Cow genome map

Conread name: rcte16_d7.y1

Conread position: 1-207
Cow position: chr6:7801662-7801446 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 105

Conread position: 1-213
Cow position: chr6:26837681-26837460 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 116, 33

Conread position: 1-213
Cow position: chr6:38987970-38987750 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 63

Conread position: 1-214
Cow position: chr6:54357672-54357448 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 106

Conread position: 1-216
Cow position: chr6:22877451-22877233 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 58, 77

Conread position: 1-220
Cow position: chr6:12845013-12845242 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 48, 112

Conread position: 1-220
Cow position: chr6:13741401-13741627 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 144, 74

Conread position: 1-225
Cow position: chr6:23003698-23003474 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 139, 32

Conread position: 1-225
Cow position: chr6:60467731-60467961 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 54, 105

Conread position: 1-246
Cow position: chr6:10649315-10649063 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 191
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 50, 121

Conread position: 1-247
Cow position: chr6:31688677-31688430 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 41

Conread position: 1-252
Cow position: chr6:11638037-11637785 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 153, 48

Conread position: 1-252
Cow position: chr6:24327432-24327174 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 117

Conread position: 1-256
Cow position: chr6:1886944-1886693 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 69

Conread position: 1-256
Cow position: chr6:2012722-2012990 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 1-256
Cow position: chr6:9733127-9732872 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 54, 29

Conread position: 1-256
Cow position: chr6:12623174-12623441 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 54, 117

Conread position: 1-256
Cow position: chr6:32210926-32210657 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 34, 108

Conread position: 1-256
Cow position: chr6:46205721-46205986 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 192
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 54, 108

Conread position: 1-256
Cow position: chr6:46666809-46667083 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 54, 90

Conread position: 1-257
Cow position: chr6:25358780-25359046 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 52, 0

Conread position: 1-257
Cow position: chr6:57474083-57474350 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 1-274
Cow position: chr6:5958312-5958029 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 217
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 59, 30

Conread position: 1-288
Cow position: chr6:12934436-12934125 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 217
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 107, 302

Conread position: 1-291
Cow position: chr6:6187968-6188248 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 145, 30

Conread position: 1-307
Cow position: chr6:60152739-60153065 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 62, 313

Conread position: 1-329
Cow position: chr6:20231122-20230777 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 247
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 54, 122

Conread position: 1-331
Cow position: chr6:53345499-53345841 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 232
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 282

Conread position: 1-332
Cow position: chr6:58172891-58173237 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 242
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 141, 59

Conread position: 1-336
Cow position: chr6:23987034-23986689 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 243
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 20, 108

Conread position: 1-344
Cow position: chr6:34075730-34076093 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 254
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 43

Conread position: 1-346
Cow position: chr6:24652477-24652128 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 250
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 47, 76

Conread position: 1-348
Cow position: chr6:54806926-54807295 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 69

Conread position: 1-349
Cow position: chr6:58315750-58316118 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 261
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 52, 104

Conread position: 1-353
Cow position: chr6:50446056-50445695 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 259
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 47, 105

Conread position: 1-370
Cow position: chr6:606965-607353 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 272
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 62, 285

Conread position: 1-372
Cow position: chr6:11192749-11192372 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 267
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 54, 155

Conread position: 1-372
Cow position: chr6:24961870-24962237 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 255
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 75, 15

Conread position: 1-373
Cow position: chr6:8804840-8804438 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 273
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 41, 124

Conread position: 1-376
Cow position: chr6:1944433-1944809 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 257
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 53, 113

Conread position: 1-377
Cow position: chr6:52556768-52556383 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 59

Conread position: 1-381
Cow position: chr6:53401074-53401458 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 71

Conread position: 1-382
Cow position: chr6:48169648-48170040 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 267
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 47, 267

Conread position: 1-383
Cow position: chr6:11169411-11169804 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 269
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 54, 105

Conread position: 1-384
Cow position: chr6:12337688-12338097 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 105

Conread position: 1-384
Cow position: chr6:16699965-16700365 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 57

Conread position: 1-384
Cow position: chr6:24031078-24031480 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 280
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 58, 293

