Cow genome map

Conread name: rcte39_n4.y1

Conread position: 1-184
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 1-192
Cow position:
Alignm length: 193
Alignm identity: 144
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 149, 42

Conread position: 1-192
Cow position:
Alignm length: 192
Alignm identity: 147
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 42, 0

Conread position: 1-199
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 165, 53

Conread position: 1-200
Cow position:
Alignm length: 200
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-211
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 74, 37

Conread position: 1-217
Cow position:
Alignm length: 217
Alignm identity: 160
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 46, 0

Conread position: 1-226
Cow position:
Alignm length: 226
Alignm identity: 158
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 1-227
Cow position:
Alignm length: 227
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 1-235
Cow position:
Alignm length: 235
Alignm identity: 168
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-235
Cow position:
Alignm length: 238
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 188, 53

Conread position: 1-239
Cow position:
Alignm length: 240
Alignm identity: 170
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 126, 42

Conread position: 1-239
Cow position:
Alignm length: 239
Alignm identity: 176
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 47, 0

Conread position: 1-240
Cow position:
Alignm length: 240
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-240
Cow position:
Alignm length: 241
Alignm identity: 165
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 232, 53

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 175
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 1-241
Cow position:
Alignm length: 250
Alignm identity: 184
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 150, 42

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 167
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 181
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 42, 0

Conread position: 1-248
Cow position:
Alignm length: 250
Alignm identity: 178
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 218, 53

Conread position: 1-250
Cow position:
Alignm length: 250
Alignm identity: 177
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-250
Cow position:
Alignm length: 250
Alignm identity: 180
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 42, 0

Conread position: 1-251
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 159, 45

Conread position: 1-251
Cow position:
Alignm length: 251
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 1-251
Cow position:
Alignm length: 255
Alignm identity: 185
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 11

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 179
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 42, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 182
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 165, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 54, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 258
Alignm identity: 185
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 202, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 255
Alignm identity: 185
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 235, 53

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 180
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 255
Alignm identity: 181
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 242, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 174
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 266
Alignm identity: 184
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 172, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 107, 53

Conread position: 1-254
Cow position:
Alignm length: 254
Alignm identity: 185
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 52, 0

Conread position: 1-255
Cow position:
Alignm length: 255
Alignm identity: 177
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 1-255
Cow position:
Alignm length: 255
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 1-255
Cow position:
Alignm length: 255
Alignm identity: 181
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 42, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 177
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 181
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 52, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 181
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 54, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 181
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 188
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 9, 0

Conread position: 1-256
Cow position:
Alignm length: 258
Alignm identity: 192
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 218, 42

Conread position: 1-256
Cow position:
Alignm length: 258
Alignm identity: 186
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 121, 53

Conread position: 1-256
Cow position:
Alignm length: 257
Alignm identity: 182
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 95, 46

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 185
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-257
Cow position:
Alignm length: 258
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 45

Conread position: 2-132
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 56

Conread position: 2-175
Cow position:
Alignm length: 174
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 41, 0

Conread position: 2-192
Cow position:
Alignm length: 191
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 2-199
Cow position:
Alignm length: 198
Alignm identity: 146
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 52, 0

Conread position: 2-202
Cow position:
Alignm length: 201
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 2-234
Cow position:
Alignm length: 233
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 2-235
Cow position:
Alignm length: 235
Alignm identity: 176
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 165, 41

Conread position: 2-239
Cow position:
Alignm length: 238
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 2-241
Cow position:
Alignm length: 240
Alignm identity: 185
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 0

Conread position: 2-241
Cow position:
Alignm length: 242
Alignm identity: 181
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 196, 44

Conread position: 2-245
Cow position:
Alignm length: 247
Alignm identity: 172
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 52, 65

Conread position: 2-252
Cow position:
Alignm length: 251
Alignm identity: 176
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 2-252
Cow position:
Alignm length: 251
Alignm identity: 187
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 40, 0

Conread position: 2-253
Cow position:
Alignm length: 257
Alignm identity: 184
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 75, 54

Conread position: 2-253
Cow position:
Alignm length: 257
Alignm identity: 187
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 75, 54

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 185
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 41, 0

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 177
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 52, 0

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 182
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 52, 0

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 182
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 41, 0

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 185
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 125, 0

Conread position: 2-253
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 55, 64

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 177
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 52, 0

Conread position: 2-255
Cow position:
Alignm length: 259
Alignm identity: 183
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 100, 34

Conread position: 2-256
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 110, 41

Conread position: 2-256
Cow position:
Alignm length: 256
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 52

Conread position: 3-208
Cow position:
Alignm length: 206
Alignm identity: 157
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 3-231
Cow position:
Alignm length: 229
Alignm identity: 173
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 44, 0

Conread position: 3-236
Cow position:
Alignm length: 234
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 49, 0

Conread position: 3-240
Cow position:
Alignm length: 243
Alignm identity: 169
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 170, 36

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 172
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 3-253
Cow position:
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 44

Conread position: 3-253
Cow position:
Alignm length: 252
Alignm identity: 176
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 157, 52

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 184
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 40, 0

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 194
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 43, 0

Conread position: 3-253
Cow position:
Alignm length: 255
Alignm identity: 173
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 165, 44

Conread position: 3-256
Cow position:
Alignm length: 255
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 49

Conread position: 3-256
Cow position:
Alignm length: 254
Alignm identity: 186
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 44, 0

Conread position: 3-256
Cow position:
Alignm length: 255
Alignm identity: 190
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 212, 51

Conread position: 4-211
Cow position:
Alignm length: 209
Alignm identity: 167
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 163, 39

Conread position: 4-253
Cow position:
Alignm length: 255
Alignm identity: 177
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 50, 0

Conread position: 4-256
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 50, 0

Conread position: 5-256
Cow position:
Alignm length: 252
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 6-255
Cow position:
Alignm length: 250
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 8-240
Cow position:
Alignm length: 233
Alignm identity: 167
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 15-256
Cow position:
Alignm length: 243
Alignm identity: 184
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 228, 29

Conread position: 22-256
Cow position:
Alignm length: 237
Alignm identity: 168
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 103, 51

Conread position: 23-252
Cow position:
Alignm length: 230
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 29-253
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 31-256
Cow position:
Alignm length: 228
Alignm identity: 176
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 89, 16

Conread position: 48-253
Cow position:
Alignm length: 206
Alignm identity: 152
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 19, 0

Conread position: 72-255
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 79-253
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 122, 0

Show alignments to all cow chromosomes.