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Cow genome map

           
Conread name:
           
rcte16_d7.y1
        

               
Conread position:
               
1-197
               

               
Cow position:
               
chr20:15822028-15822228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
143, 21
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr20:13267727-13267505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr20:7710501-7710282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
54, 116
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr20:35922165-35921939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 42
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr20:14756361-14756136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr20:4893207-4892961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr20:23849998-23850226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
52, 28
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr20:3658988-3658744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
107, 59
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr20:3781725-3781452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr20:5104728-5104466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
54, 112
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr20:12334089-12334349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr20:17734063-17733800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
144, 46
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr20:18399467-18399738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
58, 105
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr20:27339769-27340037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 109
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr20:33170165-33169898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
141, 59
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr20:3891756-3892024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
128, 59
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr20:24391706-24392001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
114, 41
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr20:13955751-13956099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
24, 35
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr20:14831915-14831559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 318
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr20:4895189-4894838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
54, 309
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr20:24002035-24002375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
52, 57
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr20:18185285-18185635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 155
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr20:30817242-30817609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
72, 56
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr20:4621634-4621271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
52, 45
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr20:7549964-7550313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
120, 55
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr20:12155397-12155046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
30, 121
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr20:9536843-9537216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 69
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr20:39377433-39377080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
59, 33
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr20:17475065-17474686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
54, 141
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr20:5998968-5998568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 189
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr20:11453648-11453254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
54, 102
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr20:6501505-6501900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 203
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr20:10913628-10913236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
54, 126
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr20:16715110-16715499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
142, 29
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr20:19236797-19237182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
58, 43
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr20:22313454-22313053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 285
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr20:868846-868456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr20:20202922-20203330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
54, 307
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr20:8577953-8578366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 43
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr20:19459936-19459548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
77, 29
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr20:23792310-23792721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr20:31740506-31740102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
132, 59
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr20:22920454-22920050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
54, 327
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr20:24398926-24398522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
54, 267
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr20:35797313-35797733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr20:13821876-13821452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 115
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr20:5576466-5576916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 113
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr20:6258357-6257913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 111
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr20:25162404-25161972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 143
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr20:6096779-6096340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 189
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr20:581222-580764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
54, 113
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr20:4756116-4755679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
144, 45
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr20:13269335-13269772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
54, 15
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr20:14806591-14807043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
77, 270
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr20:18530152-18530592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 238
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr20:23833843-23834271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
142, 21
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr20:32667696-32668127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr20:23164166-23163746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 216
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr20:26076794-26077240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 59
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr20:9412202-9412647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
54, 115
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr20:20983731-20984151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
143, 45
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr20:22959637-22959189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr20:23871109-23870660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 105
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr20:33144847-33144394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
59, 87
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr20:33532016-33532462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
34, 44
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr20:39398186-39398640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
59, 114
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr20:40781683-40782120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
101, 40
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr20:7756921-7756467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
54, 71
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr20:18490899-18491319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
54, 74
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr20:32847058-32847504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 249
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr20:36780024-36779569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr20:18321088-18320632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 57
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr20:40423384-40422932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 266
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr20:34836156-34835939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
132, 56
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr20:32548676-32548892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
52, 106
               

               
Conread position:
               
3-431
               

               
Cow position:
               
chr20:11550074-11550523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
52, 373
               

               
Conread position:
               
3-434
               

               
Cow position:
               
chr20:24069523-24069965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 90
               

               
Conread position:
               
4-224
               

               
Cow position:
               
chr20:10062007-10061784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 68
               

               
Conread position:
               
4-250
               

               
Cow position:
               
chr20:16291188-16291441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
104, 59
               

               
Conread position:
               
4-256
               

               
Cow position:
               
chr20:22445928-22445663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
28, 105
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr20:12048117-12048404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
51, 123
               

               
Conread position:
               
4-377
               

               
Cow position:
               
chr20:13817560-13817926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
4-384
               

               
Cow position:
               
chr20:34001683-34001282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
139, 38
               

               
Conread position:
               
4-434
               

               
Cow position:
               
chr20:12582238-12581796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 12
               

               
Conread position:
               
4-440
               

               
Cow position:
               
chr20:9433311-9433753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 99
               

               
Conread position:
               
5-384
               

               
Cow position:
               
chr20:6549758-6549372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 68
               

               
Conread position:
               
5-430
               

               
Cow position:
               
chr20:6240819-6240365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
5-431
               

               
Cow position:
               
chr20:7110408-7109965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 103
               

               
Conread position:
               
