Cow genome map
| Conread name: | rcte17_l11.y1 |
| Conread position: | 1-226 |
| Cow position: | chr16:45678004-45677774 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 62, 103 |
| Conread position: | 1-350 |
| Cow position: | chr16:23729898-23730262 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 271 |
| Conread position: | 1-350 |
| Cow position: | chr16:52790081-52789740 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 96 |
| Conread position: | 9-289 |
| Cow position: | chr16:23033869-23033604 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 48, 122 |
| Conread position: | 9-301 |
| Cow position: | chr16:39417102-39417384 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 92, 54 |
| Conread position: | 10-262 |
| Cow position: | chr16:25839637-25839380 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 214 |
| Conread position: | 10-267 |
| Cow position: | chr16:35168747-35168482 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 10-291 |
| Cow position: | chr16:18402704-18402429 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 58, 165 |
| Conread position: | 10-348 |
| Cow position: | chr16:33508070-33507743 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 38 |
| Conread position: | 10-350 |
| Cow position: | chr16:37669720-37670068 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 91, 171 |
| Conread position: | 12-251 |
| Cow position: | chr16:43105500-43105739 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 89, 36 |
| Conread position: | 12-262 |
| Cow position: | chr16:13232934-13233182 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 57, 46 |
| Conread position: | 12-278 |
| Cow position: | chr16:26372934-26373205 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 56, 42 |
| Conread position: | 12-293 |
| Cow position: | chr16:24672342-24672628 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 227 |
| Conread position: | 12-343 |
| Cow position: | chr16:13611439-13611772 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 47 |
| Conread position: | 12-350 |
| Cow position: | chr16:11791028-11790675 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 70 |
| Conread position: | 12-350 |
| Cow position: | chr16:18141311-18141652 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 48, 150 |
| Conread position: | 12-350 |
| Cow position: | chr16:19643903-19643569 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 157 |
| Conread position: | 12-350 |
| Cow position: | chr16:33226523-33226857 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 170 |
| Conread position: | 12-350 |
| Cow position: | chr16:51500947-51500607 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 91, 68 |
| Conread position: | 12-355 |
| Cow position: | chr16:4712915-4712570 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 42 |
| Conread position: | 12-355 |
| Cow position: | chr16:7542304-7541960 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 250 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 40, 164 |
| Conread position: | 13-350 |
| Cow position: | chr16:54579181-54578846 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 112 |
| Conread position: | 14-208 |
| Cow position: | chr16:17288960-17288758 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 31, 180 |
| Conread position: | 15-243 |
| Cow position: | chr16:54679681-54679449 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 45, 64 |
| Conread position: | 17-350 |
| Cow position: | chr16:31159562-31159896 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 34 |
Show alignments to all cow chromosomes.