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Cow genome map

           
Conread name:
           
rcte16_d7.y1
        

               
Conread position:
               
1-211
               

               
Cow position:
               
chr28:13356913-13356701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
143, 59
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr28:10589360-10589155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
60, 147
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr28:12938671-12938891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
54, 70
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr28:19564924-19564700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr28:3011751-3011533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr28:19358545-19358313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr28:3479934-3480196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr28:16388320-16388556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
228, 29
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr28:7590514-7590246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
40, 54
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr28:10879443-10879703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
47, 168
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr28:18717456-18717186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
54, 82
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr28:13371507-13371236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
26, 130
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr28:15600933-15601196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr28:3246012-3246275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
143, 10
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr28:7685007-7684712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr28:11759868-11759572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 239
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr28:22171060-22170695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr28:3750988-3751332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr28:10762343-10762680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr28:8911551-8911195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
53, 288
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr28:9851305-9851644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
172, 59
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr28:29392671-29393047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
54, 123
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr28:4587765-4588138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
54, 109
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr28:10606943-10606588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
54, 87
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr28:30977955-30978319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
53, 32
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr28:9285694-9285318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
54, 8
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr28:25701191-25700808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
49, 107
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr28:3256470-3256858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
54, 99
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr28:12942061-12942440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 51
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr28:22372006-22371619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 30
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr28:10529796-10529423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
167, 57
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr28:12758838-12758433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr28:12430276-12430673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
24, 89
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr28:3024240-3023844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 62
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr28:7549393-7548989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr28:8347391-8347800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
58, 328
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr28:10682153-10681756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 185
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr28:11585538-11585133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr28:11752476-11752070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
54, 298
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr28:14150907-14151291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 51
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr28:15272590-15272204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
142, 52
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr28:26103402-26103771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
165, 51
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr28:26614564-26614942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
54, 132
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr28:26727743-26727349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
54, 134
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr28:20124458-20124855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 59
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr28:10674374-10674744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
88, 59
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr28:10642347-10641960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 59
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr28:13267450-13267863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 301
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr28:5826617-5827025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
54, 289
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr28:31972083-31971676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
54, 113
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr28:6486267-6486673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
59, 70
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr28:6971670-6971269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr28:11687356-11686949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
54, 69
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr28:14997733-14998146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
59, 105
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr28:20265045-20265479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
54, 118
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr28:25806266-25806652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
218, 59
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr28:33163788-33163385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
50, 43
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr28:16346847-16346450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
54, 84
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr28:32300697-32300272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 388
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr28:21363427-21363826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 39
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr28:21380550-21380971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 306
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr28:26922701-26922276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
52, 33
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr28:13693418-13693853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 367
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr28:30303518-30303095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
142, 38
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr28:10616281-10615840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
54, 72
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr28:7268264-7267834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 51
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr28:25563747-25564201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 59
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr28:30327415-30326975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 118
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr28:3770001-3769552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 120
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr28:5475355-5474914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
54, 128
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr28:20312943-20313396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 179
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr28:23231396-23230965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 72
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr28:23675817-23676257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
144, 47
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr28:661783-662229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr28:3144218-3143757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
142, 59
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr28:4070634-4071087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
42, 8
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr28:5203874-5204316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
143, 48
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr28:21844625-21845078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 105
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr28:23793650-23793191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
54, 123
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr28:24966057-24966508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
60, 105
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr28:8787219-8787661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 116
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr28:9426673-9426229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 152
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr28:16211428-16210979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 250
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr28:21868120-21868579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
51, 106
               

               
Conread position:
               
1-436
               

               
Cow position:
               
chr28:5817521-5817964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 35
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr28:21598584-21598125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr28:25826194-25825740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
54, 78
               

               
Conread position:
               
2-252
               

               
Cow position:
               
chr28:16441060-16441316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
146, 58
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr28:10534256-10533997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
57, 7
               

               
Conread position:
               
2-377
               

               
Cow position:
               
chr28:7751632-7751239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
2-384
               

               
Cow position:
               
chr28:2961148-2960761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
143, 32
               

               
Conread position:
               
2-434
               

               
Cow position:
               
chr28:13473977-13474420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 82
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr28:4536142-4536393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
52, 28
               

               
Conread position:
               
