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Cow genome map

           
Conread name:
           
rcte16_d7.y1
        

               
Conread position:
               
1-208
               

               
Cow position:
               
chr21:29954700-29954493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
52, 105
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr21:34254553-34254334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
144, 53
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr21:17218886-17218666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
134, 24
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr21:46462917-46463144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
47, 43
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr21:20549191-20548960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
54, 120
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr21:31278509-31278729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
47, 69
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr21:13395283-13395504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
66, 105
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr21:48638019-48637807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
60, 145
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr21:15545638-15545416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr21:39313442-39313219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr21:13300879-13301107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
54, 106
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr21:22140610-22140384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr21:39883795-39884023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 77
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr21:36711926-36712161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
54, 72
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr21:17282430-17282688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr21:23821895-23822158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
58, 117
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr21:4794948-4795220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
35, 224
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr21:2359619-2359886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr21:2367067-2367329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
54, 144
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr21:4189559-4189831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 108
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr21:12616869-12617132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
44, 40
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr21:21216414-21216148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr21:23192791-23192519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr21:23683277-23683543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr21:32535705-32535970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
142, 53
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr21:41957447-41957181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
54, 165
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr21:42914019-42913750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
54, 222
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr21:46263904-46264166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
146, 129
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr21:12973523-12973210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 30
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr21:40058532-40058853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
21, 113
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr21:21480452-21480112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr21:8985276-8985633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr21:3236259-3236613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr21:12961186-12960812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 315
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr21:6764975-6764606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 123
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr21:24222814-24222440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
48, 60
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr21:37479686-37480052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
141, 59
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr21:39889017-39888652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
54, 292
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr21:3813740-3813385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
54, 64
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr21:2904735-2904372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 147
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr21:24864882-24865267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 353
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr21:20262607-20262219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
54, 306
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr21:36756342-36756717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
54, 38
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr21:25475865-25476240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
143, 38
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr21:28998180-28997781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 336
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr21:10071202-10070803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
59, 277
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr21:4282137-4281748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
28, 59
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr21:24858038-24858442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
54, 306
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr21:937779-938147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
227, 59
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr21:4998758-4998367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
54, 111
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr21:13048469-13048065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 83
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr21:15584672-15584291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 47
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr21:16188068-16187679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
47, 38
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr21:19766581-19766982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
54, 297
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr21:19957957-19958340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
104, 47
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr21:28512268-28512642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 51
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr21:33997498-33997099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 212
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr21:34738325-34738706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
59, 232
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr21:38120830-38121229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
54, 306
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr21:42558831-42559220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
54, 142
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr21:16696097-16696502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
54, 126
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr21:20045040-20044635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
141, 51
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr21:24887724-24888128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
50, 30
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr21:28810522-28810130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
125, 93
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr21:28993899-28993490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 372
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr21:20575727-20575343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 30
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr21:39401327-39401723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
54, 144
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr21:26648277-26647883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
54, 101
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr21:29214428-29214023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
52, 60
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr21:36163236-36162820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr21:395605-396011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 77
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr21:8420392-8420769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
142, 57
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr21:37322565-37322152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
48, 40
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr21:23586590-23587038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
54, 24
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr21:28734185-28733748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 309
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr21:30231973-30231530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
103, 59
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr21:34653814-34654239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
58, 24
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr21:30990541-30990119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr21:30897150-30897585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
51, 71
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr21:10514539-10514972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr21:15742370-15741909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 151
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr21:30849217-30848765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 137
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr21:33562741-33563179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 66
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr21:5898668-5898225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 50
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr21:31576241-31576668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 77
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr21:48291303-48290881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 60
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr21:4098608-4099047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 30
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr21:23478989-23478554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr21:23785755-23786209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 112
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr21:47823540-47823091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 59
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr21:44755050-44754611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 66
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr21:641311-641767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 204
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr21:643064-643504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 93
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr21:14760312-14760745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
54, 24
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr21:27863792-27863334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 105
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr21:29069601-29069146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 74
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr21:33263578-33264024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 69
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr21:34010660-34010218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
144, 44
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr21:44565978-44565542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
54, 229
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr21:33983083-33982629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 225
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr21:32297775-32297337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
54, 108
               

