Cow genome map


           Conread name:
           rcte05_i19.y1
        

               Conread position:
               239-438
               

               Cow position:
               chr16:9749509-9749700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 79
               

               Conread position:
               241-436
               

               Cow position:
               chr16:9521769-9521964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               7, 129
               

               Conread position:
               241-438
               

               Cow position:
               chr16:34136256-34136458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               10, 93
               

               Conread position:
               250-436
               

               Cow position:
               chr16:33693753-33693934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               59, 122
               

               Conread position:
               250-438
               

               Cow position:
               chr16:48940538-48940727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               255-435
               

               Cow position:
               chr16:31533059-31533239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               66, 49
               

               Conread position:
               273-436
               

               Cow position:
               chr16:6532078-6531916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               289-435
               

               Cow position:
               chr16:378026-378168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               300-435
               

               Cow position:
               chr16:10143493-10143624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               330-436
               

               Cow position:
               chr16:4442853-4442959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               86
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.