Cow genome map
Conread name: | rcte39_n4.y1 |
Conread position: | 1-150 |
Cow position: | chr12:42232523-42232668 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 118 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-180 |
Cow position: | chr12:18936042-18936217 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 134 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-184 |
Cow position: | chr12:1408031-1408210 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 130 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-188 |
Cow position: | chr12:27929578-27929395 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 136 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-204 |
Cow position: | chr12:39283304-39283104 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 160 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 117, 42 |
Conread position: | 1-215 |
Cow position: | chr12:42856317-42856108 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 149 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-226 |
Cow position: | chr12:2242774-2242556 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 163 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 1-230 |
Cow position: | chr12:9988473-9988249 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 166 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 17, 47 |
Conread position: | 1-241 |
Cow position: | chr12:25148405-25148169 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 174 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-241 |
Cow position: | chr12:33296846-33297079 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 179 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 1-241 |
Cow position: | chr12:36213491-36213727 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 176 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-241 |
Cow position: | chr12:46111904-46111668 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 175 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-251 |
Cow position: | chr12:28571597-28571835 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 190 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 1-252 |
Cow position: | chr12:1476448-1476202 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 176 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-252 |
Cow position: | chr12:21904572-21904817 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-252 |
Cow position: | chr12:27994314-27994561 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 187 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr12:1511550-1511304 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 176 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr12:3180622-3180870 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 179 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr12:3717060-3716812 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 183 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr12:5226447-5226695 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 178 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr12:10931298-10931547 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 187 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 218, 43 |
Conread position: | 1-253 |
Cow position: | chr12:12928693-12928449 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 179 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 1-253 |
Cow position: | chr12:14568601-14568363 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 173 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr12:18585886-18586134 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 185 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr12:20459506-20459261 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 183 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr12:21211997-21212244 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 174 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr12:21718964-21718711 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 182 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 144, 53 |
Conread position: | 1-253 |
Cow position: | chr12:22202468-22202220 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 182 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr12:22480338-22480586 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 186 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr12:22517639-22517393 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 179 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr12:23138115-23137867 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 174 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr12:25097052-25096806 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 183 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-253 |
Cow position: | chr12:25266120-25265872 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 180 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr12:27506436-27506188 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 183 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr12:28013018-28012770 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 182 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr12:28763800-28763554 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 180 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-253 |
Cow position: | chr12:31261196-31260948 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 183 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr12:32011564-32011316 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 173 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr12:32656762-32657010 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 177 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-253 |
Cow position: | chr12:41338019-41337771 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 183 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr12:42604969-42604723 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 176 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-256 |
Cow position: | chr12:3070071-3070322 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 189 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 178, 35 |
Conread position: | 1-256 |
Cow position: | chr12:25313500-25313249 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 1-256 |
Cow position: | chr12:41973559-41973309 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 181 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-257 |
Cow position: | chr12:8773880-8774129 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 2-210 |
Cow position: | chr12:1173789-1173586 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 155 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 74, 12 |
Conread position: | 2-229 |
Cow position: | chr12:23294449-23294670 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 165 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 2-241 |
Cow position: | chr12:29447021-29447255 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 176 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 2-253 |
Cow position: | chr12:10358910-10359158 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 184 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 205, 52 |
Conread position: | 2-253 |
Cow position: | chr12:12754942-12754696 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 179 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 2-253 |
Cow position: | chr12:13043027-13042780 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 177 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 2-257 |
Cow position: | chr12:1774708-1774449 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 185 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 165, 50 |
Conread position: | 3-218 |
Cow position: | chr12:35311696-35311482 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 152 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 93, 7 |
Conread position: | 3-252 |
Cow position: | chr12:22686712-22686947 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 3-256 |
Cow position: | chr12:1093117-1093364 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 187 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 37, 13 |
Conread position: | 3-256 |
Cow position: | chr12:19871428-19871679 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 189 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 115, 40 |
Conread position: | 3-256 |
Cow position: | chr12:31329114-31328865 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 178 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 3-256 |
Cow position: | chr12:48416531-48416278 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 64 |
Conread position: | 4-253 |
Cow position: | chr12:8172124-8172366 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 178 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 5-252 |
Cow position: | chr12:24557795-24558034 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 6-252 |
Cow position: | chr12:47803391-47803613 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 182 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 6-255 |
Cow position: | chr12:15231253-15231490 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 9-166 |
Cow position: | chr12:41595442-41595596 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 132 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 13-256 |
Cow position: | chr12:2285497-2285733 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 165 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 22-250 |
Cow position: | chr12:6954556-6954774 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 164 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 50-256 |
Cow position: | chr12:1501352-1501545 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 161 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 78-191 |
Cow position: | chr12:42124461-42124574 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 88 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.