3-432
               

               
Cow position:
               
chr28:19222474-19222031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 106
               

               
Conread position:
               
3-433
               

               
Cow position:
               
chr28:33884081-33884522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
50, 32
               

               
Conread position:
               
4-385
               

               
Cow position:
               
chr28:3745875-3746272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
55, 68
               

               
Conread position:
               
4-386
               

               
Cow position:
               
chr28:33697785-33698182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
55, 108
               

               
Conread position:
               
4-430
               

               
Cow position:
               
chr28:15677572-15678004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 56
               

               
Conread position:
               
5-331
               

               
Cow position:
               
chr28:6577332-6577656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
140, 43
               

               
Conread position:
               
5-363
               

               
Cow position:
               
chr28:22279511-22279152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
16, 56
               

               
Conread position:
               
5-388
               

               
Cow position:
               
chr28:4046820-4047192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 95
               

               
Conread position:
               
5-410
               

               
Cow position:
               
chr28:11787033-11786618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 67
               

               
Conread position:
               
6-250
               

               
Cow position:
               
chr28:2279993-2279735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
6-353
               

               
Cow position:
               
chr28:15590670-15591014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
49, 64
               

               
Conread position:
               
6-393
               

               
Cow position:
               
chr28:11426862-11426462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
137, 38
               

               
Conread position:
               
6-399
               

               
Cow position:
               
chr28:16686708-16687111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 68
               

               
Conread position:
               
7-274
               

               
Cow position:
               
chr28:11827161-11827451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
45, 105
               

               
Conread position:
               
9-337
               

               
Cow position:
               
chr28:19222917-19222580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
42, 63
               

               
Conread position:
               
9-373
               

               
Cow position:
               
chr28:14657373-14657755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
39, 45
               

               
Conread position:
               
9-384
               

               
Cow position:
               
chr28:7512913-7512515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
134, 51
               

               
Conread position:
               
9-384
               

               
Cow position:
               
chr28:10744882-10745283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
51, 296
               

               
Conread position:
               
9-384
               

               
Cow position:
               
chr28:17638187-17637796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
134, 68
               

               
Conread position:
               
9-408
               

               
Cow position:
               
chr28:5792379-5792804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
26, 46
               

               
Conread position:
               
9-429
               

               
Cow position:
               
chr28:21354901-21355348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 202
               

               
Conread position:
               
9-434
               

               
Cow position:
               
chr28:16085002-16085445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 77
               

               
Conread position:
               
9-436
               

               
Cow position:
               
chr28:18590947-18591394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
50, 85
               

               
Conread position:
               
9-440
               

               
Cow position:
               
chr28:12619242-12619702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
44, 49
               

               
Conread position:
               
10-374
               

               
Cow position:
               
chr28:18462946-18462553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
45, 20
               

               
Conread position:
               
11-256
               

               
Cow position:
               
chr28:21129444-21129189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
11-431
               

               
Cow position:
               
chr28:4282813-4282374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 189
               

               
Conread position:
               
12-383
               

               
Cow position:
               
chr28:34208398-34208777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
43, 55
               

               
Conread position:
               
12-384
               

               
Cow position:
               
chr28:5771046-5771435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
43, 181
               

               
Conread position:
               
12-431
               

               
Cow position:
               
chr28:4308218-4307779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 29
               

               
Conread position:
               
13-363
               

               
Cow position:
               
chr28:16401578-16401947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
13-417
               

               
Cow position:
               
chr28:2814817-2814404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
13-434
               

               
Cow position:
               
chr28:7698296-7697861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
130, 38
               

               
Conread position:
               
13-445
               

               
Cow position:
               
chr28:26684796-26685249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 104
               

               
Conread position:
               
14-200
               

               
Cow position:
               
chr28:7009324-7009142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
150, 46
               

               
Conread position:
               
14-384
               

               
Cow position:
               
chr28:29199404-29199799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
25-224
               

               
Cow position:
               
chr28:16879572-16879372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
116, 35
               

               
Conread position:
               
25-344
               

               
Cow position:
               
chr28:16622706-16623027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 40
               

               
Conread position:
               
25-430
               

               
Cow position:
               
chr28:6059774-6059352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
28, 45
               

               
Conread position:
               
33-433
               

               
Cow position:
               
chr28:31110301-31109883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
109, 11
               

               
Conread position:
               