Conread position: 1-384
Cow position: chr6:44078219-44078618 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 281
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 54, 111

Conread position: 1-384
Cow position: chr6:51071407-51071812 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 276
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 54, 111

Conread position: 1-384
Cow position: chr6:63272914-63272507 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 276
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 59, 109

Conread position: 1-387
Cow position: chr6:25784016-25784421 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 274
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 54, 257

Conread position: 1-387
Cow position: chr6:46292627-46292241 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 268
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 81

Conread position: 1-387
Cow position: chr6:46529117-46529487 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 260
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 279, 109

Conread position: 1-388
Cow position: chr6:29077432-29077843 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 284
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 68, 33

Conread position: 1-388
Cow position: chr6:47305031-47305449 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 291
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 52, 92

Conread position: 1-388
Cow position: chr6:54140521-54140906 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 269
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 165, 59

Conread position: 1-393
Cow position: chr6:12387617-12387224 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 289
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 54, 77

Conread position: 1-393
Cow position: chr6:49627057-49627453 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 265
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 54, 229

Conread position: 1-399
Cow position: chr6:11789105-11789508 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 210

Conread position: 1-404
Cow position: chr6:39093466-39093878 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 275
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 93

Conread position: 1-404
Cow position: chr6:45596821-45596407 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 284
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 80, 52

Conread position: 1-410
Cow position: chr6:56842863-56843288 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 296
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 52, 102

Conread position: 1-417
Cow position: chr6:16518153-16517742 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 281
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 54, 147

Conread position: 1-421
Cow position: chr6:4864835-4864403 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 285
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 54, 77

Conread position: 1-421
Cow position: chr6:18049322-18048883 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 102

Conread position: 1-421
Cow position: chr6:33852080-33851657 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 109

Conread position: 1-421
Cow position: chr6:36470862-36470418 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 108

Conread position: 1-426
Cow position: chr6:8562419-8562867 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 307

Conread position: 1-429
Cow position: chr6:15938161-15937703 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 322
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 59, 144

Conread position: 1-430
Cow position: chr6:13367004-13367438 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 303
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 59, 25

Conread position: 1-430
Cow position: chr6:20255677-20255254 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 51

Conread position: 1-430
Cow position: chr6:25407703-25407239 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 301
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 297

Conread position: 1-430
Cow position: chr6:52002073-52002507 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 270

Conread position: 1-431
Cow position: chr6:827978-827554 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 312
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 54, 66

Conread position: 1-431
Cow position: chr6:8318462-8318013 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 123

Conread position: 1-431
Cow position: chr6:16625651-16626103 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 105

Conread position: 1-431
Cow position: chr6:19427153-19427604 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 59

Conread position: 1-431
Cow position: chr6:24583532-24583078 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 322
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 59, 21

Conread position: 1-431
Cow position: chr6:28476881-28477322 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 291
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 62, 271

Conread position: 1-431
Cow position: chr6:44372235-44371787 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 29

Conread position: 1-431
Cow position: chr6:46557761-46558211 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 296
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 42, 94

Conread position: 1-431
Cow position: chr6:48807285-48806855 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 297
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 106, 17

Conread position: 1-431
Cow position: chr6:55474953-55475409 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 97

Conread position: 1-431
Cow position: chr6:63197464-63197009 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 310
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 51, 33

Conread position: 1-431
Cow position: chr6:65871621-65872042 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 109

Conread position: 1-431
Cow position: chr6:67214445-67214903 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 105

Conread position: 1-432
Cow position: chr6:6343131-6343585 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 35

Conread position: 1-432
Cow position: chr6:16675529-16675964 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 50

Conread position: 1-432
Cow position: chr6:17414750-17414290 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 312
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 54, 300

Conread position: 1-433
Cow position: chr6:33302114-33302548 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 293
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 59, 43

Conread position: 1-433
Cow position: chr6:64431645-64432094 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 51

Conread position: 1-435
Cow position: chr6:611270-611704 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 74

Conread position: 1-435
Cow position: chr6:10176595-10176146 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 57

Conread position: 1-435
Cow position: chr6:15305292-15305726 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 59