5-433
               

               
Cow position:
               
chr20:17251421-17251876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 98
               

               
Conread position:
               
5-433
               

               
Cow position:
               
chr20:39728161-39728610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 67
               

               
Conread position:
               
5-441
               

               
Cow position:
               
chr20:6054795-6054342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 43
               

               
Conread position:
               
6-278
               

               
Cow position:
               
chr20:10468785-10469070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
134, 54
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr20:6571043-6571429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 384
               

               
Conread position:
               
6-431
               

               
Cow position:
               
chr20:10818517-10818084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
14, 53
               

               
Conread position:
               
8-433
               

               
Cow position:
               
chr20:25009927-25009473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
135, 52
               

               
Conread position:
               
9-220
               

               
Cow position:
               
chr20:12839772-12839995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
9-431
               

               
Cow position:
               
chr20:13751960-13752381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
46, 62
               

               
Conread position:
               
10-431
               

               
Cow position:
               
chr20:9707174-9706762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
133, 20
               

               
Conread position:
               
11-437
               

               
Cow position:
               
chr20:39418174-39417742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
44, 19
               

               
Conread position:
               
12-216
               

               
Cow position:
               
chr20:31147813-31148018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
12-428
               

               
Cow position:
               
chr20:26881204-26880745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
49, 323
               

               
Conread position:
               
13-337
               

               
Cow position:
               
chr20:31069360-31069699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
48, 132
               

               
Conread position:
               
13-388
               

               
Cow position:
               
chr20:21019283-21019678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 321
               

               
Conread position:
               
13-396
               

               
Cow position:
               
chr20:2819281-2819663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
154, 49
               

               
Conread position:
               
13-406
               

               
Cow position:
               
chr20:38123603-38124016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 95
               

               
Conread position:
               
13-433
               

               
Cow position:
               
chr20:3599674-3599239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 282
               

               
Conread position:
               
15-217
               

               
Cow position:
               
chr20:11765885-11765676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 106
               

               
Conread position:
               
20-384
               

               
Cow position:
               
chr20:21714477-21714868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
22-211
               

               
Cow position:
               
chr20:20201719-20201912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 117
               

               
Conread position:
               
24-383
               

               
Cow position:
               
chr20:35958378-35958754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
37, 76
               

               
Conread position:
               
29-383
               

               
Cow position:
               
chr20:7659475-7659107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 65
               

               
Conread position:
               
30-384
               

               
Cow position:
               
chr20:8703174-8702810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
25, 79
               

               
Conread position:
               
31-350
               

               
Cow position:
               
chr20:10034194-10033846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
32-366
               

               
Cow position:
               
chr20:13967522-13967167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
21, 143
               

               
Conread position:
               
35-432
               

               
Cow position:
               
chr20:5950889-5950485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
37-307
               

               
Cow position:
               
chr20:6045656-6045398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
44-388
               

               
Cow position:
               
chr20:3607202-3606849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 58
               

               
Conread position:
               
51-444
               

               
Cow position:
               
chr20:15549141-15548727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
19, 193
               

               
Conread position:
               
53-342
               

               
Cow position:
               
chr20:24521510-24521814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
90, 242
               

               
Conread position:
               
53-393
               

               
Cow position:
               
chr20:22235071-22235429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
27, 249
               

               
Conread position:
               
56-433
               

               
Cow position:
               
chr20:39517774-39518165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
57-430
               

               
Cow position:
               
chr20:10200104-10200502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
51, 372
               

               
Conread position:
               
57-431
               

               
Cow position:
               
chr20:6903092-6903471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
89, 48
               

               
Conread position:
               
57-443
               

               
Cow position:
               
chr20:10208568-10208977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
88, 6
               

               
Conread position:
               
58-334
               

               
Cow position:
               
chr20:20312973-20312690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
169, 236
               

               
Conread position:
               
61-430
               

               
Cow position:
               
chr20:35843345-35842970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
84, 175
               

               
Conread position:
               
64-227
               

               
Cow position:
               
chr20:22850931-22851096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
6, 123
               

               
Conread position:
               
64-431
               

               
Cow position:
               
chr20:20360001-20359625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
81, 33
               

               
Conread position:
               
64-437
               

               
Cow position:
               
chr20:8556501-8556106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
6, 30
               

               
Conread position:
               
71-298
               

               
Cow position:
               
chr20:8910701-8910941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 226
               

               
Conread position:
               
