Cow genome map

Conread name: rcte39_n4.y1

Conread position: 1-144
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 1-188
Cow position:
Alignm length: 188
Alignm identity: 141
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 1-235
Cow position:
Alignm length: 235
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 1-235
Cow position:
Alignm length: 235
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 1-237
Cow position:
Alignm length: 240
Alignm identity: 178
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 46, 26

Conread position: 1-237
Cow position:
Alignm length: 237
Alignm identity: 174
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 46, 0

Conread position: 1-238
Cow position:
Alignm length: 240
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 53

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 178
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 180
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-242
Cow position:
Alignm length: 242
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 190
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 110, 39

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 63, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 54, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 255
Alignm identity: 173
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 178, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 255
Alignm identity: 189
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 197, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 37, 0

Conread position: 1-254
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-254
Cow position:
Alignm length: 257
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 73

Conread position: 1-255
Cow position:
Alignm length: 256
Alignm identity: 181
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 117, 53

Conread position: 1-255
Cow position:
Alignm length: 255
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-255
Cow position:
Alignm length: 255
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-255
Cow position:
Alignm length: 260
Alignm identity: 175
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 204, 53

Conread position: 1-256
Cow position:
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 37

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 180
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-257
Cow position:
Alignm length: 257
Alignm identity: 185
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 1-257
Cow position:
Alignm length: 258
Alignm identity: 192
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 110, 42

Conread position: 2-166
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 2-192
Cow position:
Alignm length: 191
Alignm identity: 147
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 9, 0

Conread position: 2-208
Cow position:
Alignm length: 207
Alignm identity: 153
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 2-221
Cow position:
Alignm length: 220
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-241
Cow position:
Alignm length: 247
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 40

Conread position: 2-252
Cow position:
Alignm length: 252
Alignm identity: 182
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 186, 61

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 174
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 183
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 179
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 52, 0

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 177
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 52, 0

Conread position: 2-253
Cow position:
Alignm length: 258
Alignm identity: 180
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 178, 52

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 2-255
Cow position:
Alignm length: 258
Alignm identity: 195
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 160, 43

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 185
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 41, 0

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 187
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 72

Conread position: 3-178
Cow position:
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 39, 0

Conread position: 3-181
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 3-186
Cow position:
Alignm length: 184
Alignm identity: 143
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 40, 0

Conread position: 3-189
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 3-211
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 3-252
Cow position:
Alignm length: 251
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 195, 50

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 183
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 52, 0

Conread position: 3-253
Cow position:
Alignm length: 252
Alignm identity: 186
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 135, 34

Conread position: 3-257
Cow position:
Alignm length: 255
Alignm identity: 185
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 40, 0

Conread position: 4-148
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 117, 43

Conread position: 6-248
Cow position:
Alignm length: 244
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 40

Conread position: 10-253
Cow position:
Alignm length: 244
Alignm identity: 181
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 44, 0

Conread position: 13-253
Cow position:
Alignm length: 241
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 26-253
Cow position:
Alignm length: 243
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 45, 21

Conread position: 44-255
Cow position:
Alignm length: 212
Alignm identity: 163
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 29, 0

Conread position: 49-252
Cow position:
Alignm length: 204
Alignm identity: 158
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 32, 0

Conread position: 56-255
Cow position:
Alignm length: 200
Alignm identity: 152
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 33, 0

Show alignments to all cow chromosomes.