Conread position: 1-435
Cow position: chr6:40031897-40032346 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 105

Conread position: 1-435
Cow position: chr6:44510938-44511394 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 321

Conread position: 1-435
Cow position: chr6:49398914-49398462 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 270

Conread position: 1-436
Cow position: chr6:36195917-36196365 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 329

Conread position: 1-437
Cow position: chr6:9008904-9008452 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 71

Conread position: 1-439
Cow position: chr6:17090296-17090760 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 311
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 46, 107

Conread position: 1-439
Cow position: chr6:18583089-18582654 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 63

Conread position: 1-442
Cow position: chr6:35181549-35181092 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 42

Conread position: 1-443
Cow position: chr6:55842457-55841998 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 322
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 105

Conread position: 2-213
Cow position: chr6:11704902-11705124 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 75

Conread position: 2-224
Cow position: chr6:6167107-6167334 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 53, 86

Conread position: 2-432
Cow position: chr6:12550972-12551425 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 104

Conread position: 2-434
Cow position: chr6:8209881-8209449 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 302
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 152, 58

Conread position: 3-256
Cow position: chr6:40264488-40264229 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 26

Conread position: 3-323
Cow position: chr6:54647818-54647492 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 235
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 52, 269

Conread position: 3-386
Cow position: chr6:38900053-38899666 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 258
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 52, 234

Conread position: 3-394
Cow position: chr6:32121616-32122022 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 298

Conread position: 3-433
Cow position: chr6:54867217-54867673 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 193

Conread position: 3-435
Cow position: chr6:47519756-47520211 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 296
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 52, 300

Conread position: 4-238
Cow position: chr6:68297874-68297630 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 128, 47

Conread position: 4-378
Cow position: chr6:1770489-1770100 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 241

Conread position: 4-393
Cow position: chr6:57685865-57686263 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 237

Conread position: 4-399
Cow position: chr6:28084307-28083902 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 288
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 64, 44

Conread position: 4-421
Cow position: chr6:38771004-38771424 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 288
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 75, 40

Conread position: 4-424
Cow position: chr6:6060851-6060425 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 182

Conread position: 4-433
Cow position: chr6:45690903-45690454 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 310
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 118

Conread position: 4-434
Cow position: chr6:2546949-2547412 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 304
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 51, 105

Conread position: 4-439
Cow position: chr6:2366418-2365952 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 308
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 264

Conread position: 5-386
Cow position: chr6:10422872-10423274 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 267
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 26, 230

Conread position: 5-393
Cow position: chr6:32867499-32867105 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 258

Conread position: 5-410
Cow position: chr6:58073750-58074181 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 359

Conread position: 5-414
Cow position: chr6:60057958-60057517 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 307
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 50, 260

Conread position: 5-433
Cow position: chr6:19681809-19681369 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 67

Conread position: 5-433
Cow position: chr6:53933142-53932692 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 305
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 28, 192

Conread position: 6-384
Cow position: chr6:34196440-34196046 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 256
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 54, 170

Conread position: 6-393
Cow position: chr6:60931195-60930783 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 286
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 32, 55

Conread position: 6-429
Cow position: chr6:6943969-6943529 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 64

Conread position: 6-433
Cow position: chr6:5095846-5095386 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 316
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 49, 311

Conread position: 6-433
Cow position: chr6:66532094-66531668 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 308
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 46, 101

Conread position: 7-352
Cow position: chr6:6721829-6722177 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 235
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 146, 53

Conread position: 7-413
Cow position: chr6:456889-457307 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 291
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 25, 106

Conread position: 9-209
Cow position: chr6:37331678-37331882 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 28, 44

Conread position: 9-377
Cow position: chr6:62925281-62924899 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 271
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 46, 13

Conread position: 9-384
Cow position: chr6:18987928-18988312 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 268
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 46, 97

Conread position: 9-388
Cow position: chr6:65870735-65871145 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 283
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 46, 0

Conread position: 9-413
Cow position: chr6:28811284-28810862 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 116

Conread position: 9-429
Cow position: chr6:37644287-37644696 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 278
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 157, 43