71-350
               

               
Cow position:
               
chr20:11923464-11923173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 231
               

               
Conread position:
               
71-393
               

               
Cow position:
               
chr20:4205740-4206089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
71-414
               

               
Cow position:
               
chr20:20471567-20471923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 156
               

               
Conread position:
               
71-431
               

               
Cow position:
               
chr20:10759688-10759315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
71-431
               

               
Cow position:
               
chr20:25823061-25823433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
43, 214
               

               
Conread position:
               
71-431
               

               
Cow position:
               
chr20:39405545-39405917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
90, 69
               

               
Conread position:
               
71-434
               

               
Cow position:
               
chr20:26996311-26996689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
71, 34
               

               
Conread position:
               
72-349
               

               
Cow position:
               
chr20:20557876-20557576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 236
               

               
Conread position:
               
72-372
               

               
Cow position:
               
chr20:22704066-22704390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
72-384
               

               
Cow position:
               
chr20:35009962-35009630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
72-430
               

               
Cow position:
               
chr20:14679396-14679773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 58
               

               
Conread position:
               
72-430
               

               
Cow position:
               
chr20:17669960-17670339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 240
               

               
Conread position:
               
72-431
               

               
Cow position:
               
chr20:220396-220765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
64, 37
               

               
Conread position:
               
72-437
               

               
Cow position:
               
chr20:13652566-13652204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
161, 23
               

               
Conread position:
               
73-355
               

               
Cow position:
               
chr20:30777955-30778247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
72, 137
               

               
Conread position:
               
73-433
               

               
Cow position:
               
chr20:5826716-5827099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
69, 238
               

               
Conread position:
               
73-438
               

               
Cow position:
               
chr20:11741524-11741140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
74-389
               

               
Cow position:
               
chr20:32578140-32577810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
34, 301
               

               
Conread position:
               
74-404
               

               
Cow position:
               
chr20:7803367-7803036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
77-431
               

               
Cow position:
               
chr20:13023695-13023346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
67, 150
               

               
Conread position:
               
78-298
               

               
Cow position:
               
chr20:18618423-18618658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 27
               

               
Conread position:
               
78-331
               

               
Cow position:
               
chr20:29633207-29632945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
88, 226
               

               
Conread position:
               
78-354
               

               
Cow position:
               
chr20:11975323-11975049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 139
               

               
Conread position:
               
78-380
               

               
Cow position:
               
chr20:40256754-40257073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
78-393
               

               
Cow position:
               
chr20:31564185-31563857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 252
               

               
Conread position:
               
78-393
               

               
Cow position:
               
chr20:35897302-35897638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
78-400
               

               
Cow position:
               
chr20:7442340-7442012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 148
               

               
Conread position:
               
78-421
               

               
Cow position:
               
chr20:14759880-14759518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
64, 131
               

               
Conread position:
               
78-430
               

               
Cow position:
               
chr20:34776970-34777336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 228
               

               
Conread position:
               
78-431
               

               
Cow position:
               
chr20:10838435-10838055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 24
               

               
Conread position:
               
78-432
               

               
Cow position:
               
chr20:38768669-38768305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
64, 105
               

               
Conread position:
               
78-437
               

               
Cow position:
               
chr20:13465302-13465669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
81, 74
               

               
Conread position:
               
78-445
               

               
Cow position:
               
chr20:14735461-14735833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
80-256
               

               
Cow position:
               
chr20:9379195-9379384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
80-388
               

               
Cow position:
               
chr20:11482353-11482022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
56, 233
               

               
Conread position:
               
80-412
               

               
Cow position:
               
chr20:19265943-19266291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
63, 129
               

               
Conread position:
               
80-430
               

               
Cow position:
               
chr20:42459065-42458700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
80-433
               

               
Cow position:
               
chr20:14879572-14879948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
28, 354
               

               
Conread position:
               
81-431
               

               
Cow position:
               
chr20:4204079-4204442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
60, 230
               

               
Conread position:
               
81-431
               

               
Cow position:
               
chr20:7182889-7182530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
64, 219
               

               
Conread position:
               
82-431
               

               
Cow position:
               
chr20:32862204-32861846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
56, 301
               

               
Conread position:
               
83-389
               

               
Cow position:
               
chr20:7600988-7600668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
58, 22
               

               
Conread position:
               
84-384
               

               
Cow position:
               
chr20:34251888-34251565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
84-387
               