               
Conread position:
               
1-436
               

               
Cow position:
               
chr21:42384235-42384689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 59
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr21:37299192-37299646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 243
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr21:17643236-17642802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
54, 80
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr21:27230065-27229605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 70
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr21:33209926-33210378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 272
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr21:44671480-44671934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 251
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr21:24607112-24607575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 320
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr21:32237027-32237472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
144, 66
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr21:725163-724703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 71
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr21:28989346-28989805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
70, 47
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr21:46849392-46848936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 50
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr21:45263293-45263087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 18
               

               
Conread position:
               
2-384
               

               
Cow position:
               
chr21:11645257-11644838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
51, 207
               

               
Conread position:
               
2-385
               

               
Cow position:
               
chr21:44514993-44515393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 176
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr21:20162264-20162501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
38, 43
               

               
Conread position:
               
3-384
               

               
Cow position:
               
chr21:42540491-42540094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 323
               

               
Conread position:
               
4-252
               

               
Cow position:
               
chr21:44114400-44114145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 101
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr21:1463963-1464224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
50, 37
               

               
Conread position:
               
4-353
               

               
Cow position:
               
chr21:13089747-13089371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
97, 5
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr21:5344391-5344766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
59, 199
               

               
Conread position:
               
4-383
               

               
Cow position:
               
chr21:35897891-35897499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
50, 66
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr21:23500091-23499691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
49, 108
               

               
Conread position:
               
4-409
               

               
Cow position:
               
chr21:45915974-45915561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
46, 37
               

               
Conread position:
               
4-410
               

               
Cow position:
               
chr21:42414369-42413939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 56
               

               
Conread position:
               
4-429
               

               
Cow position:
               
chr21:20160414-20160852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 102
               

               
Conread position:
               
4-430
               

               
Cow position:
               
chr21:13128366-13127922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 16
               

               
Conread position:
               
4-430
               

               
Cow position:
               
chr21:23801390-23800951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 40
               

               
Conread position:
               
4-430
               

               
Cow position:
               
chr21:36795330-36795780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 184
               

               
Conread position:
               
4-437
               

               
Cow position:
               
chr21:25764364-25764819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
17, 103
               

               
Conread position:
               
4-443
               

               
Cow position:
               
chr21:5153347-5153809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 427
               

               
Conread position:
               
5-256
               

               
Cow position:
               
chr21:20925774-20925511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
5-384
               

               
Cow position:
               
chr21:6833783-6834177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
38, 297
               

               
Conread position:
               
5-385
               

               
Cow position:
               
chr21:32574462-32574859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 141
               

               
Conread position:
               
5-433
               

               
Cow position:
               
chr21:4399531-4399983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 68
               

               
Conread position:
               
6-285
               

               
Cow position:
               
chr21:48484708-48484415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
54, 66
               

               
Conread position:
               
6-346
               

               
Cow position:
               
chr21:5455254-5454901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
49, 101
               

               
Conread position:
               
6-385
               

               
Cow position:
               
chr21:38867835-38867459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
16, 70
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr21:16166901-16166508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
49, 236
               

               
Conread position:
               
6-431
               

               
Cow position:
               
chr21:24698214-24698658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 237
               

               
Conread position:
               
7-336
               

               
Cow position:
               
chr21:2412510-2412843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
52, 105
               

               
Conread position:
               
9-335
               

               
Cow position:
               
chr21:9862886-9862563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
49, 75
               

               
Conread position:
               
9-409
               

               
Cow position:
               
chr21:10263777-10264189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
9-423
               

               
Cow position:
               
chr21:34391231-34390807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 21
               

               
Conread position:
               
9-433
               

               
Cow position:
               
chr21:15976376-15976812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 100
               

               
Conread position:
               