Conread position: 9-431
Cow position: chr6:34549120-34549550 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 233

Conread position: 9-431
Cow position: chr6:36652141-36652575 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 25

Conread position: 9-435
Cow position: chr6:24004258-24004694 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 299
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 47, 110

Conread position: 9-435
Cow position: chr6:24781852-24781404 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 317
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 46, 97

Conread position: 10-207
Cow position: chr6:15046382-15046175 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 43, 20

Conread position: 10-333
Cow position: chr6:47625247-47624908 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 102

Conread position: 10-377
Cow position: chr6:54369184-54368807 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 48

Conread position: 10-431
Cow position: chr6:24649566-24649998 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 60

Conread position: 11-435
Cow position: chr6:6201161-6201580 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 298
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 125, 49

Conread position: 12-256
Cow position: chr6:55688755-55689012 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 55

Conread position: 12-355
Cow position: chr6:17248446-17248793 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 230
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 230

Conread position: 12-424
Cow position: chr6:57164141-57164572 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 304
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 109

Conread position: 12-430
Cow position: chr6:16634495-16634074 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 286
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 109, 83

Conread position: 12-431
Cow position: chr6:4022819-4023255 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 297
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 10, 61

Conread position: 13-256
Cow position: chr6:23695713-23695965 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 42, 93

Conread position: 13-427
Cow position: chr6:17534784-17534368 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 282
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 132, 42

Conread position: 13-431
Cow position: chr6:51387481-51387903 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 59

Conread position: 14-432
Cow position: chr6:47026195-47026633 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 295
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 47, 19

Conread position: 16-256
Cow position: chr6:57411361-57411604 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 93

Conread position: 16-385
Cow position: chr6:61515481-61515083 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 273
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 13, 92

Conread position: 17-363
Cow position: chr6:14850991-14850631 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 214
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 124, 81

Conread position: 17-429
Cow position: chr6:21534778-21535191 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 251

Conread position: 18-430
Cow position: chr6:57119207-57118789 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 114

Conread position: 22-307
Cow position: chr6:32337134-32337415 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 33, 68

Conread position: 23-435
Cow position: chr6:42961642-42961207 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 288
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 40, 248

Conread position: 25-288
Cow position: chr6:47150506-47150775 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 219

Conread position: 25-385
Cow position: chr6:54365596-54365223 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 270
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 23, 94

Conread position: 26-382
Cow position: chr6:48281723-48282094 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 262
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 29, 241

Conread position: 33-225
Cow position: chr6:35769747-35769545 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 37-377
Cow position: chr6:32677330-32676985 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 241
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 21, 30

Conread position: 41-421
Cow position: chr6:5609696-5609303 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 265
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 16, 41

Conread position: 53-384
Cow position: chr6:31535816-31535465 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 239
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 18, 54

Conread position: 53-385
Cow position: chr6:54132575-54132918 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 89, 9

Conread position: 53-433
Cow position: chr6:15242592-15242992 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 279
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 90, 36

Conread position: 53-434
Cow position: chr6:1002478-1002107 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 264
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 38

Conread position: 53-435
Cow position: chr6:38853902-38853501 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 267
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 90, 219

Conread position: 54-434
Cow position: chr6:37611907-37612262 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 271
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 158, 17

Conread position: 56-389
Cow position: chr6:3929081-3929428 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 236
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 76, 14

Conread position: 57-215
Cow position: chr6:54479407-54479577 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 57-269
Cow position: chr6:40138945-40138724 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 103, 0

Conread position: 58-393
Cow position: chr6:20098203-20097845 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 247
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 85, 272

Conread position: 60-348
Cow position: chr6:24631328-24631037 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 210

Conread position: 60-384
Cow position: chr6:54600131-54600452 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 224
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 14, 46

Conread position: 63-288
Cow position: chr6:1891079-1890834 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 42

Conread position: 64-256
Cow position: chr6:54885146-54884939 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 64-367
Cow position: chr6:38614590-38614906 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 230
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 6, 116

Conread position: 64-431
Cow position: chr6:2582641-2583013 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 36

