Cow genome map


           Conread name:
           rcte17_l11.y1
        

               Conread position:
               9-215
               

               Cow position:
               chr29:32211051-32211251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               83, 36
               

               Conread position:
               9-345
               

               Cow position:
               chr29:6774980-6775312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               54, 65
               

               Conread position:
               10-284
               

               Cow position:
               chr29:44236467-44236207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               46, 99
               

               Conread position:
               12-279
               

               Cow position:
               chr29:8926449-8926715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               39, 123
               

               Conread position:
               12-286
               

               Cow position:
               chr29:29302646-29302917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               57, 73
               

               Conread position:
               12-291
               

               Cow position:
               chr29:356333-356058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               57, 92
               

               Conread position:
               12-347
               

               Cow position:
               chr29:26778895-26778567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 90
               

               Conread position:
               13-275
               

               Cow position:
               chr29:1556942-1556680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               88, 22
               

               Conread position:
               13-350
               

               Cow position:
               chr29:732632-732299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               243
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               32, 121
               

               Conread position:
               14-292
               

               Cow position:
               chr29:2984901-2984618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               56, 173
               

               Conread position:
               14-350
               

               Cow position:
               chr29:26615710-26616063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 169
               

               Conread position:
               19-223
               

               Cow position:
               chr29:10818429-10818636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               29, 40
               
Show alignments to all cow chromosomes.