33-439
               

               
Cow position:
               
chr28:23008027-23007603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 278
               

               
Conread position:
               
36-256
               

               
Cow position:
               
chr28:16350336-16350118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
36-410
               

               
Cow position:
               
chr28:10035119-10035484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
19, 71
               

               
Conread position:
               
39-404
               

               
Cow position:
               
chr28:7228677-7228296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 68
               

               
Conread position:
               
44-262
               

               
Cow position:
               
chr28:16450979-16450766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
97, 16
               

               
Conread position:
               
53-256
               

               
Cow position:
               
chr28:26784746-26784528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
53-405
               

               
Cow position:
               
chr28:15044134-15043769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
38, 123
               

               
Conread position:
               
53-431
               

               
Cow position:
               
chr28:12047172-12046794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
57-394
               

               
Cow position:
               
chr28:27218048-27218402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
86, 20
               

               
Conread position:
               
57-433
               

               
Cow position:
               
chr28:26743348-26743747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
85, 48
               

               
Conread position:
               
60-431
               

               
Cow position:
               
chr28:616132-616500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
169, 45
               

               
Conread position:
               
60-431
               

               
Cow position:
               
chr28:29455928-29455552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
84, 193
               

               
Conread position:
               
60-432
               

               
Cow position:
               
chr28:5128998-5128607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
59, 45
               

               
Conread position:
               
64-393
               

               
Cow position:
               
chr28:25596364-25596707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
6, 261
               

               
Conread position:
               
64-431
               

               
Cow position:
               
chr28:20963798-20963410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 19
               

               
Conread position:
               
65-384
               

               
Cow position:
               
chr28:14234706-14235023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
66-393
               

               
Cow position:
               
chr28:33051754-33052116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
68-256
               

               
Cow position:
               
chr28:16244022-16243822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 112
               

               
Conread position:
               
68-393
               

               
Cow position:
               
chr28:11380306-11379962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
76, 249
               

               
Conread position:
               
68-433
               

               
Cow position:
               
chr28:3493047-3492663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 37
               

               
Conread position:
               
71-299
               

               
Cow position:
               
chr28:23702742-23702969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
9, 153
               

               
Conread position:
               
71-433
               

               
Cow position:
               
chr28:29434687-29434307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
11, 177
               

               
Conread position:
               
72-256
               

               
Cow position:
               
chr28:16253114-16252923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
72-351
               

               
Cow position:
               
chr28:7606968-7607272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 236
               

               
Conread position:
               
72-387
               

               
Cow position:
               
chr28:16487061-16487372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
72-407
               

               
Cow position:
               
chr28:23621289-23621632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 33
               

               
Conread position:
               
72-432
               

               
Cow position:
               
chr28:34229970-34230346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 128
               

               
Conread position:
               
72-433
               

               
Cow position:
               
chr28:19026262-19025884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
85, 116
               

               
Conread position:
               
73-428
               

               
Cow position:
               
chr28:9822231-9821854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
71, 32
               

               
Conread position:
               
74-379
               

               
Cow position:
               
chr28:22484991-22485317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
71, 48
               

               
Conread position:
               
74-431
               

               
Cow position:
               
chr28:19133526-19133893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
60, 199
               

               
Conread position:
               
74-437
               

               
Cow position:
               
chr28:18934195-18934579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 173
               

               
Conread position:
               
77-337
               

               
Cow position:
               
chr28:24646286-24646561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
65, 181
               

               
Conread position:
               
77-384
               

               
Cow position:
               
chr28:20409147-20409456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
5, 71
               

               
Conread position:
               
77-396
               

               
Cow position:
               
chr28:16370328-16370001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
66, 28
               

               
Conread position:
               
78-254
               

               
Cow position:
               
chr28:5773389-5773571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
78-329
               

               
Cow position:
               
chr28:15688788-15689058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
78-372
               

               
Cow position:
               
chr28:4057733-4058039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 106
               

               
Conread position:
               
78-393
               

               
Cow position:
               
chr28:2862608-2862947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
65, 242
               

               
Conread position:
               
78-409
               

               
Cow position:
               
chr28:17153529-17153848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
78-429
               

               
Cow position:
               
chr28:21873519-21873876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 134
               

               
Conread position:
               
78-429
               

               
Cow position:
               
chr28:26719107-26719460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
79, 49
               