Conread position: 66-433
Cow position: chr6:34475774-34475405 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 241
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 122

Conread position: 69-248
Cow position: chr6:59302054-59301857 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 69-445
Cow position: chr6:64436558-64436164 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 267
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 76, 188

Conread position: 71-334
Cow position: chr6:49685359-49685639 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 190
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 73, 239

Conread position: 71-384
Cow position: chr6:130390-130059 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 233
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 72, 34

Conread position: 71-384
Cow position: chr6:24468618-24468292 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 222
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 51, 226

Conread position: 71-384
Cow position: chr6:66874136-66874455 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 227
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 163, 84

Conread position: 71-412
Cow position: chr6:47327294-47326938 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 255
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 37, 236

Conread position: 71-430
Cow position: chr6:56376571-56376196 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 11

Conread position: 71-433
Cow position: chr6:21869871-21869493 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 247
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 102

Conread position: 72-298
Cow position: chr6:9322934-9323167 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 70, 163

Conread position: 72-384
Cow position: chr6:29239718-29240043 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 221
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 37, 232

Conread position: 72-385
Cow position: chr6:16103427-16103092 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 227
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 241

Conread position: 72-394
Cow position: chr6:67950734-67951064 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 229
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 94, 176

Conread position: 72-410
Cow position: chr6:42617663-42618014 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 246
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 43, 15

Conread position: 73-248
Cow position: chr6:51398577-51398764 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 73-256
Cow position: chr6:388947-389141 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 73-352
Cow position: chr6:7824539-7824838 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 224
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 73, 27

Conread position: 73-420
Cow position: chr6:38018050-38018404 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 243
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 42, 50

Conread position: 74-393
Cow position: chr6:13592488-13592822 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 233
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 69, 11

Conread position: 74-435
Cow position: chr6:46860390-46860010 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 250
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 31

Conread position: 75-429
Cow position: chr6:10254020-10254377 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 251
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 17

Conread position: 77-255
Cow position: chr6:7694573-7694378 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 28

Conread position: 77-384
Cow position: chr6:6063499-6063190 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 201
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 144, 77

Conread position: 77-388
Cow position: chr6:38207715-38207381 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 239
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 69, 28

Conread position: 77-393
Cow position: chr6:23248183-23247852 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 232
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 66, 217

Conread position: 77-394
Cow position: chr6:4383273-4383594 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 217
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 89, 28

Conread position: 77-418
Cow position: chr6:7190339-7189980 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 260
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 66, 132

Conread position: 77-431
Cow position: chr6:48573102-48572726 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 22

Conread position: 77-432
Cow position: chr6:55282509-55282138 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 248
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 73, 28

Conread position: 77-445
Cow position: chr6:68049216-68049585 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 266
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 66, 28

Conread position: 78-232
Cow position: chr6:34031449-34031607 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 78-248
Cow position: chr6:10635958-10636128 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 43, 27

Conread position: 78-302
Cow position: chr6:5462267-5462036 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 77, 27

Conread position: 78-331
Cow position: chr6:14289553-14289303 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 66, 155

Conread position: 78-337
Cow position: chr6:56041841-56041566 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 117

Conread position: 78-342
Cow position: chr6:1907320-1907604 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 30, 277

Conread position: 78-368
Cow position: chr6:3118416-3118105 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 218
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 123

Conread position: 78-384
Cow position: chr6:16746121-16746447 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 220
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 66, 250

Conread position: 78-385
Cow position: chr6:66433729-66434054 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 216
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 220

Conread position: 78-393
Cow position: chr6:899503-899179 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 213
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 65, 182

Conread position: 78-401
Cow position: chr6:35415740-35415394 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 27

Conread position: 78-405
Cow position: chr6:35613628-35613289 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 234
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 65, 27

Conread position: 78-411
Cow position: chr6:30474112-30474462 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 117

Conread position: 78-420
Cow position: chr6:15301036-15300689 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 248
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 65, 220

Conread position: 78-421
Cow position: chr6:44194764-44194406 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 243
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 65, 232

Conread position: 78-424
Cow position: chr6:54490959-54490590 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 260
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 67, 233

