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Cow genome map

           
Conread name:
           
rcte16_d7.y1
        

               
Conread position:
               
1-197
               

               
Cow position:
               
chr4:20117191-20116992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
54, 24
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr4:25354210-25354426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 82
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr4:9658-9442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
52, 69
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr4:38945711-38945921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
135, 34
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr4:19255980-19256196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
144, 59
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr4:55508764-55508535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 110
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr4:51425526-51425758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr4:12464503-12464740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr4:40576250-40576022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
142, 51
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:6166671-6166427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 108
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr4:46708871-46708608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
110, 59
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr4:53970007-53970244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
150, 59
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr4:56409838-56410104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
59, 106
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:66112418-66112152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
129, 59
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:17124635-17124374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:19558383-19558641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
69, 105
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr4:5610413-5610147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr4:24119255-24118983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr4:67392617-67392883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
54, 32
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr4:26549112-26549384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr4:29710386-29710114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 240
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr4:43370194-43369926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
47, 266
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr4:61999796-61999536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
54, 66
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr4:38309479-38309212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
54, 239
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr4:22743985-22744279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
142, 57
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr4:11091024-11090738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
144, 60
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:14159468-14159160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr4:29813877-29813579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
54, 142
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr4:16239483-16239180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
43, 210
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr4:49992743-49993044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
31, 59
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr4:561058-561393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
141, 104
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr4:11100008-11099675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr4:1915919-1915576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
54, 69
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr4:24458443-24458097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
52, 107
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr4:8692503-8692166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
81, 59
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr4:48137570-48137921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
47, 93
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr4:56233348-56233691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 104
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr4:11901904-11901551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 48
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr4:22850064-22849701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 65
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr4:480351-479992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
54, 355
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr4:22051812-22051452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
53, 78
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr4:10055867-10056236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
47, 192
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr4:19497591-19497237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
142, 51
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr4:11671110-11671480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
79, 47
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr4:37620231-37619848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 93
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr4:285312-285691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr4:64072692-64072304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
58, 40
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr4:58834743-58834350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
115, 40
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr4:53207964-53208349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
150, 40
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr4:1014726-1015127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
142, 59
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr4:3388204-3388601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
54, 164
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr4:10905800-10905408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
54, 21
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr4:10916181-10915779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
54, 102
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr4:11187115-11187508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr4:13589750-13590140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
107, 59
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr4:16799532-16799129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
141, 47
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr4:19265229-19265630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr4:27540277-27540676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
59, 279
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr4:31136410-31136812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 15
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr4:39231867-39231464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 239
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr4:42424144-42423748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 27
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr4:46477282-46476889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr4:61897876-61897478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
51, 91
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr4:8947054-8947457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
42, 146
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr4:21392141-21391750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 51
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr4:33433600-33433194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 71
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr4:3132939-3133323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
121, 62
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr4:41602532-41602915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
55, 71
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr4:16602399-16601996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
15, 109
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr4:21257470-21257058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
140, 59
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr4:23853861-23854247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 33
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr4:4185777-4186189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
50, 70
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr4:19313661-19314085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr4:3850213-3850631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 53
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr4:24744759-24744320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 110
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr4:28377989-28377580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 56
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr4:49001645-49001214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 318
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr4:21064689-21065123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
59, 111
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr4:17112222-17111783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 276
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr4:53763459-53763035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
106, 51
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr4:59871161-59871568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 69
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr4:24002313-24001870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 209
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr4:54190764-54191186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
118, 30
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr4:16339933-16339508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 59
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr4:20583-21017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
54, 42
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr4:1374050-1374464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 67
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr4:12591554-12591109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 29
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr4:12697300-12697739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 109
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr4:19306912-19307359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr4:20328056-20327603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 59
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr4:27276887-27276438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 322
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr4:45918689-45919139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr4:49794338-49794765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr4:2609898-2610326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 51
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr4:10837705-10837276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 136
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr4:23311604-23311164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
54, 318
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr4:25906670-25906234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 108
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr4:25972555-25973003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 310
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr4:27997339-27997794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 230
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr4:44665713-44665266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 314
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr4:59888946-59888515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
67, 47
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr4:63459559-63459116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 15
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr4:1495745-1495300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
54, 82
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr4:21531973-21531535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
19, 41
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr4:32260191-32259734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 309
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr4:44782030-44782483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 304
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr4:27755649-27755192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
58, 71
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr4:41301344-41300889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
54, 363
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr4:51783827-51784289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
34, 203
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr4:15904757-15905211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 70
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr4:28836188-28836643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
54, 308
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr4:38935035-38935469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
60, 15
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr4:65816036-65815597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 181
               