               
Conread position:
               
78-430
               

               
Cow position:
               
chr28:9177007-9176641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
65, 121
               

               
Conread position:
               
78-431
               

               
Cow position:
               
chr28:34199351-34198989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 112
               

               
Conread position:
               
79-380
               

               
Cow position:
               
chr28:4938586-4938874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
78, 201
               

               
Conread position:
               
79-432
               

               
Cow position:
               
chr28:5236852-5236486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
38, 211
               

               
Conread position:
               
80-377
               

               
Cow position:
               
chr28:21502144-21502454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
80-393
               

               
Cow position:
               
chr28:13936165-13936476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
65, 152
               

               
Conread position:
               
80-401
               

               
Cow position:
               
chr28:14218727-14218389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
64, 250
               

               
Conread position:
               
80-438
               

               
Cow position:
               
chr28:22345768-22346147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
62, 52
               

               
Conread position:
               
81-256
               

               
Cow position:
               
chr28:2905330-2905512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
61, 164
               

               
Conread position:
               
81-393
               

               
Cow position:
               
chr28:8408486-8408813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 224
               

               
Conread position:
               
81-441
               

               
Cow position:
               
chr28:30608431-30608058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
82-386
               

               
Cow position:
               
chr28:34636429-34636737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
82-433
               

               
Cow position:
               
chr28:2898746-2899110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
61, 191
               

               
Conread position:
               
84-393
               

               
Cow position:
               
chr28:4841643-4841311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
52, 5
               

               
Conread position:
               
86-431
               

               
Cow position:
               
chr28:11501137-11500765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 102
               

               
Conread position:
               
90-346
               

               
Cow position:
               
chr28:13902200-13901941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
55, 202
               

               
Conread position:
               
90-433
               

               
Cow position:
               
chr28:14649106-14649463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 265
               

               
Conread position:
               
90-435
               

               
Cow position:
               
chr28:11423045-11422693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
92-421
               

               
Cow position:
               
chr28:9636696-9636348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 157
               

               
Conread position:
               
97-422
               

               
Cow position:
               
chr28:11884757-11884411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
46, 202
               

               
Conread position:
               
102-430
               

               
Cow position:
               
chr28:5144752-5144403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
42, 208
               

               
Conread position:
               
102-431
               

               
Cow position:
               
chr28:4275060-4274725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
115, 86
               

               
Conread position:
               
120-412
               

               
Cow position:
               
chr28:21569986-21570290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 47
               

               
Conread position:
               
141-429
               

               
Cow position:
               
chr28:15082108-15081805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
20, 167
               

               
Conread position:
               
143-435
               

               
Cow position:
               
chr28:10053516-10053204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 285
               

               
Conread position:
               
144-296
               

               
Cow position:
               
chr28:11829117-11828961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 143
               

               
Conread position:
               
144-384
               

               
Cow position:
               
chr28:2132097-2131855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
71, 52
               

               
Conread position:
               
144-384
               

               
Cow position:
               
chr28:29416891-29416648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 132
               

               
Conread position:
               
144-404
               

               
Cow position:
               
chr28:25283029-25283286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
10, 6
               

               
Conread position:
               
144-435
               

               
Cow position:
               
chr28:11866844-11866544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
48, 120
               

               
Conread position:
               
145-388
               

               
Cow position:
               
chr28:30937840-30937595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
84, 150
               

               
Conread position:
               
147-445
               

               
Cow position:
               
chr28:2090988-2091297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 122
               

               
Conread position:
               
148-373
               

               
Cow position:
               
chr28:26901245-26901015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
69, 199
               

               
Conread position:
               
148-385
               

               
Cow position:
               
chr28:4016364-4016601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 5
               

               
Conread position:
               
149-431
               

               
Cow position:
               
chr28:6643452-6643164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
7, 70
               

               
Conread position:
               
150-433
               

               
Cow position:
               
chr28:4881418-4881119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 161
               

               
Conread position:
               
152-430
               

               
Cow position:
               
chr28:25796954-25797236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
7, 68
               

               
Conread position:
               
153-353
               

               
Cow position:
               
chr28:9928450-9928253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
66, 30
               

               
Conread position:
               
153-362
               

               
Cow position:
               
chr28:2291884-2291675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 77
               

               
Conread position:
               