Conread position: 78-430
Cow position: chr6:6731045-6731412 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 259
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 67, 231

Conread position: 78-431
Cow position: chr6:6596363-6596724 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 253
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 60, 24

Conread position: 78-431
Cow position: chr6:9026298-9026673 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 232

Conread position: 78-432
Cow position: chr6:36202609-36202974 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 251
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 58, 199

Conread position: 78-438
Cow position: chr6:45065225-45064856 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 252
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 60, 217

Conread position: 78-442
Cow position: chr6:28977250-28976875 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 344

Conread position: 78-445
Cow position: chr6:35435784-35436162 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 269
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 24, 32

Conread position: 79-424
Cow position: chr6:21737102-21736746 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 12, 121

Conread position: 79-431
Cow position: chr6:31425781-31425404 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 65, 256

Conread position: 80-302
Cow position: chr6:17669093-17669318 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 137, 64

Conread position: 80-328
Cow position: chr6:48344111-48344381 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 63, 241

Conread position: 80-338
Cow position: chr6:25773598-25773327 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 80-431
Cow position: chr6:24623174-24622820 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 51

Conread position: 80-434
Cow position: chr6:8965873-8966253 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 261
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 63, 32

Conread position: 81-431
Cow position: chr6:24223377-24223005 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 263
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 35, 235

Conread position: 81-433
Cow position: chr6:53460787-53460411 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 245
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 24

Conread position: 82-440
Cow position: chr6:17997530-17997158 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 259
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 63, 187

Conread position: 83-392
Cow position: chr6:68112700-68112390 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 211
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 59, 39

Conread position: 84-434
Cow position: chr6:31564546-31564181 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 259
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 32, 11

Conread position: 85-293
Cow position: chr6:24515405-24515180 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 85-372
Cow position: chr6:57405336-57405033 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 37

Conread position: 89-384
Cow position: chr6:7989621-7989311 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 204

Conread position: 89-422
Cow position: chr6:21231329-21231666 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 227
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 5

Conread position: 89-430
Cow position: chr6:28080105-28079761 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 236
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 54, 181

Conread position: 89-433
Cow position: chr6:54864874-54864504 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 252
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 16

Conread position: 90-346
Cow position: chr6:56902657-56902930 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 54, 133

Conread position: 90-429
Cow position: chr6:6367869-6367520 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 245
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 18, 112

Conread position: 90-431
Cow position: chr6:4079590-4079245 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 242
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 210

Conread position: 90-431
Cow position: chr6:50271301-50270958 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 54, 178

Conread position: 91-410
Cow position: chr6:38641292-38641626 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 230
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 64, 264

Conread position: 93-345
Cow position: chr6:45793699-45793953 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 61

Conread position: 93-441
Cow position: chr6:51463820-51463472 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 240
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 148

Conread position: 94-353
Cow position: chr6:48425524-48425251 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 180
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 95-433
Cow position: chr6:10400097-10399759 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 229
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 71, 140

Conread position: 98-431
Cow position: chr6:6995146-6994805 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 125

Conread position: 102-354
Cow position: chr6:3545509-3545769 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 155, 127

Conread position: 102-437
Cow position: chr6:12652011-12652362 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 250
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 41, 211

Conread position: 102-442
Cow position: chr6:42566673-42567019 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 195

Conread position: 103-433
Cow position: chr6:37149000-37149345 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 233
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 63, 12

Conread position: 109-409
Cow position: chr6:47799110-47799426 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 55, 196

Conread position: 141-387
Cow position: chr6:48442430-48442678 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 108

Conread position: 141-416
Cow position: chr6:39158107-39157840 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 18, 47

Conread position: 143-385
Cow position: chr6:12543079-12542825 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 143-421
Cow position: chr6:47640578-47640291 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 194
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 93, 144

Conread position: 143-429
Cow position: chr6:19446114-19446402 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 84, 149

Conread position: 143-442
Cow position: chr6:46283144-46282841 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 195
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 84, 22

Conread position: 144-384
Cow position: chr6:57571333-57571583 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 153

Conread position: 144-431
Cow position: chr6:58590134-58590426 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 191
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 81, 162