               
Conread position:
               
1-436
               

               
Cow position:
               
chr4:12560683-12561150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
53, 14
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr4:3421302-3421735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 101
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr4:34383694-34383227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
59, 148
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr4:20090911-20090484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
54, 63
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr4:45644657-45644199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
54, 308
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr4:33097302-33096861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
214, 14
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr4:19141952-19142259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
142, 42
               

               
Conread position:
               
2-384
               

               
Cow position:
               
chr4:7964991-7964591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
143, 58
               

               
Conread position:
               
2-384
               

               
Cow position:
               
chr4:11193842-11194242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
140, 58
               

               
Conread position:
               
2-385
               

               
Cow position:
               
chr4:14470911-14470512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 104
               

               
Conread position:
               
2-445
               

               
Cow position:
               
chr4:25983895-25984334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
106, 58
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr4:22236817-22236556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr4:10016924-10016631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
119, 57
               

               
Conread position:
               
3-438
               

               
Cow position:
               
chr4:53100464-53100916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 108
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chr4:52017191-52016983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
51, 102
               

               
Conread position:
               
4-217
               

               
Cow position:
               
chr4:10993885-10993669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
56, 74
               

               
Conread position:
               
4-255
               

               
Cow position:
               
chr4:33564531-33564773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
49, 80
               

               
Conread position:
               
4-256
               

               
Cow position:
               
chr4:30574115-30574375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
4-291
               

               
Cow position:
               
chr4:39646359-39646649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
51, 145
               

               
Conread position:
               
4-365
               

               
Cow position:
               
chr4:38181352-38181726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 74
               

               
Conread position:
               
4-366
               

               
Cow position:
               
chr4:53208898-53209277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
51, 96
               

               
Conread position:
               
4-384
               

               
Cow position:
               
chr4:42672830-42673233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 44
               

               
Conread position:
               
4-410
               

               
Cow position:
               
chr4:6653399-6653809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
51, 90
               

               
Conread position:
               
4-419
               

               
Cow position:
               
chr4:62772278-62771826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
37, 327
               

               
Conread position:
               
4-430
               

               
Cow position:
               
chr4:36893015-36893465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 56
               

               
Conread position:
               
4-430
               

               
Cow position:
               
chr4:65406698-65406269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 52
               

               
Conread position:
               
4-431
               

               
Cow position:
               
chr4:242885-243337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 99
               

               
Conread position:
               
4-431
               

               
Cow position:
               
chr4:65842091-65841661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 44
               

               
Conread position:
               
5-218
               

               
Cow position:
               
chr4:14812863-14812647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
50, 31
               

               
Conread position:
               
5-256
               

               
Cow position:
               
chr4:42232328-42232582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
50, 93
               

               
Conread position:
               
5-256
               

               
Cow position:
               
chr4:61391541-61391280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
5-383
               

               
Cow position:
               
chr4:53134283-53134652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
141, 29
               

               
Conread position:
               
5-384
               

               
Cow position:
               
chr4:43148062-43148468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
25, 85
               

               
Conread position:
               
5-388
               

               
Cow position:
               
chr4:4084788-4084388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
65, 193
               

               
Conread position:
               
5-393
               

               
Cow position:
               
chr4:31634885-31634506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
76, 55
               

               
Conread position:
               
5-417
               

               
Cow position:
               
chr4:59333309-59332890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
5-430
               

               
Cow position:
               
chr4:7704649-7704219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
51, 143
               

               
Conread position:
               
5-432
               

               
Cow position:
               
chr4:26400617-26401063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
50, 103
               

               
Conread position:
               
6-344
               

               
Cow position:
               
chr4:58512916-58512544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 108
               

               
Conread position:
               
6-384
               

               
Cow position:
               
chr4:2681029-2681386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
259, 54
               

               
Conread position:
               
6-424
               

               
Cow position:
               
chr4:65650460-65650034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
45, 65
               

               
Conread position:
               
6-431
               

               
Cow position:
               
chr4:10992538-10992095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 67
               

               
Conread position:
               
6-435
               

               
Cow position:
               
chr4:13327293-13326845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
129, 53
               

               
Conread position:
               
7-294
               

               
Cow position:
               
chr4:8649909-8650204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
53, 81
               

               
Conread position:
               
9-256
               

               
Cow position:
               
chr4:2244324-2244062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 127
               

               
Conread position:
               
9-256
               

               
Cow position:
               
chr4:10412045-10412299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
7, 62
               

               
Conread position:
               