9-434
               

               
Cow position:
               
chr21:9415978-9416429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
10-217
               

               
Cow position:
               
chr21:15867051-15867261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 48
               

               
Conread position:
               
10-384
               

               
Cow position:
               
chr21:43357525-43357128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
45, 98
               

               
Conread position:
               
10-431
               

               
Cow position:
               
chr21:9940442-9940012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
116, 50
               

               
Conread position:
               
10-433
               

               
Cow position:
               
chr21:33350481-33350921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 50
               

               
Conread position:
               
10-444
               

               
Cow position:
               
chr21:29942737-29943192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
45, 119
               

               
Conread position:
               
11-342
               

               
Cow position:
               
chr21:13897930-13898274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
44, 67
               

               
Conread position:
               
11-429
               

               
Cow position:
               
chr21:36819486-36819052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
42, 253
               

               
Conread position:
               
12-430
               

               
Cow position:
               
chr21:3585618-3585191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 80
               

               
Conread position:
               
12-435
               

               
Cow position:
               
chr21:44252090-44251663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
43, 159
               

               
Conread position:
               
14-383
               

               
Cow position:
               
chr21:24130821-24131196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
41, 92
               

               
Conread position:
               
14-431
               

               
Cow position:
               
chr21:21223024-21223459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 98
               

               
Conread position:
               
15-385
               

               
Cow position:
               
chr21:5971095-5970709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
40, 88
               

               
Conread position:
               
15-430
               

               
Cow position:
               
chr21:45474014-45473581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
93, 36
               

               
Conread position:
               
15-431
               

               
Cow position:
               
chr21:39403797-39403347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
36, 91
               

               
Conread position:
               
16-375
               

               
Cow position:
               
chr21:23150277-23149902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
39, 90
               

               
Conread position:
               
16-421
               

               
Cow position:
               
chr21:44826133-44825718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
129, 73
               

               
Conread position:
               
20-259
               

               
Cow position:
               
chr21:912218-911970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
58, 32
               

               
Conread position:
               
22-383
               

               
Cow position:
               
chr21:40899086-40899466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
22-435
               

               
Cow position:
               
chr21:49700288-49699860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
40, 291
               

               
Conread position:
               
23-240
               

               
Cow position:
               
chr21:13256544-13256781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
32, 111
               

               
Conread position:
               
23-433
               

               
Cow position:
               
chr21:23322332-23321898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
25-429
               

               
Cow position:
               
chr21:38900524-38900949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 284
               

               
Conread position:
               
25-434
               

               
Cow position:
               
chr21:10151546-10151985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
30, 81
               

               
Conread position:
               
26-385
               

               
Cow position:
               
chr21:19614925-19615305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 289
               

               
Conread position:
               
27-255
               

               
Cow position:
               
chr21:42905622-42905382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
118, 33
               

               
Conread position:
               
27-311
               

               
Cow position:
               
chr21:8932124-8931833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
24, 112
               

               
Conread position:
               
30-381
               

               
Cow position:
               
chr21:5636965-5636595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
35, 280
               

               
Conread position:
               
30-433
               

               
Cow position:
               
chr21:26244683-26245094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
28, 89
               

               
Conread position:
               
36-227
               

               
Cow position:
               
chr21:28907890-28907684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 167
               

               
Conread position:
               
36-331
               

               
Cow position:
               
chr21:20426302-20426605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
39-352
               

               
Cow position:
               
chr21:8351535-8351215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 6
               

               
Conread position:
               
39-404
               

               
Cow position:
               
chr21:41878241-41878620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
20, 259
               

               
Conread position:
               
41-256
               

               
Cow position:
               
chr21:42348911-42348679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
44-256
               

               
Cow position:
               
chr21:27124358-27124131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
9, 201
               

               
Conread position:
               
53-240
               

               
Cow position:
               
chr21:11877164-11877360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
57-351
               

               
Cow position:
               
chr21:37282093-37282397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
88, 193
               

               
Conread position:
               