Conread position: 144-432
Cow position: chr6:35993437-35993738 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 79, 158

Conread position: 144-435
Cow position: chr6:16316166-16316472 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 217
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 41

Conread position: 144-439
Cow position: chr6:5114187-5113894 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 207
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 84, 21

Conread position: 144-439
Cow position: chr6:26450177-26450474 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 114, 87

Conread position: 144-445
Cow position: chr6:528417-528116 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 202
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 86, 74

Conread position: 146-420
Cow position: chr6:47204335-47204612 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 66, 19

Conread position: 146-431
Cow position: chr6:54144163-54144456 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 167

Conread position: 150-384
Cow position: chr6:54036274-54036039 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 153
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 10, 80

Conread position: 150-436
Cow position: chr6:11246625-11246925 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 201
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 200

Conread position: 151-430
Cow position: chr6:37739048-37739327 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 10, 115

Conread position: 153-345
Cow position: chr6:57680566-57680371 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 12, 82

Conread position: 153-346
Cow position: chr6:22968946-22969149 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 64, 150

Conread position: 153-381
Cow position: chr6:16423568-16423803 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 35

Conread position: 153-385
Cow position: chr6:21399888-21399651 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 140

Conread position: 153-388
Cow position: chr6:15243121-15243364 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 153-392
Cow position: chr6:50822103-50822342 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 139, 56

Conread position: 153-394
Cow position: chr6:61608376-61608627 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 134

Conread position: 153-410
Cow position: chr6:8788168-8787903 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 29

Conread position: 153-413
Cow position: chr6:65947219-65946946 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 199
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 78, 157

Conread position: 153-418
Cow position: chr6:55892631-55892906 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 47, 141

Conread position: 153-422
Cow position: chr6:47616744-47616465 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 159

Conread position: 153-429
Cow position: chr6:15782656-15782363 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 69, 35

Conread position: 153-429
Cow position: chr6:36194456-36194747 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 232

Conread position: 153-430
Cow position: chr6:30160188-30160471 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 172

Conread position: 153-431
Cow position: chr6:32276799-32277099 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 74, 0

Conread position: 153-431
Cow position: chr6:41264991-41265264 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 190
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 71, 141

Conread position: 153-431
Cow position: chr6:59249812-59249546 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 247, 58

Conread position: 153-432
Cow position: chr6:17313599-17313888 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 75, 140

Conread position: 153-433
Cow position: chr6:21234909-21235199 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 77, 0

Conread position: 153-433
Cow position: chr6:59069759-59069464 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 207
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 75, 139

Conread position: 153-435
Cow position: chr6:50984093-50984377 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 192
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 68, 29

Conread position: 153-435
Cow position: chr6:51840135-51840436 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 64, 0

Conread position: 153-438
Cow position: chr6:14658474-14658766 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 103, 33

Conread position: 158-371
Cow position: chr6:12829352-12829134 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 100, 25

Conread position: 158-413
Cow position: chr6:59508230-59508486 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 76, 12

Conread position: 158-431
Cow position: chr6:47574775-47575060 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 158-440
Cow position: chr6:60667291-60667573 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 190
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 24

Conread position: 158-445
Cow position: chr6:60739885-60740182 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 63, 263

Conread position: 159-384
Cow position: chr6:62669745-62669969 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 55, 24

Conread position: 160-430
Cow position: chr6:7173881-7173600 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 68, 253

Conread position: 160-431
Cow position: chr6:38453910-38453628 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 62, 205

Conread position: 162-430
Cow position: chr6:30973925-30974189 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 185
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 17, 121

Conread position: 165-404
Cow position: chr6:19292676-19292928 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 57, 15

Conread position: 166-393
Cow position: chr6:7119732-7119505 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 154
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 73, 118

Conread position: 166-431
Cow position: chr6:53673741-53674017 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 17

Conread position: 170-392
Cow position: chr6:54032130-54032339 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 143, 26

Conread position: 170-431
Cow position: chr6:32412729-32412486 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 224, 20

Conread position: 170-433
Cow position: chr6:582389-582117 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 58, 41