               
Cow position:
               
chr20:19238641-19238316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 21
               

               
Conread position:
               
86-316
               

               
Cow position:
               
chr20:12041355-12041107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
86-404
               

               
Cow position:
               
chr20:14572564-14572235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
56, 110
               

               
Conread position:
               
89-344
               

               
Cow position:
               
chr20:15593091-15593365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
54, 217
               

               
Conread position:
               
89-384
               

               
Cow position:
               
chr20:39325180-39325498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 219
               

               
Conread position:
               
89-417
               

               
Cow position:
               
chr20:3426952-3427273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
20, 143
               

               
Conread position:
               
90-373
               

               
Cow position:
               
chr20:24869232-24868936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
48, 141
               

               
Conread position:
               
91-429
               

               
Cow position:
               
chr20:15566034-15565674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 306
               

               
Conread position:
               
91-430
               

               
Cow position:
               
chr20:33178729-33178362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 177
               

               
Conread position:
               
93-421
               

               
Cow position:
               
chr20:15074033-15073690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
50, 216
               

               
Conread position:
               
97-378
               

               
Cow position:
               
chr20:2802276-2801993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
98-433
               

               
Cow position:
               
chr20:34098154-34097794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 206
               

               
Conread position:
               
102-393
               

               
Cow position:
               
chr20:11542475-11542171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 167
               

               
Conread position:
               
102-433
               

               
Cow position:
               
chr20:28067618-28067265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 277
               

               
Conread position:
               
108-393
               

               
Cow position:
               
chr20:37165540-37165827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
35, 141
               

               
Conread position:
               
114-382
               

               
Cow position:
               
chr20:42197158-42197418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 164
               

               
Conread position:
               
123-433
               

               
Cow position:
               
chr20:14540189-14540502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
41, 168
               

               
Conread position:
               
139-429
               

               
Cow position:
               
chr20:6890570-6890863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
76, 152
               

               
Conread position:
               
140-431
               

               
Cow position:
               
chr20:38858553-38858276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
141-386
               

               
Cow position:
               
chr20:25293449-25293705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 178
               

               
Conread position:
               
141-430
               

               
Cow position:
               
chr20:27001252-27001542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
143-336
               

               
Cow position:
               
chr20:32068995-32068792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 148
               

               
Conread position:
               
143-350
               

               
Cow position:
               
chr20:20241957-20242166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
17, 81
               

               
Conread position:
               
143-443
               

               
Cow position:
               
chr20:6602898-6603210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
144-343
               

               
Cow position:
               
chr20:28831827-28832037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
75, 155
               

               
Conread position:
               
144-381
               

               
Cow position:
               
chr20:7210899-7211144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
85, 159
               

               
Conread position:
               
144-384
               

               
Cow position:
               
chr20:27408015-27407779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
85, 115
               

               
Conread position:
               
144-429
               

               
Cow position:
               
chr20:9267238-9266952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
109, 36
               

               
Conread position:
               
144-433
               

               
Cow position:
               
chr20:15569087-15568790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 153
               

               
Conread position:
               
144-435
               

               
Cow position:
               
chr20:34107973-34108266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 55
               

               
Conread position:
               
149-382
               

               
Cow position:
               
chr20:34597236-34596992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
150-256
               

               
Cow position:
               
chr20:9701712-9701602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
150-383
               

               
Cow position:
               
chr20:14433564-14433315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
150-384
               

               
Cow position:
               
chr20:32674329-32674558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
65, 82
               

               
Conread position:
               
150-424
               

               
Cow position:
               
chr20:22484724-22485009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 145
               

               
Conread position:
               
150-435
               

               
Cow position:
               
chr20:7438987-7438690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 49
               

               
Conread position:
               
151-384
               

               
Cow position:
               
chr20:3141448-3141681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
151-432
               

               
Cow position:
               
chr20:24234025-24234303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 101
               

               
Conread position:
               
152-384
               

               
Cow position:
               
chr20:4332004-4332237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
9, 50
               

               
Conread position:
               
152-421
               

               
Cow position:
               
chr20:21928770-21929052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
8, 138
               

               
Conread position:
               
152-430
               

               
Cow position:
               
chr20:25274409-25274137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
8, 51
               

               
Conread position:
               
153-384
               

               
Cow position:
               
chr20:34221348-34221586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
66, 140
               

               
Conread position:
               
153-394
               

               
Cow position:
               
chr20:7539355-7539105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 161
               

               
Conread position:
               