9-386
               

               
Cow position:
               
chr4:65919286-65919667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
52, 64
               

               
Conread position:
               
9-410
               

               
Cow position:
               
chr4:23647179-23646775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 237
               

               
Conread position:
               
9-424
               

               
Cow position:
               
chr4:44496050-44496470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 56
               

               
Conread position:
               
9-431
               

               
Cow position:
               
chr4:17379152-17378740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 70
               

               
Conread position:
               
9-431
               

               
Cow position:
               
chr4:45235202-45234766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
63, 217
               

               
Conread position:
               
9-432
               

               
Cow position:
               
chr4:25197833-25197388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
51, 97
               

               
Conread position:
               
9-436
               

               
Cow position:
               
chr4:48485657-48486106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 263
               

               
Conread position:
               
9-442
               

               
Cow position:
               
chr4:25879061-25879508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
44, 56
               

               
Conread position:
               
10-345
               

               
Cow position:
               
chr4:47773966-47773621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 18
               

               
Conread position:
               
10-445
               

               
Cow position:
               
chr4:23382136-23381698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 41
               

               
Conread position:
               
11-294
               

               
Cow position:
               
chr4:18489727-18489416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
44, 303
               

               
Conread position:
               
11-346
               

               
Cow position:
               
chr4:49424511-49424845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
6, 36
               

               
Conread position:
               
11-421
               

               
Cow position:
               
chr4:68764183-68764612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 290
               

               
Conread position:
               
11-429
               

               
Cow position:
               
chr4:23494595-23495026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 99
               

               
Conread position:
               
11-431
               

               
Cow position:
               
chr4:48499498-48499922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
44, 111
               

               
Conread position:
               
11-436
               

               
Cow position:
               
chr4:49629149-49629590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
41, 159
               

               
Conread position:
               
12-389
               

               
Cow position:
               
chr4:28399737-28399356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
13-256
               

               
Cow position:
               
chr4:22010390-22010141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
13-349
               

               
Cow position:
               
chr4:4736705-4737037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
42, 95
               

               
Conread position:
               
13-384
               

               
Cow position:
               
chr4:18255532-18255909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
46, 93
               

               
Conread position:
               
13-431
               

               
Cow position:
               
chr4:25369787-25370211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
130, 47
               

               
Conread position:
               
13-438
               

               
Cow position:
               
chr4:509230-508795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 287
               

               
Conread position:
               
15-350
               

               
Cow position:
               
chr4:22741722-22741392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
46, 103
               

               
Conread position:
               
15-421
               

               
Cow position:
               
chr4:34209696-34210130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
34, 297
               

               
Conread position:
               
15-424
               

               
Cow position:
               
chr4:66256356-66256786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
38, 59
               

               
Conread position:
               
15-435
               

               
Cow position:
               
chr4:43866177-43865748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 37
               

               
Conread position:
               
16-215
               

               
Cow position:
               
chr4:41097587-41097797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
17-215
               

               
Cow position:
               
chr4:56226559-56226767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
17-256
               

               
Cow position:
               
chr4:21064329-21064081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 44
               

               
Conread position:
               
17-384
               

               
Cow position:
               
chr4:22073639-22073267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
38, 91
               

               
Conread position:
               
17-384
               

               
Cow position:
               
chr4:57584554-57584185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 19
               

               
Conread position:
               
17-388
               

               
Cow position:
               
chr4:52748802-52748395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
38, 296
               

               
Conread position:
               
17-431
               

               
Cow position:
               
chr4:9845601-9846019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
127, 35
               

               
Conread position:
               
18-383
               

               
Cow position:
               
chr4:37915656-37915280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 80
               

               
Conread position:
               
19-393
               

               
Cow position:
               
chr4:12048922-12049313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
124, 41
               

               
Conread position:
               
21-311
               

               
Cow position:
               
chr4:61399754-61399456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
37, 90
               

               
Conread position:
               
21-431
               

               
Cow position:
               
chr4:22528711-22528281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 85
               

               
Conread position:
               
21-442
               

               
Cow position:
               
chr4:59833611-59834043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
33, 271
               

               
Conread position:
               
22-261
               

               
Cow position:
               
chr4:42267062-42266822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
163, 38
               

               
Conread position:
               
22-415
               

               
Cow position:
               
chr4:30974014-30974424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
31, 84
               

               
Conread position:
               
24-435
               

               
Cow position:
               
chr4:45738800-45738366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
122, 36
               

               
Conread position:
               
25-433
               

               
Cow position:
               
chr4:19597634-19597215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 82
               

               
Conread position:
               
26-221
               

               
Cow position:
               
chr4:17200961-17201156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
38-431
               