Conread position: 171-430
Cow position: chr6:58331771-58332041 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 12, 136

Conread position: 172-393
Cow position: chr6:58597620-58597392 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 178-398
Cow position: chr6:25086853-25086639 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 41, 80

Conread position: 178-445
Cow position: chr6:59603317-59603040 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 181
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 48, 124

Conread position: 179-429
Cow position: chr6:15997324-15997066 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 6, 187

Conread position: 180-431
Cow position: chr6:38914343-38914594 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 67, 42

Conread position: 183-434
Cow position: chr6:36645283-36645543 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 194
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 63

Conread position: 183-444
Cow position: chr6:26043647-26043905 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 84

Conread position: 187-424
Cow position: chr6:20196394-20196156 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 42

Conread position: 187-427
Cow position: chr6:61218131-61217881 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 44, 172

Conread position: 187-431
Cow position: chr6:24545513-24545767 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 188-425
Cow position: chr6:56860449-56860697 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 29, 105

Conread position: 188-438
Cow position: chr6:52901134-52901399 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 168

Conread position: 189-431
Cow position: chr6:4164268-4164020 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 27, 118

Conread position: 189-431
Cow position: chr6:50034820-50034576 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 6

Conread position: 191-393
Cow position: chr6:51486321-51486528 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 107

Conread position: 192-431
Cow position: chr6:20754382-20754148 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 99, 35

Conread position: 193-431
Cow position: chr6:41678994-41679234 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 217

Conread position: 194-430
Cow position: chr6:35775078-35774830 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 197-432
Cow position: chr6:10487496-10487740 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 104

Conread position: 198-430
Cow position: chr6:59588497-59588256 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 19, 159

Conread position: 202-424
Cow position: chr6:37462936-37463169 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 32, 220

Conread position: 204-431
Cow position: chr6:3078432-3078654 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 16, 148

Conread position: 211-429
Cow position: chr6:16733340-16733566 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 28, 139

Conread position: 212-431
Cow position: chr6:33929626-33929393 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 17, 213

Conread position: 214-384
Cow position: chr6:37395474-37395297 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 215-386
Cow position: chr6:59633064-59633243 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 83

Conread position: 215-429
Cow position: chr6:40722-40500 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 111

Conread position: 218-430
Cow position: chr6:24557815-24558031 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 40, 135

Conread position: 223-429
Cow position: chr6:54479214-54478999 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 35, 94

Conread position: 242-431
Cow position: chr6:13718724-13718917 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 153
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 8, 53

Conread position: 244-430
Cow position: chr6:510331-510151 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 165, 43

Conread position: 244-431
Cow position: chr6:7835883-7836068 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 158, 105

Conread position: 244-431
Cow position: chr6:51294250-51294439 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 130, 42

Conread position: 244-431
Cow position: chr6:54062629-54062814 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 144, 48

Conread position: 245-431
Cow position: chr6:32798905-32798719 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 52, 101

Conread position: 247-431
Cow position: chr6:47858258-47858437 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 168, 98

Conread position: 254-430
Cow position: chr6:9454267-9454437 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 147, 36

Conread position: 258-431
Cow position: chr6:34235433-34235261 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 141, 79

Conread position: 259-430
Cow position: chr6:30701425-30701594 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 127, 77

Conread position: 261-431
Cow position: chr6:2899589-2899412 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 262-444
Cow position: chr6:50318056-50317878 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 137, 19

Conread position: 264-424
Cow position: chr6:60503365-60503524 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 29

Conread position: 274-431
Cow position: chr6:64427217-64427378 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 276-431
Cow position: chr6:46676429-46676277 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 281-432
Cow position: chr6:1890575-1890424 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 115, 34

Conread position: 286-441
Cow position: chr6:12421284-12421126 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 29

Conread position: 290-430
Cow position: chr6:18469216-18469080 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 6, 56

Conread position: 292-431
Cow position: chr6:59496231-59496372 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 25, 90

Conread position: 292-438
Cow position: chr6:52705565-52705418 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 319-431
Cow position: chr6:47192485-47192372 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 81, 101

Show alignments to all cow chromosomes.