Cow genome map

Conread name: rcte39_n4.y1

Conread position: 1-139
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 1-184
Cow position:
Alignm length: 185
Alignm identity: 152
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 44, 73

Conread position: 1-186
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 1-192
Cow position:
Alignm length: 192
Alignm identity: 152
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 1-198
Cow position:
Alignm length: 198
Alignm identity: 143
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 1-199
Cow position:
Alignm length: 200
Alignm identity: 148
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 61, 53

Conread position: 1-213
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 1-217
Cow position:
Alignm length: 218
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 9

Conread position: 1-232
Cow position:
Alignm length: 233
Alignm identity: 167
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 101, 42

Conread position: 1-235
Cow position:
Alignm length: 235
Alignm identity: 172
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 42, 0

Conread position: 1-241
Cow position:
Alignm length: 242
Alignm identity: 175
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 207, 46

Conread position: 1-242
Cow position:
Alignm length: 242
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-242
Cow position:
Alignm length: 243
Alignm identity: 177
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 220, 36

Conread position: 1-249
Cow position:
Alignm length: 249
Alignm identity: 172
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 1-250
Cow position:
Alignm length: 250
Alignm identity: 176
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 15, 0

Conread position: 1-251
Cow position:
Alignm length: 251
Alignm identity: 181
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-251
Cow position:
Alignm length: 251
Alignm identity: 181
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 176
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 181
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-252
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 207, 53

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 182
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 175
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 89, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 117, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 174
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 129, 51

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 255
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 175
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 224, 53

Conread position: 1-253
Cow position:
Alignm length: 256
Alignm identity: 182
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 162, 42

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 42, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 260
Alignm identity: 183
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 123, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 1-253
Cow position:
Alignm length: 256
Alignm identity: 185
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 36, 72

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 255
Alignm identity: 186
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 102, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 51, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 186
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 206, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 180
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 166, 21

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 15

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 47

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 166, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-255
Cow position:
Alignm length: 255
Alignm identity: 185
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-255
Cow position:
Alignm length: 255
Alignm identity: 181
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 265
Alignm identity: 193
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 170, 45

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 185
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 257
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 205, 53

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 188
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 265
Alignm identity: 197
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 174, 39

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 258
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 42

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 259
Alignm identity: 187
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 75, 53

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 184
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 42, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 257
Alignm identity: 186
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 110, 53

Conread position: 1-256
Cow position:
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 84

Conread position: 1-257
Cow position:
Alignm length: 257
Alignm identity: 187
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-257
Cow position:
Alignm length: 257
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-257
Cow position:
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 2-166
Cow position:
Alignm length: 165
Alignm identity: 128
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 2-226
Cow position:
Alignm length: 226
Alignm identity: 168
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 182, 23

Conread position: 2-248
Cow position:
Alignm length: 247
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 2-252
Cow position:
Alignm length: 251
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 46, 0

Conread position: 2-252
Cow position:
Alignm length: 251
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 52, 0

Conread position: 2-253
Cow position:
Alignm length: 254
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 44

Conread position: 2-255
Cow position:
Alignm length: 254
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-255
Cow position:
Alignm length: 255
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 41

Conread position: 2-256
Cow position:
Alignm length: 256
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 14

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-256
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 212, 52

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 198
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 191, 41

Conread position: 2-256
Cow position:
Alignm length: 256
Alignm identity: 178
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 185, 44

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 186
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 8, 0

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 2-257
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 43

Conread position: 3-220
Cow position:
Alignm length: 219
Alignm identity: 162
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 12, 52

Conread position: 3-252
Cow position:
Alignm length: 255
Alignm identity: 190
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 41, 83

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 179
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 51, 0

Conread position: 3-253
Cow position:
Alignm length: 252
Alignm identity: 185
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 164, 51

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 177
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 51, 0

Conread position: 3-256
Cow position:
Alignm length: 255
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 51

Conread position: 3-257
Cow position:
Alignm length: 256
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 43

Conread position: 3-257
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 38, 52

Conread position: 4-257
Cow position:
Alignm length: 254
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 5-253
Cow position:
Alignm length: 249
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 5-253
Cow position:
Alignm length: 249
Alignm identity: 175
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 49, 0

Conread position: 5-254
Cow position:
Alignm length: 250
Alignm identity: 176
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 42, 0

Conread position: 5-256
Cow position:
Alignm length: 252
Alignm identity: 187
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 42, 0

Conread position: 6-253
Cow position:
Alignm length: 252
Alignm identity: 191
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 200, 48

Conread position: 13-192
Cow position:
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 13-256
Cow position:
Alignm length: 244
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 18-253
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 19-256
Cow position:
Alignm length: 238
Alignm identity: 180
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 54, 0

Conread position: 22-256
Cow position:
Alignm length: 240
Alignm identity: 184
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 88, 51

Conread position: 22-256
Cow position:
Alignm length: 236
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 25

Conread position: 48-201
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 139, 33

Conread position: 79-255
Cow position:
Alignm length: 179
Alignm identity: 136
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 68, 0

Conread position: 95-250
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 72, 65

Conread position: 101-253
Cow position:
Alignm length: 153
Alignm identity: 126
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.