               
Cow position:
               
chr4:961969-961544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
43-212
               

               
Cow position:
               
chr4:52584684-52584504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
53-374
               

               
Cow position:
               
chr4:37828128-37827802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
25, 125
               

               
Conread position:
               
53-430
               

               
Cow position:
               
chr4:23451387-23450988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
90, 142
               

               
Conread position:
               
53-431
               

               
Cow position:
               
chr4:53752226-53752628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
79, 40
               

               
Conread position:
               
54-430
               

               
Cow position:
               
chr4:36730900-36731295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
90, 251
               

               
Conread position:
               
54-432
               

               
Cow position:
               
chr4:51727793-51728187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 250
               

               
Conread position:
               
57-239
               

               
Cow position:
               
chr4:56413440-56413259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 50
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr4:14414630-14414290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
57-404
               

               
Cow position:
               
chr4:21874539-21874882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
12, 77
               

               
Conread position:
               
57-430
               

               
Cow position:
               
chr4:39128244-39128643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
57-430
               

               
Cow position:
               
chr4:56570516-56570912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
25, 50
               

               
Conread position:
               
58-405
               

               
Cow position:
               
chr4:17474151-17474520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
76, 47
               

               
Conread position:
               
60-431
               

               
Cow position:
               
chr4:26373955-26373569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
20, 12
               

               
Conread position:
               
61-384
               

               
Cow position:
               
chr4:2893741-2894088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
62-432
               

               
Cow position:
               
chr4:7571127-7571517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
80, 192
               

               
Conread position:
               
63-392
               

               
Cow position:
               
chr4:58261434-58261085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
79, 42
               

               
Conread position:
               
63-412
               

               
Cow position:
               
chr4:13406427-13406796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 36
               

               
Conread position:
               
63-435
               

               
Cow position:
               
chr4:17052879-17052484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
81, 375
               

               
Conread position:
               
64-343
               

               
Cow position:
               
chr4:20298988-20299291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
6, 155
               

               
Conread position:
               
64-421
               

               
Cow position:
               
chr4:31348475-31348092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
6, 39
               

               
Conread position:
               
66-384
               

               
Cow position:
               
chr4:57721797-57722114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
149, 79
               

               
Conread position:
               
68-289
               

               
Cow position:
               
chr4:48235363-48235602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
75, 228
               

               
Conread position:
               
69-384
               

               
Cow position:
               
chr4:33623443-33623770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
74, 151
               

               
Conread position:
               
69-430
               

               
Cow position:
               
chr4:22115331-22115710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 234
               

               
Conread position:
               
71-256
               

               
Cow position:
               
chr4:19438185-19438378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 176
               

               
Conread position:
               
71-380
               

               
Cow position:
               
chr4:51122784-51123112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
71-393
               

               
Cow position:
               
chr4:6630564-6630227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 305
               

               
Conread position:
               
71-430
               

               
Cow position:
               
chr4:23509312-23509699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 312
               

               
Conread position:
               
71-433
               

               
Cow position:
               
chr4:27529840-27530227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
72, 202
               

               
Conread position:
               
71-433
               

               
Cow position:
               
chr4:28772340-28771958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
74, 108
               

               
Conread position:
               
71-433
               

               
Cow position:
               
chr4:59785043-59785429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
37, 217
               

               
Conread position:
               
72-285
               

               
Cow position:
               
chr4:24415013-24415247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 185
               

               
Conread position:
               
72-345
               

               
Cow position:
               
chr4:1034798-1035069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
155, 33
               

               
Conread position:
               
72-351
               

               
Cow position:
               
chr4:5999466-5999166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
60, 175
               

               
Conread position:
               
72-385
               

               
Cow position:
               
chr4:29237422-29237112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
63, 92
               

               
Conread position:
               
72-385
               

               
Cow position:
               
chr4:33395960-33395640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
72-415
               

               
Cow position:
               
chr4:6792170-6792529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
73, 33
               

               
Conread position:
               
72-429
               

               
Cow position:
               
chr4:5461125-5460757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
72-430
               

               
Cow position:
               
chr4:29805630-29805268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
95, 20
               

               
Conread position:
               
72-430
               

               
Cow position:
               
chr4:40623354-40622996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 10
               

               
Conread position:
               
72-439
               

               
Cow position:
               
chr4:46060674-46061056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
73, 222
               

               
Conread position:
               
72-445
               

               
Cow position:
               
chr4:47348560-47348947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
82, 62
               

               
Conread position:
               
73-430
               

               
Cow position:
               
chr4:41867173-41867541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
70, 219
               