57-421
               

               
Cow position:
               
chr21:30592514-30592141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
57-430
               

               
Cow position:
               
chr21:45330158-45329773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 50
               

               
Conread position:
               
57-438
               

               
Cow position:
               
chr21:31662244-31662652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 165
               

               
Conread position:
               
60-252
               

               
Cow position:
               
chr21:13303606-13303811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
85, 115
               

               
Conread position:
               
60-331
               

               
Cow position:
               
chr21:39765635-39765920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
16, 127
               

               
Conread position:
               
60-338
               

               
Cow position:
               
chr21:32665987-32665693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
9, 169
               

               
Conread position:
               
60-384
               

               
Cow position:
               
chr21:23535500-23535837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
37, 226
               

               
Conread position:
               
60-384
               

               
Cow position:
               
chr21:38918002-38918326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
64-441
               

               
Cow position:
               
chr21:42053475-42053092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
6, 133
               

               
Conread position:
               
68-383
               

               
Cow position:
               
chr21:41597610-41597938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
75, 208
               

               
Conread position:
               
69-428
               

               
Cow position:
               
chr21:16270528-16270876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
52, 36
               

               
Conread position:
               
71-385
               

               
Cow position:
               
chr21:3498296-3498622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 199
               

               
Conread position:
               
71-388
               

               
Cow position:
               
chr21:6619178-6618863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
71-392
               

               
Cow position:
               
chr21:34159756-34160089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
11, 24
               

               
Conread position:
               
71-393
               

               
Cow position:
               
chr21:24598457-24598796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 228
               

               
Conread position:
               
71-428
               

               
Cow position:
               
chr21:19258624-19258993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
75, 214
               

               
Conread position:
               
71-431
               

               
Cow position:
               
chr21:4276796-4276426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 228
               

               
Conread position:
               
71-431
               

               
Cow position:
               
chr21:35996969-35997349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 245
               

               
Conread position:
               
71-433
               

               
Cow position:
               
chr21:41579549-41579936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
71, 34
               

               
Conread position:
               
71-438
               

               
Cow position:
               
chr21:8206588-8206955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
186, 74
               

               
Conread position:
               
72-256
               

               
Cow position:
               
chr21:24094945-24094753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
72-257
               

               
Cow position:
               
chr21:37361675-37361480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
23, 102
               

               
Conread position:
               
72-374
               

               
Cow position:
               
chr21:34053388-34053085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 145
               

               
Conread position:
               
72-379
               

               
Cow position:
               
chr21:41620918-41621248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
71, 239
               

               
Conread position:
               
72-431
               

               
Cow position:
               
chr21:25800213-25800577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
158, 25
               

               
Conread position:
               
72-433
               

               
Cow position:
               
chr21:33520-33899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
72, 124
               

               
Conread position:
               
72-433
               

               
Cow position:
               
chr21:3818015-3818388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
137, 228
               

               
Conread position:
               
72-440
               

               
Cow position:
               
chr21:33791567-33791192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
71, 10
               

               
Conread position:
               
74-403
               

               
Cow position:
               
chr21:13738372-13738702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
74-418
               

               
Cow position:
               
chr21:22860803-22861167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
94, 31
               

               
Conread position:
               
77-329
               

               
Cow position:
               
chr21:31676302-31676572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 225
               

               
Conread position:
               
77-441
               

               
Cow position:
               
chr21:32339931-32339552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
66, 20
               

               
Conread position:
               
78-256
               

               
Cow position:
               
chr21:20910286-20910100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
74, 106
               

               
Conread position:
               
78-302
               

               
Cow position:
               
chr21:5425786-5426022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
66, 27
               

               
Conread position:
               
78-334
               

               
Cow position:
               
chr21:21077134-21077404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 209
               

               
Conread position:
               
78-356
               

               
Cow position:
               
chr21:30150464-30150163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
30, 219
               

               
Conread position:
               
78-384
               

               
Cow position:
               
chr21:18378650-18378966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
66, 30
               

               
Conread position:
               