153-385
               

               
Cow position:
               
chr28:26982912-26982668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
153-393
               

               
Cow position:
               
chr28:7345368-7345608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
105, 58
               

               
Conread position:
               
153-430
               

               
Cow position:
               
chr28:2752666-2752376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
153-431
               

               
Cow position:
               
chr28:11007011-11007319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
153-434
               

               
Cow position:
               
chr28:4884432-4884131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 181
               

               
Conread position:
               
153-435
               

               
Cow position:
               
chr28:5437257-5436966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 149
               

               
Conread position:
               
153-436
               

               
Cow position:
               
chr28:9684486-9684212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
86, 78
               

               
Conread position:
               
154-384
               

               
Cow position:
               
chr28:4158790-4159024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
75, 149
               

               
Conread position:
               
154-430
               

               
Cow position:
               
chr28:4643931-4643652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 55
               

               
Conread position:
               
157-420
               

               
Cow position:
               
chr28:32365680-32365954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
22, 78
               

               
Conread position:
               
158-354
               

               
Cow position:
               
chr28:22613763-22613959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
81, 135
               

               
Conread position:
               
158-399
               

               
Cow position:
               
chr28:4098678-4098915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 82
               

               
Conread position:
               
158-433
               

               
Cow position:
               
chr28:4835006-4834724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
71, 126
               

               
Conread position:
               
162-445
               

               
Cow position:
               
chr28:14494678-14494956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
225, 49
               

               
Conread position:
               
166-384
               

               
Cow position:
               
chr28:4440147-4440365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
49, 66
               

               
Conread position:
               
166-431
               

               
Cow position:
               
chr28:14508522-14508250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
68, 21
               

               
Conread position:
               
167-438
               

               
Cow position:
               
chr28:4763722-4764005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
50, 15
               

               
Conread position:
               
168-415
               

               
Cow position:
               
chr28:17362743-17362499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
68, 94
               

               
Conread position:
               
168-431
               

               
Cow position:
               
chr28:23668940-23668662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
61, 162
               

               
Conread position:
               
168-431
               

               
Cow position:
               
chr28:33285267-33284991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
169-405
               

               
Cow position:
               
chr28:15577414-15577171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 149
               

               
Conread position:
               
171-429
               

               
Cow position:
               
chr28:30746879-30746612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
50, 39
               

               
Conread position:
               
173-382
               

               
Cow position:
               
chr28:9812134-9812345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 116
               

               
Conread position:
               
187-408
               

               
Cow position:
               
chr28:22829796-22830017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 102
               

               
Conread position:
               
187-433
               

               
Cow position:
               
chr28:7009110-7008857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 105
               

               
Conread position:
               
197-430
               

               
Cow position:
               
chr28:5406428-5406669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
37, 154
               

               
Conread position:
               
201-431
               

               
Cow position:
               
chr28:12998988-12999213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
180, 31
               

               
Conread position:
               
204-431
               

               
Cow position:
               
chr28:1202349-1202126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
213-430
               

               
Cow position:
               
chr28:9237208-9237431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
45, 108
               

               
Conread position:
               
244-398
               

               
Cow position:
               
chr28:33485567-33485720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
244-430
               

               
Cow position:
               
chr28:7540227-7540040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
159, 48
               

               
Conread position:
               
244-431
               

               
Cow position:
               
chr28:19253412-19253598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
244-431
               

               
Cow position:
               
chr28:31166053-31165864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
256-431
               

               
Cow position:
               
chr28:7805480-7805303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
130, 57
               

               
Conread position:
               
259-438
               

               
Cow position:
               
chr28:20275074-20275254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
135, 120
               

               
Conread position:
               
260-430
               

               
Cow position:
               
chr28:11181216-11181044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
88, 32
               

               
Conread position:
               
266-430
               

               
Cow position:
               
chr28:6993656-6993499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
271-431
               

               
Cow position:
               
chr28:8335919-8336080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
129, 10
               

               
Conread position:
               
277-431
               

               
Cow position:
               
chr28:9294530-9294374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
108, 32
               

               
Conread position:
               
296-431
               

               
Cow position:
               
chr28:5979904-5980040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
297-431
               

               
Cow position:
               
chr28:25340255-25340390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
103, 61
               
Show alignments to all cow chromosomes.