               
Conread position:
               
74-434
               

               
Cow position:
               
chr4:23445321-23444937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
75-421
               

               
Cow position:
               
chr4:3283718-3283350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 125
               

               
Conread position:
               
77-302
               

               
Cow position:
               
chr4:62411607-62411856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
77-363
               

               
Cow position:
               
chr4:63119498-63119203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
134, 91
               

               
Conread position:
               
77-364
               

               
Cow position:
               
chr4:51014851-51015125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
77-388
               

               
Cow position:
               
chr4:46550117-46550442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
68, 164
               

               
Conread position:
               
77-412
               

               
Cow position:
               
chr4:33030294-33030637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 34
               

               
Conread position:
               
77-421
               

               
Cow position:
               
chr4:29291255-29291611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
77-429
               

               
Cow position:
               
chr4:46591395-46591772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
66, 28
               

               
Conread position:
               
78-256
               

               
Cow position:
               
chr4:2141480-2141669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
65, 27
               

               
Conread position:
               
78-256
               

               
Cow position:
               
chr4:44073036-44072842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
78-357
               

               
Cow position:
               
chr4:19744623-19744918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
41, 239
               

               
Conread position:
               
78-384
               

               
Cow position:
               
chr4:51739969-51739660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
68, 104
               

               
Conread position:
               
78-388
               

               
Cow position:
               
chr4:34630636-34630960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
92, 27
               

               
Conread position:
               
78-388
               

               
Cow position:
               
chr4:45114872-45114547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
65, 220
               

               
Conread position:
               
78-404
               

               
Cow position:
               
chr4:69509031-69509375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 140
               

               
Conread position:
               
78-415
               

               
Cow position:
               
chr4:36755483-36755830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 119
               

               
Conread position:
               
78-430
               

               
Cow position:
               
chr4:23066034-23065675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
62, 140
               

               
Conread position:
               
78-431
               

               
Cow position:
               
chr4:52225743-52226109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 152
               

               
Conread position:
               
78-433
               

               
Cow position:
               
chr4:44612737-44613110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
78-438
               

               
Cow position:
               
chr4:61624856-61624473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 27
               

               
Conread position:
               
78-439
               

               
Cow position:
               
chr4:23847317-23846937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
64, 118
               

               
Conread position:
               
78-439
               

               
Cow position:
               
chr4:34337528-34337160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 100
               

               
Conread position:
               
78-441
               

               
Cow position:
               
chr4:46456313-46455952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
143, 27
               

               
Conread position:
               
79-337
               

               
Cow position:
               
chr4:46597118-46597389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
76, 26
               

               
Conread position:
               
79-349
               

               
Cow position:
               
chr4:27561131-27561419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
65, 220
               

               
Conread position:
               
79-408
               

               
Cow position:
               
chr4:33612628-33612277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
63, 221
               

               
Conread position:
               
79-431
               

               
Cow position:
               
chr4:21365149-21365508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
80-384
               

               
Cow position:
               
chr4:37691572-37691255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
74, 211
               

               
Conread position:
               
80-388
               

               
Cow position:
               
chr4:63349739-63349423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
31, 110
               

               
Conread position:
               
80-418
               

               
Cow position:
               
chr4:55395504-55395855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
75, 106
               

               
Conread position:
               
80-430
               

               
Cow position:
               
chr4:35471068-35471423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
28, 179
               

               
Conread position:
               
80-431
               

               
Cow position:
               
chr4:5797703-5798072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 197
               

               
Conread position:
               
80-431
               

               
Cow position:
               
chr4:20279076-20279434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 25
               

               
Conread position:
               
80-431
               

               
Cow position:
               
chr4:22249707-22249343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 22
               

               
Conread position:
               
80-431
               

               
Cow position:
               
chr4:40823379-40823006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
80-442
               

               
Cow position:
               
chr4:395686-396049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
134, 65
               

               
Conread position:
               
80-442
               

               
Cow position:
               
chr4:25889097-25888717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
54, 260
               

               
Conread position:
               
81-262
               

               
Cow position:
               
chr4:10471960-10472151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 181
               

               
Conread position:
               
81-424
               

               
Cow position:
               
chr4:68795568-68795194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
61, 24
               

               
Conread position:
               
81-431
               

               
Cow position:
               
chr4:36813109-36813484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
81-431
               

               
Cow position:
               
chr4:54146738-54146361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 133
               

               
Conread position:
               
81-431
               

               
Cow position:
               
chr4:66548016-66547661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
136, 64
               

               
Conread position:
               