78-384
               

               
Cow position:
               
chr21:29002357-29002025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
64, 242
               

               
Conread position:
               
78-384
               

               
Cow position:
               
chr21:45330803-45330479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
63, 236
               

               
Conread position:
               
78-400
               

               
Cow position:
               
chr21:35061893-35062227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 283
               

               
Conread position:
               
78-421
               

               
Cow position:
               
chr21:12801939-12801579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
66, 24
               

               
Conread position:
               
78-421
               

               
Cow position:
               
chr21:13585253-13584893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
149, 24
               

               
Conread position:
               
78-431
               

               
Cow position:
               
chr21:6051311-6051681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
65, 350
               

               
Conread position:
               
78-431
               

               
Cow position:
               
chr21:33947439-33947076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
60, 24
               

               
Conread position:
               
78-431
               

               
Cow position:
               
chr21:45355641-45356011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
58, 169
               

               
Conread position:
               
78-431
               

               
Cow position:
               
chr21:46242434-46242063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
78-433
               

               
Cow position:
               
chr21:42135819-42135436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
78-441
               

               
Cow position:
               
chr21:1058882-1059263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
66, 22
               

               
Conread position:
               
78-445
               

               
Cow position:
               
chr21:29484789-29485170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
77, 29
               

               
Conread position:
               
79-393
               

               
Cow position:
               
chr21:42841785-42841459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
66, 23
               

               
Conread position:
               
79-421
               

               
Cow position:
               
chr21:31253341-31253701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 199
               

               
Conread position:
               
79-431
               

               
Cow position:
               
chr21:34565407-34565037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 285
               

               
Conread position:
               
80-285
               

               
Cow position:
               
chr21:29248037-29247828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
80-375
               

               
Cow position:
               
chr21:10118360-10118678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 222
               

               
Conread position:
               
81-343
               

               
Cow position:
               
chr21:28443571-28443285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 218
               

               
Conread position:
               
81-384
               

               
Cow position:
               
chr21:10601560-10601247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
81-431
               

               
Cow position:
               
chr21:18942021-18941657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 224
               

               
Conread position:
               
82-300
               

               
Cow position:
               
chr21:28944555-28944319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 170
               

               
Conread position:
               
82-393
               

               
Cow position:
               
chr21:32559545-32559227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 122
               

               
Conread position:
               
82-431
               

               
Cow position:
               
chr21:34739658-34740022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
63, 20
               

               
Conread position:
               
82-441
               

               
Cow position:
               
chr21:5426755-5427125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
83-441
               

               
Cow position:
               
chr21:13365151-13365530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 230
               

               
Conread position:
               
84-384
               

               
Cow position:
               
chr21:13488331-13488655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 7
               

               
Conread position:
               
84-388
               

               
Cow position:
               
chr21:18828498-18828169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
59, 21
               

               
Conread position:
               
84-430
               

               
Cow position:
               
chr21:47764301-47763941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 26
               

               
Conread position:
               
85-433
               

               
Cow position:
               
chr21:802483-802137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
8, 160
               

               
Conread position:
               
85-442
               

               
Cow position:
               
chr21:40589671-40589293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
60, 161
               

               
Conread position:
               
90-379
               

               
Cow position:
               
chr21:18845198-18844889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
91-420
               

               
Cow position:
               
chr21:15911218-15911570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
45, 85
               

               
Conread position:
               
91-431
               

               
Cow position:
               
chr21:4723297-4723658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
93-389
               

               
Cow position:
               
chr21:37355512-37355808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 141
               

               
Conread position:
               
93-412
               

               
Cow position:
               
chr21:37845928-37845604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
51, 139
               

               
Conread position:
               
96-337
               

               
Cow position:
               
chr21:49662294-49662040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
96-400
               

               
Cow position:
               
chr21:18790733-18790421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
59, 237
               

               
Conread position:
               
102-441
               

               
Cow position:
               
chr21:27146163-27145805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
38, 197
               

               
Conread position:
               
