Cow genome map

Conread name: rcte39_n4.y1

Conread position: 1-130
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 1-138
Cow position:
Alignm length: 138
Alignm identity: 103
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 54, 0

Conread position: 1-188
Cow position:
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 1-188
Cow position:
Alignm length: 188
Alignm identity: 141
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 1-190
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 134, 54

Conread position: 1-199
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 1-205
Cow position:
Alignm length: 205
Alignm identity: 160
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 1-218
Cow position:
Alignm length: 218
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-218
Cow position:
Alignm length: 218
Alignm identity: 162
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 1-223
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-235
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-239
Cow position:
Alignm length: 239
Alignm identity: 176
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 42, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 178
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 7, 0

Conread position: 1-250
Cow position:
Alignm length: 251
Alignm identity: 184
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 60, 154

Conread position: 1-252
Cow position:
Alignm length: 253
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 178, 53

Conread position: 1-252
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 125, 53

Conread position: 1-252
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 46, 71

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 255
Alignm identity: 183
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 52, 72

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 186
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 199, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-253
Cow position:
Alignm length: 258
Alignm identity: 179
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 121, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 45, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 39, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 41, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 30, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 182, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 182
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 117, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 260
Alignm identity: 180
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 113, 42

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 36, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 54, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 43, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 43, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 184
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 180
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 188
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 2-241
Cow position:
Alignm length: 240
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 2-241
Cow position:
Alignm length: 240
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 2-250
Cow position:
Alignm length: 251
Alignm identity: 178
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 46, 171

Conread position: 2-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 209, 52

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 183
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 181
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 52, 0

Conread position: 2-255
Cow position:
Alignm length: 254
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 2-255
Cow position:
Alignm length: 255
Alignm identity: 179
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 107, 44

Conread position: 2-255
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 44, 0

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 70

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 181
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 2-256
Cow position:
Alignm length: 256
Alignm identity: 177
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 46

Conread position: 2-256
Cow position:
Alignm length: 256
Alignm identity: 179
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 224, 53

Conread position: 2-257
Cow position:
Alignm length: 256
Alignm identity: 184
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 32, 0

Conread position: 2-257
Cow position:
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 74

Conread position: 3-199
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 3-236
Cow position:
Alignm length: 235
Alignm identity: 161
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 100, 38

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 51, 0

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 181
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 51, 0

Conread position: 3-256
Cow position:
Alignm length: 254
Alignm identity: 189
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 51, 0

Conread position: 3-256
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 63

Conread position: 4-232
Cow position:
Alignm length: 229
Alignm identity: 168
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 4-234
Cow position:
Alignm length: 233
Alignm identity: 176
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 114, 50

Conread position: 4-253
Cow position:
Alignm length: 250
Alignm identity: 179
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 50, 0

Conread position: 5-226
Cow position:
Alignm length: 222
Alignm identity: 167
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 41, 0

Conread position: 5-253
Cow position:
Alignm length: 249
Alignm identity: 180
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 42, 0

Conread position: 5-253
Cow position:
Alignm length: 250
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 35

Conread position: 6-239
Cow position:
Alignm length: 234
Alignm identity: 172
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 37, 0

Conread position: 6-256
Cow position:
Alignm length: 255
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 40

Conread position: 7-253
Cow position:
Alignm length: 247
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 10-257
Cow position:
Alignm length: 248
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 13-256
Cow position:
Alignm length: 244
Alignm identity: 180
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 34, 0

Conread position: 13-256
Cow position:
Alignm length: 244
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 18-255
Cow position:
Alignm length: 241
Alignm identity: 172
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 175, 35

Conread position: 21-241
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 27-256
Cow position:
Alignm length: 231
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 45

Conread position: 68-242
Cow position:
Alignm length: 176
Alignm identity: 136
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 21, 35

Conread position: 79-257
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 101-256
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.