82-393
               

               
Cow position:
               
chr4:8597935-8597627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
132, 23
               

               
Conread position:
               
82-431
               

               
Cow position:
               
chr4:46083158-46082800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
33, 207
               

               
Conread position:
               
82-438
               

               
Cow position:
               
chr4:35869953-35870319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 94
               

               
Conread position:
               
83-381
               

               
Cow position:
               
chr4:1985388-1985701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 63
               

               
Conread position:
               
83-418
               

               
Cow position:
               
chr4:63096336-63095980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
59, 146
               

               
Conread position:
               
84-384
               

               
Cow position:
               
chr4:21371140-21371448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 21
               

               
Conread position:
               
85-256
               

               
Cow position:
               
chr4:2536574-2536755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
85-431
               

               
Cow position:
               
chr4:24187877-24187496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
57, 178
               

               
Conread position:
               
87-443
               

               
Cow position:
               
chr4:12676556-12676914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
58, 18
               

               
Conread position:
               
89-387
               

               
Cow position:
               
chr4:58433466-58433159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
54, 170
               

               
Conread position:
               
89-404
               

               
Cow position:
               
chr4:59008624-59008275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
56, 16
               

               
Conread position:
               
89-430
               

               
Cow position:
               
chr4:20157668-20157311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
18, 106
               

               
Conread position:
               
89-433
               

               
Cow position:
               
chr4:45583383-45583014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
54, 276
               

               
Conread position:
               
89-445
               

               
Cow position:
               
chr4:3837024-3837396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
52, 211
               

               
Conread position:
               
90-298
               

               
Cow position:
               
chr4:40410374-40410153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
53, 106
               

               
Conread position:
               
90-337
               

               
Cow position:
               
chr4:33357677-33357946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 217
               

               
Conread position:
               
90-396
               

               
Cow position:
               
chr4:42922100-42921790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
76, 199
               

               
Conread position:
               
90-430
               

               
Cow position:
               
chr4:18439827-18439464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 111
               

               
Conread position:
               
93-384
               

               
Cow position:
               
chr4:13255845-13256139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
93-431
               

               
Cow position:
               
chr4:2121647-2121293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
47, 213
               

               
Conread position:
               
95-352
               

               
Cow position:
               
chr4:44025067-44024792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
47, 180
               

               
Conread position:
               
95-379
               

               
Cow position:
               
chr4:3440157-3440453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
55, 124
               

               
Conread position:
               
95-435
               

               
Cow position:
               
chr4:19322328-19321967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
60, 211
               

               
Conread position:
               
97-393
               

               
Cow position:
               
chr4:21233118-21232807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
102-337
               

               
Cow position:
               
chr4:65538650-65538407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
117, 65
               

               
Conread position:
               
102-351
               

               
Cow position:
               
chr4:51408205-51407945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
64, 133
               

               
Conread position:
               
105-433
               

               
Cow position:
               
chr4:26659066-26659409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
36, 204
               

               
Conread position:
               
106-371
               

               
Cow position:
               
chr4:13871691-13871944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
54, 46
               

               
Conread position:
               
110-285
               

               
Cow position:
               
chr4:41908026-41907843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
33, 159
               

               
Conread position:
               
120-393
               

               
Cow position:
               
chr4:44973418-44973701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
46, 171
               

               
Conread position:
               
120-434
               

               
Cow position:
               
chr4:22860930-22860601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
25, 29
               

               
Conread position:
               
138-433
               

               
Cow position:
               
chr4:59377715-59378018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
28, 159
               

               
Conread position:
               
141-431
               

               
Cow position:
               
chr4:68634769-68635055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
75, 154
               

               
Conread position:
               
143-285
               

               
Cow position:
               
chr4:3689515-3689663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
17, 135
               

               
Conread position:
               
143-384
               

               
Cow position:
               
chr4:25359415-25359655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
18, 120
               

               
Conread position:
               
143-388
               

               
Cow position:
               
chr4:27344864-27344619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
143-411
               

               
Cow position:
               
chr4:62618330-62618603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
111, 43
               

               
Conread position:
               
143-429
               

               
Cow position:
               
chr4:16593890-16594187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
17, 76
               

               
Conread position:
               
144-286
               

               
Cow position:
               
chr4:33869468-33869620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
144-337
               

               
Cow position:
               
chr4:34924880-34924680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
75, 156
               

               
Conread position:
               
144-378
               

               
Cow position:
               
chr4:123388-123159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 97
               

               
Conread position:
               
144-384
               

               
Cow position:
               
chr4:29106712-29106964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 155
               

               
Conread position:
               