105-413
               

               
Cow position:
               
chr21:13754634-13754946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
38, 52
               

               
Conread position:
               
105-433
               

               
Cow position:
               
chr21:10000912-10001255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
40, 66
               

               
Conread position:
               
134-382
               

               
Cow position:
               
chr21:17856416-17856670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 16
               

               
Conread position:
               
138-384
               

               
Cow position:
               
chr21:18155696-18155438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
77, 153
               

               
Conread position:
               
138-431
               

               
Cow position:
               
chr21:12087464-12087773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
23, 76
               

               
Conread position:
               
140-431
               

               
Cow position:
               
chr21:11676168-11675876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 65
               

               
Conread position:
               
141-404
               

               
Cow position:
               
chr21:16981756-16982023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
143-384
               

               
Cow position:
               
chr21:12462093-12461839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
143-393
               

               
Cow position:
               
chr21:14452114-14452372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 140
               

               
Conread position:
               
143-423
               

               
Cow position:
               
chr21:45923765-45923486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
78, 155
               

               
Conread position:
               
143-433
               

               
Cow position:
               
chr21:24642397-24642692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 161
               

               
Conread position:
               
143-434
               

               
Cow position:
               
chr21:20152825-20153134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 165
               

               
Conread position:
               
144-384
               

               
Cow position:
               
chr21:36297369-36297621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 182
               

               
Conread position:
               
144-400
               

               
Cow position:
               
chr21:9990396-9990655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
84, 134
               

               
Conread position:
               
144-400
               

               
Cow position:
               
chr21:20418805-20418537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
75, 151
               

               
Conread position:
               
144-433
               

               
Cow position:
               
chr21:957551-957850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
16, 157
               

               
Conread position:
               
144-433
               

               
Cow position:
               
chr21:30222225-30222525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
146-431
               

               
Cow position:
               
chr21:21181057-21181354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
15, 157
               

               
Conread position:
               
147-433
               

               
Cow position:
               
chr21:29978872-29978580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
82, 23
               

               
Conread position:
               
149-431
               

               
Cow position:
               
chr21:46607702-46607416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
150-393
               

               
Cow position:
               
chr21:20260436-20260181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
150-432
               

               
Cow position:
               
chr21:45921174-45920880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 147
               

               
Conread position:
               
150-435
               

               
Cow position:
               
chr21:2657704-2657989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 74
               

               
Conread position:
               
150-437
               

               
Cow position:
               
chr21:17183806-17184101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 125
               

               
Conread position:
               
152-346
               

               
Cow position:
               
chr21:39450277-39450071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
61, 148
               

               
Conread position:
               
152-393
               

               
Cow position:
               
chr21:38482808-38483043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
9, 66
               

               
Conread position:
               
153-372
               

               
Cow position:
               
chr21:38929494-38929274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
70, 108
               

               
Conread position:
               
153-384
               

               
Cow position:
               
chr21:10007749-10007511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
63, 133
               

               
Conread position:
               
153-384
               

               
Cow position:
               
chr21:17875303-17875065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
66, 141
               

               
Conread position:
               
153-384
               

               
Cow position:
               
chr21:36789686-36789923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
153-394
               

               
Cow position:
               
chr21:37886303-37886542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 138
               

               
Conread position:
               
153-430
               

               
Cow position:
               
chr21:6316098-6316390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
45, 157
               

               
Conread position:
               
153-431
               

               
Cow position:
               
chr21:9353333-9353625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
153-431
               

               
Cow position:
               
chr21:25286402-25286691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 137
               

               
Conread position:
               
153-440
               

               
Cow position:
               
chr21:12723049-12723336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
105, 147
               

               
Conread position:
               
154-405
               

               
Cow position:
               
chr21:27624599-27624850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
82, 105
               

               
Conread position:
               
155-431
               

               
Cow position:
               
chr21:17428393-17428673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
74, 124
               

               
Conread position:
               
155-438
               

               
Cow position:
               
chr21:22353340-22353053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
74, 124
               

               
Conread position:
               
