Cow genome map

Conread name: rcte39_n4.y1

Conread position: 1-133
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 1-184
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 165, 46

Conread position: 1-192
Cow position:
Alignm length: 196
Alignm identity: 148
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 68, 53

Conread position: 1-199
Cow position:
Alignm length: 201
Alignm identity: 150
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 126, 53

Conread position: 1-199
Cow position:
Alignm length: 199
Alignm identity: 151
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 1-199
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 117, 53

Conread position: 1-217
Cow position:
Alignm length: 217
Alignm identity: 166
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 42, 0

Conread position: 1-221
Cow position:
Alignm length: 221
Alignm identity: 160
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-226
Cow position:
Alignm length: 228
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 46

Conread position: 1-233
Cow position:
Alignm length: 233
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-234
Cow position:
Alignm length: 234
Alignm identity: 167
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 1-240
Cow position:
Alignm length: 251
Alignm identity: 184
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 169, 42

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 170
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 182
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 9, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 172
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-242
Cow position:
Alignm length: 242
Alignm identity: 187
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 38, 0

Conread position: 1-251
Cow position:
Alignm length: 251
Alignm identity: 176
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 178
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-252
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 148, 53

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 177
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 189
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 24, 0

Conread position: 1-252
Cow position:
Alignm length: 255
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 47

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 54, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 183, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 42, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 180
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 126, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 183
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 73, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 188
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 174
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 53

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 224, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 166, 53

Conread position: 1-254
Cow position:
Alignm length: 254
Alignm identity: 185
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-254
Cow position:
Alignm length: 254
Alignm identity: 186
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 1-255
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 165, 42

Conread position: 1-255
Cow position:
Alignm length: 256
Alignm identity: 186
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 126, 53

Conread position: 1-255
Cow position:
Alignm length: 256
Alignm identity: 190
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 180, 35

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 184
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 42, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 186
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 182
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 258
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 42

Conread position: 1-256
Cow position:
Alignm length: 260
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 42

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 179
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position:
Alignm length: 258
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 42

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 190
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 52, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 176
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 260
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 17

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 1-257
Cow position:
Alignm length: 257
Alignm identity: 185
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 1-257
Cow position:
Alignm length: 257
Alignm identity: 183
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 2-132
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 2-170
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 2-191
Cow position:
Alignm length: 190
Alignm identity: 148
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 45, 0

Conread position: 2-199
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 52, 0

Conread position: 2-217
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 2-221
Cow position:
Alignm length: 220
Alignm identity: 169
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 2-230
Cow position:
Alignm length: 231
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 71

Conread position: 2-241
Cow position:
Alignm length: 240
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-250
Cow position:
Alignm length: 249
Alignm identity: 189
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 44, 0

Conread position: 2-252
Cow position:
Alignm length: 251
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 2-252
Cow position:
Alignm length: 251
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 2-252
Cow position:
Alignm length: 254
Alignm identity: 185
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 177, 44

Conread position: 2-253
Cow position:
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 41

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 2-253
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 120, 40

Conread position: 2-254
Cow position:
Alignm length: 254
Alignm identity: 186
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 60, 52

Conread position: 2-255
Cow position:
Alignm length: 254
Alignm identity: 189
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 42, 0

Conread position: 2-255
Cow position:
Alignm length: 254
Alignm identity: 188
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 14, 0

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-256
Cow position:
Alignm length: 264
Alignm identity: 191
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 210, 52

Conread position: 2-256
Cow position:
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 45

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 39

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 187
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 44, 0

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 188
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 109, 52

Conread position: 2-257
Cow position:
Alignm length: 256
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 2-257
Cow position:
Alignm length: 258
Alignm identity: 187
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 69, 45

Conread position: 2-257
Cow position:
Alignm length: 263
Alignm identity: 198
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 73, 44

Conread position: 2-257
Cow position:
Alignm length: 256
Alignm identity: 188
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 41, 0

Conread position: 3-235
Cow position:
Alignm length: 233
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 172
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 70, 0

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 180
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 51, 0

Conread position: 3-253
Cow position:
Alignm length: 255
Alignm identity: 187
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 199, 22

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 177
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 3-253
Cow position:
Alignm length: 252
Alignm identity: 175
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 115, 43

Conread position: 3-253
Cow position:
Alignm length: 252
Alignm identity: 174
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 146, 51

Conread position: 3-253
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 168, 22

Conread position: 4-256
Cow position:
Alignm length: 253
Alignm identity: 192
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 12, 0

Conread position: 4-256
Cow position:
Alignm length: 254
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 50

Conread position: 5-255
Cow position:
Alignm length: 251
Alignm identity: 183
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 5-256
Cow position:
Alignm length: 252
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 8-186
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 154, 46

Conread position: 8-252
Cow position:
Alignm length: 247
Alignm identity: 186
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 167, 39

Conread position: 14-256
Cow position:
Alignm length: 244
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 40

Conread position: 14-257
Cow position:
Alignm length: 244
Alignm identity: 182
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 40, 0

Conread position: 16-257
Cow position:
Alignm length: 247
Alignm identity: 188
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 111, 31

Conread position: 19-241
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 22, 0

Conread position: 22-255
Cow position:
Alignm length: 234
Alignm identity: 178
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 25, 0

Conread position: 29-203
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 95, 7

Conread position: 44-192
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 48-224
Cow position:
Alignm length: 177
Alignm identity: 147
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 33, 0

Conread position: 57-257
Cow position:
Alignm length: 201
Alignm identity: 161
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 30, 0

Conread position: 60-241
Cow position:
Alignm length: 183
Alignm identity: 143
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 103, 21

Conread position: 68-241
Cow position:
Alignm length: 177
Alignm identity: 141
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 12, 151

Conread position: 79-253
Cow position:
Alignm length: 175
Alignm identity: 145
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.