153-430
               

               
Cow position:
               
chr20:8261779-8262072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
153-431
               

               
Cow position:
               
chr20:25686480-25686191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
73, 57
               

               
Conread position:
               
153-431
               

               
Cow position:
               
chr20:41089922-41089639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 131
               

               
Conread position:
               
153-433
               

               
Cow position:
               
chr20:14980643-14980347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
67, 278
               

               
Conread position:
               
153-433
               

               
Cow position:
               
chr20:34178605-34178319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
63, 24
               

               
Conread position:
               
153-435
               

               
Cow position:
               
chr20:5636352-5636642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
74, 191
               

               
Conread position:
               
158-384
               

               
Cow position:
               
chr20:2169831-2169616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 72
               

               
Conread position:
               
159-431
               

               
Cow position:
               
chr20:31080919-31081195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
58, 16
               

               
Conread position:
               
161-385
               

               
Cow position:
               
chr20:12430918-12430691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
70, 28
               

               
Conread position:
               
161-400
               

               
Cow position:
               
chr20:14100558-14100311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
50, 6
               

               
Conread position:
               
165-393
               

               
Cow position:
               
chr20:26084099-26083865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
63, 79
               

               
Conread position:
               
165-435
               

               
Cow position:
               
chr20:7362849-7363121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
64, 118
               

               
Conread position:
               
165-438
               

               
Cow position:
               
chr20:24833974-24834253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
66, 117
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr20:24727251-24727449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 119
               

               
Conread position:
               
166-388
               

               
Cow position:
               
chr20:13658961-13658731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
62, 149
               

               
Conread position:
               
166-430
               

               
Cow position:
               
chr20:30648326-30648045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
50, 140
               

               
Conread position:
               
166-432
               

               
Cow position:
               
chr20:1575980-1576255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
68, 114
               

               
Conread position:
               
167-430
               

               
Cow position:
               
chr20:23234917-23235186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
50, 136
               

               
Conread position:
               
167-437
               

               
Cow position:
               
chr20:16941394-16941125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 16
               

               
Conread position:
               
170-442
               

               
Cow position:
               
chr20:13025725-13025442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
45, 123
               

               
Conread position:
               
172-431
               

               
Cow position:
               
chr20:19339986-19339724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 127
               

               
Conread position:
               
173-405
               

               
Cow position:
               
chr20:29404288-29404043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
56, 122
               

               
Conread position:
               
188-372
               

               
Cow position:
               
chr20:21698290-21698489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
33, 116
               

               
Conread position:
               
188-380
               

               
Cow position:
               
chr20:23103123-23103326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 113
               

               
Conread position:
               
190-349
               

               
Cow position:
               
chr20:26315685-26315523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
190-424
               

               
Cow position:
               
chr20:12676349-12676579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
25, 84
               

               
Conread position:
               
195-418
               

               
Cow position:
               
chr20:23506550-23506326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 15
               

               
Conread position:
               
196-427
               

               
Cow position:
               
chr20:37028733-37028976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
62, 31
               

               
Conread position:
               
213-430
               

               
Cow position:
               
chr20:7100708-7100941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
215-430
               

               
Cow position:
               
chr20:17397323-17397108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 77
               

               
Conread position:
               
218-431
               

               
Cow position:
               
chr20:5763348-5763137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
67, 22
               

               
Conread position:
               
244-429
               

               
Cow position:
               
chr20:30855783-30855604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
156, 43
               

               
Conread position:
               
244-430
               

               
Cow position:
               
chr20:42254830-42255016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
156, 65
               

               
Conread position:
               
244-431
               

               
Cow position:
               
chr20:19865224-19865404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
155, 42
               

               
Conread position:
               
245-430
               

               
Cow position:
               
chr20:14363166-14362992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
164, 61
               

               
Conread position:
               
247-431
               

               
Cow position:
               
chr20:39220745-39220560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
25, 5
               

               
Conread position:
               
251-431
               

               
Cow position:
               
chr20:39656227-39656399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
254-432
               

               
Cow position:
               
chr20:26750226-26750057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
146, 31
               

               
Conread position:
               
270-424
               

               
Cow position:
               
chr20:614720-614877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
280-430
               

               
Cow position:
               
chr20:4934064-4933914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
292-432
               

               
Cow position:
               
chr20:16979764-16979907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
315-431
               

               
Cow position:
               
chr20:37450588-37450706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               
Show alignments to all cow chromosomes.