158-392
               

               
Cow position:
               
chr21:12301606-12301374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
101, 28
               

               
Conread position:
               
158-413
               

               
Cow position:
               
chr21:1591444-1591714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
29, 138
               

               
Conread position:
               
158-430
               

               
Cow position:
               
chr21:10673025-10673298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
76, 46
               

               
Conread position:
               
161-333
               

               
Cow position:
               
chr21:17672742-17672569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
82, 128
               

               
Conread position:
               
161-425
               

               
Cow position:
               
chr21:32904258-32903983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
55, 179
               

               
Conread position:
               
164-404
               

               
Cow position:
               
chr21:35437565-35437338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
222, 72
               

               
Conread position:
               
165-430
               

               
Cow position:
               
chr21:41514705-41514970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 192
               

               
Conread position:
               
166-384
               

               
Cow position:
               
chr21:10561682-10561455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
62, 132
               

               
Conread position:
               
166-429
               

               
Cow position:
               
chr21:49649536-49649804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 179
               

               
Conread position:
               
168-410
               

               
Cow position:
               
chr21:22121426-22121661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
90, 61
               

               
Conread position:
               
168-430
               

               
Cow position:
               
chr21:31200077-31200336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
49, 152
               

               
Conread position:
               
172-433
               

               
Cow position:
               
chr21:30835270-30835543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
49, 137
               

               
Conread position:
               
174-431
               

               
Cow position:
               
chr21:40769219-40769471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
212, 60
               

               
Conread position:
               
177-410
               

               
Cow position:
               
chr21:21140440-21140671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 76
               

               
Conread position:
               
177-421
               

               
Cow position:
               
chr21:22210331-22210078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
57, 115
               

               
Conread position:
               
188-431
               

               
Cow position:
               
chr21:46552182-46551924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
33, 130
               

               
Conread position:
               
189-431
               

               
Cow position:
               
chr21:31661930-31662181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
192-433
               

               
Cow position:
               
chr21:1511219-1511469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 111
               

               
Conread position:
               
200-432
               

               
Cow position:
               
chr21:47715608-47715367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
16, 68
               

               
Conread position:
               
201-429
               

               
Cow position:
               
chr21:23397908-23397671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
57, 99
               

               
Conread position:
               
205-431
               

               
Cow position:
               
chr21:26753440-26753669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
181, 0
               

               
Conread position:
               
208-431
               

               
Cow position:
               
chr21:13256545-13256336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
5, 77
               

               
Conread position:
               
210-430
               

               
Cow position:
               
chr21:31004710-31004499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
217-431
               

               
Cow position:
               
chr21:13358286-13358506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
73, 33
               

               
Conread position:
               
228-431
               

               
Cow position:
               
chr21:1885817-1885613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
50, 65
               

               
Conread position:
               
243-421
               

               
Cow position:
               
chr21:13737036-13737221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
15, 56
               

               
Conread position:
               
244-427
               

               
Cow position:
               
chr21:15239274-15239452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
158, 28
               

               
Conread position:
               
244-430
               

               
Cow position:
               
chr21:36371477-36371660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
156, 45
               

               
Conread position:
               
244-430
               

               
Cow position:
               
chr21:37718453-37718273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
246-399
               

               
Cow position:
               
chr21:38774178-38774333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 117
               

               
Conread position:
               
251-421
               

               
Cow position:
               
chr21:8184280-8184446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
148, 94
               

               
Conread position:
               
254-415
               

               
Cow position:
               
chr21:39509388-39509227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
146, 94
               

               
Conread position:
               
263-431
               

               
Cow position:
               
chr21:23767879-23768048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
132, 29
               

               
Conread position:
               
277-431
               

               
Cow position:
               
chr21:18135851-18135697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
109, 52
               

               
Conread position:
               
288-432
               

               
Cow position:
               
chr21:8671429-8671575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
292-420
               

               
Cow position:
               
chr21:41615584-41615455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 20
               
Show alignments to all cow chromosomes.