Cow genome map
| Conread name: | rcte17_l11.y1 |
| Conread position: | 1-277 |
| Cow position: | chr5:8820961-8821239 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 65, 100 |
| Conread position: | 4-192 |
| Cow position: | chr5:56877529-56877343 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 97, 61 |
| Conread position: | 9-350 |
| Cow position: | chr5:34638927-34638593 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 121 |
| Conread position: | 12-217 |
| Cow position: | chr5:30629119-30629324 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 86, 79 |
| Conread position: | 12-221 |
| Cow position: | chr5:56014771-56014564 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 50, 91 |
| Conread position: | 12-244 |
| Cow position: | chr5:22643186-22643411 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 137, 42 |
| Conread position: | 12-265 |
| Cow position: | chr5:60126413-60126158 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 193 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 12-349 |
| Cow position: | chr5:50637866-50637533 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 36 |
| Conread position: | 12-350 |
| Cow position: | chr5:32696782-32697097 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 251 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 57, 117 |
| Conread position: | 12-350 |
| Cow position: | chr5:55068746-55068421 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 130, 110 |
| Conread position: | 12-350 |
| Cow position: | chr5:57935068-57935413 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 290 |
| Conread position: | 12-351 |
| Cow position: | chr5:45845651-45845994 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 116 |
| Conread position: | 12-355 |
| Cow position: | chr5:62172452-62172101 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 57 |
| Conread position: | 13-350 |
| Cow position: | chr5:29828085-29827753 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 38 |
| Conread position: | 13-350 |
| Cow position: | chr5:50821822-50821488 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 195 |
| Conread position: | 16-350 |
| Cow position: | chr5:64321790-64321450 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 117 |
Show alignments to all cow chromosomes.