144-387
               

               
Cow position:
               
chr4:5623389-5623141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
71, 148
               

               
Conread position:
               
144-393
               

               
Cow position:
               
chr4:58881154-58880894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
84, 129
               

               
Conread position:
               
144-394
               

               
Cow position:
               
chr4:38944452-38944190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
81, 157
               

               
Conread position:
               
144-433
               

               
Cow position:
               
chr4:21259024-21259321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
17, 198
               

               
Conread position:
               
144-439
               

               
Cow position:
               
chr4:59277667-59277365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
85, 139
               

               
Conread position:
               
144-445
               

               
Cow position:
               
chr4:43515535-43515836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
84, 116
               

               
Conread position:
               
146-383
               

               
Cow position:
               
chr4:35791284-35791062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
6, 21
               

               
Conread position:
               
151-432
               

               
Cow position:
               
chr4:28839440-28839725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
7, 138
               

               
Conread position:
               
152-337
               

               
Cow position:
               
chr4:27687739-27687937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
152-433
               

               
Cow position:
               
chr4:13974156-13973861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
8, 273
               

               
Conread position:
               
153-283
               

               
Cow position:
               
chr4:26541556-26541700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
153-350
               

               
Cow position:
               
chr4:9912550-9912753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
105, 151
               

               
Conread position:
               
153-384
               

               
Cow position:
               
chr4:31506214-31505967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
153-385
               

               
Cow position:
               
chr4:44676014-44676251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
81, 215
               

               
Conread position:
               
153-391
               

               
Cow position:
               
chr4:11331910-11332162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
81, 150
               

               
Conread position:
               
153-421
               

               
Cow position:
               
chr4:36929135-36929406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 141
               

               
Conread position:
               
153-431
               

               
Cow position:
               
chr4:39767167-39767455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 205
               

               
Conread position:
               
153-431
               

               
Cow position:
               
chr4:48961662-48961381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 142
               

               
Conread position:
               
153-431
               

               
Cow position:
               
chr4:50769946-50769659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 12
               

               
Conread position:
               
153-435
               

               
Cow position:
               
chr4:1026407-1026126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
76, 97
               

               
Conread position:
               
158-383
               

               
Cow position:
               
chr4:15784986-15784753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 137
               

               
Conread position:
               
158-400
               

               
Cow position:
               
chr4:14550673-14550913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
75, 113
               

               
Conread position:
               
158-430
               

               
Cow position:
               
chr4:13344369-13344643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
70, 97
               

               
Conread position:
               
158-431
               

               
Cow position:
               
chr4:5553966-5553690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
59, 142
               

               
Conread position:
               
158-431
               

               
Cow position:
               
chr4:27372032-27371757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
100, 59
               

               
Conread position:
               
158-433
               

               
Cow position:
               
chr4:13941282-13941565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 190
               

               
Conread position:
               
158-436
               

               
Cow position:
               
chr4:51768935-51769215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
62, 101
               

               
Conread position:
               
159-431
               

               
Cow position:
               
chr4:22235168-22235433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
5, 29
               

               
Conread position:
               
159-438
               

               
Cow position:
               
chr4:45952546-45952275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 104
               

               
Conread position:
               
162-385
               

               
Cow position:
               
chr4:48321851-48322094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
162-434
               

               
Cow position:
               
chr4:45685296-45685565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 8
               

               
Conread position:
               
165-410
               

               
Cow position:
               
chr4:34369623-34369363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
52, 114
               

               
Conread position:
               
165-431
               

               
Cow position:
               
chr4:21073323-21073049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
52, 137
               

               
Conread position:
               
166-334
               

               
Cow position:
               
chr4:36190710-36190866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
166-369
               

               
Cow position:
               
chr4:21517174-21516961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 140
               

               
Conread position:
               
166-389
               

               
Cow position:
               
chr4:41154475-41154704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
51, 191
               

               
Conread position:
               
166-424
               

               
Cow position:
               
chr4:58858332-58858069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
50, 11
               

               
Conread position:
               
166-431
               

               
Cow position:
               
chr4:20147016-20147290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
166-431
               

               
Cow position:
               
chr4:23758635-23758909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 176
               

               
Conread position:
               
166-431
               

               
Cow position:
               
chr4:30671574-30671309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
166-431
               

               
Cow position:
               
chr4:36945361-36945088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
92, 52
               

               
Conread position:
               
166-442
               

               
Cow position:
               
chr4:9681128-9681422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
22, 195
               

               
Conread position:
               
167-431
               

               
Cow position:
               
chr4:31172506-31172778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 163
               

               
Conread position:
               
