69-402
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               252
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               73, 241
               

               Conread position:
               70-393
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 44
               

               Conread position:
               70-398
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 139
               

               Conread position:
               72-272
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               9, 172
               

               Conread position:
               76-240
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               78-324
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               47, 7
               

               Conread position:
               90-241
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               92-384
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               219
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               43, 27
               

               Conread position:
               92-397
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               44, 68
               

               Conread position:
               96-398
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               38, 156
               

               Conread position:
               96-400
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 70
               

               Conread position:
               102-399
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               35, 12
               

               Conread position:
               102-400
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               92, 30
               

               Conread position:
               103-400
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 144
               

               Conread position:
               106-318
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               68, 30
               

               Conread position:
               115-359
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 214
               

               Conread position:
               134-398
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               5, 182
               

               Conread position:
               142-317
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               113, 58
               

               Conread position:
               142-392
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 104
               

               Conread position:
               142-402
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               146-402
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 38
               

               Conread position:
               149-399
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               192
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               200, 37
               

               Conread position:
               149-400
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               35, 64
               

               Conread position:
               155-400
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               169-398
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               36, 77
               

               Conread position:
               174-399
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 66
               

               Conread position:
               182-400
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               186, 141
               

               Conread position:
               183-400
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               186-379
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               19, 93
               

               Conread position:
               186-400
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               5, 33
               

               Conread position:
               188-398
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               189-400
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               168
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               19, 32
               

               Conread position:
               196-394
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               41, 48
               

               Conread position:
               200-400
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               201-400
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               205-342
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               209-370
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               47, 34
               

               Conread position:
               222-397
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               225-393
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               225-402
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               248-388
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               97, 125
               

               Conread position:
               251-400
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               256-396
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               16, 127
               

               Conread position:
               258-400
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               259-400
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               116, 5
               

               Conread position:
               261-402
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               104, 14
               

               Conread position:
               263-400
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               18, 47
               

               Conread position:
               265-400
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               275-400
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-400
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.