168-431
               

               
Cow position:
               
chr4:9547809-9548058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 129
               

               
Conread position:
               
168-431
               

               
Cow position:
               
chr4:23166737-23167008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 77
               

               
Conread position:
               
168-436
               

               
Cow position:
               
chr4:10378941-10379221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 156
               

               
Conread position:
               
169-429
               

               
Cow position:
               
chr4:30131179-30131439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 139
               

               
Conread position:
               
169-430
               

               
Cow position:
               
chr4:6208300-6208565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
170-341
               

               
Cow position:
               
chr4:63418089-63417907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 120
               

               
Conread position:
               
170-384
               

               
Cow position:
               
chr4:45711204-45711420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 61
               

               
Conread position:
               
170-421
               

               
Cow position:
               
chr4:19501249-19500995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
58, 112
               

               
Conread position:
               
170-431
               

               
Cow position:
               
chr4:53616670-53616933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
50, 110
               

               
Conread position:
               
171-344
               

               
Cow position:
               
chr4:63784286-63784103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 128
               

               
Conread position:
               
172-384
               

               
Cow position:
               
chr4:47041587-47041372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 60
               

               
Conread position:
               
177-434
               

               
Cow position:
               
chr4:20027259-20026994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 118
               

               
Conread position:
               
178-431
               

               
Cow position:
               
chr4:51605765-51605507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 119
               

               
Conread position:
               
178-431
               

               
Cow position:
               
chr4:52087778-52088032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
56, 114
               

               
Conread position:
               
186-431
               

               
Cow position:
               
chr4:37880783-37881041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
189-329
               

               
Cow position:
               
chr4:45116207-45116055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
189-431
               

               
Cow position:
               
chr4:24497963-24497723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
25, 102
               

               
Conread position:
               
190-430
               

               
Cow position:
               
chr4:18756288-18756540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 233
               

               
Conread position:
               
195-434
               

               
Cow position:
               
chr4:2597006-2596764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
75, 33
               

               
Conread position:
               
202-431
               

               
Cow position:
               
chr4:5913482-5913240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
20, 102
               

               
Conread position:
               
202-431
               

               
Cow position:
               
chr4:20066354-20066115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
11, 210
               

               
Conread position:
               
204-400
               

               
Cow position:
               
chr4:33667073-33667269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
54, 92
               

               
Conread position:
               
209-431
               

               
Cow position:
               
chr4:6166429-6166202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
16, 149
               

               
Conread position:
               
210-431
               

               
Cow position:
               
chr4:30759-30532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 107
               

               
Conread position:
               
213-429
               

               
Cow position:
               
chr4:21250146-21249923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
45, 62
               

               
Conread position:
               
213-438
               

               
Cow position:
               
chr4:5580436-5580671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
221-435
               

               
Cow position:
               
chr4:12995859-12996066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
223-431
               

               
Cow position:
               
chr4:40434007-40433796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
25, 71
               

               
Conread position:
               
225-431
               

               
Cow position:
               
chr4:28065852-28065639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
33, 160
               

               
Conread position:
               
225-431
               

               
Cow position:
               
chr4:60030804-60031009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
225-437
               

               
Cow position:
               
chr4:29709871-29709654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 69
               

               
Conread position:
               
244-431
               

               
Cow position:
               
chr4:5002683-5002868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
149, 37
               

               
Conread position:
               
244-431
               

               
Cow position:
               
chr4:19729179-19728998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
156, 41
               

               
Conread position:
               
244-433
               

               
Cow position:
               
chr4:19102965-19102773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 70
               

               
Conread position:
               
244-440
               

               
Cow position:
               
chr4:13026222-13026417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
142, 85
               

               
Conread position:
               
246-429
               

               
Cow position:
               
chr4:48283359-48283183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
35, 100
               

               
Conread position:
               
254-429
               

               
Cow position:
               
chr4:3267934-3267761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
142, 38
               

               
Conread position:
               
259-431
               

               
Cow position:
               
chr4:37035300-37035129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
134, 32
               

               
Conread position:
               
269-431
               

               
Cow position:
               
chr4:1799852-1800012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
131, 69
               

               
Conread position:
               
278-392
               

               
Cow position:
               
chr4:38877713-38877824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
288-431
               

               
Cow position:
               
chr4:65604507-65604367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
112, 21
               

               
Conread position:
               
294-427
               

               
Cow position:
               
chr4:45871899-45871763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
294-429
               

               
Cow position:
               
chr4:44279969-44279832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
294-432
               

               
Cow position:
               
chr4:17304426-17304287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
108, 66
               
Show alignments to all cow chromosomes.