Cow genome map

Conread name: rcte39_n4.y1

Conread position: 1-184
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 1-198
Cow position:
Alignm length: 199
Alignm identity: 150
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 186, 53

Conread position: 1-210
Cow position:
Alignm length: 210
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 1-226
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 47, 0

Conread position: 1-230
Cow position:
Alignm length: 230
Alignm identity: 163
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-235
Cow position:
Alignm length: 235
Alignm identity: 169
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-235
Cow position:
Alignm length: 235
Alignm identity: 162
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 1-241
Cow position:
Alignm length: 242
Alignm identity: 174
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 166, 53

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 176
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 1-241
Cow position:
Alignm length: 244
Alignm identity: 181
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 167, 53

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 177
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-242
Cow position:
Alignm length: 244
Alignm identity: 182
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 200, 80

Conread position: 1-242
Cow position:
Alignm length: 242
Alignm identity: 181
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 1-247
Cow position:
Alignm length: 247
Alignm identity: 184
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 52, 0

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 42, 0

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 181
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-252
Cow position:
Alignm length: 253
Alignm identity: 170
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 166, 46

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 186
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 166, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 256
Alignm identity: 180
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 164, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 42, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 166, 46

Conread position: 1-253
Cow position:
Alignm length: 255
Alignm identity: 177
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 141, 53

Conread position: 1-253
Cow position:
Alignm length: 262
Alignm identity: 188
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 174, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 42, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 189
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 110, 37

Conread position: 1-253
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 11, 26

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 255
Alignm identity: 187
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 117, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 15, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 1-254
Cow position:
Alignm length: 254
Alignm identity: 183
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-255
Cow position:
Alignm length: 274
Alignm identity: 191
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 148, 42

Conread position: 1-255
Cow position:
Alignm length: 257
Alignm identity: 190
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 93, 46

Conread position: 1-255
Cow position:
Alignm length: 257
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 43

Conread position: 1-255
Cow position:
Alignm length: 255
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 186
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 180
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 257
Alignm identity: 192
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 158, 42

Conread position: 1-256
Cow position:
Alignm length: 271
Alignm identity: 181
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 56, 209

Conread position: 1-256
Cow position:
Alignm length: 259
Alignm identity: 191
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 34, 17

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 188
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 182
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 42, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 9, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 182
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-257
Cow position:
Alignm length: 258
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 73

Conread position: 1-257
Cow position:
Alignm length: 258
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 126, 42

Conread position: 2-166
Cow position:
Alignm length: 165
Alignm identity: 136
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 23, 0

Conread position: 2-166
Cow position:
Alignm length: 166
Alignm identity: 131
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 156, 45

Conread position: 2-199
Cow position:
Alignm length: 198
Alignm identity: 159
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 45, 0

Conread position: 2-234
Cow position:
Alignm length: 234
Alignm identity: 162
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 215, 45

Conread position: 2-236
Cow position:
Alignm length: 243
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 42, 73

Conread position: 2-237
Cow position:
Alignm length: 236
Alignm identity: 176
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 56, 0

Conread position: 2-251
Cow position:
Alignm length: 253
Alignm identity: 188
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 153, 44

Conread position: 2-251
Cow position:
Alignm length: 251
Alignm identity: 184
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 146, 41

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 186
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 2-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 165, 52

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 174
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 41, 0

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 182
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 42, 0

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-257
Cow position:
Alignm length: 256
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-257
Cow position:
Alignm length: 256
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 3-241
Cow position:
Alignm length: 239
Alignm identity: 164
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 3-252
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 202, 51

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 182
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 51, 0

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 3-256
Cow position:
Alignm length: 255
Alignm identity: 181
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 229, 51

Conread position: 3-256
Cow position:
Alignm length: 254
Alignm identity: 190
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 51, 0

Conread position: 3-257
Cow position:
Alignm length: 258
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 44

Conread position: 4-256
Cow position:
Alignm length: 254
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 50

Conread position: 5-232
Cow position:
Alignm length: 233
Alignm identity: 170
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 156, 50

Conread position: 5-252
Cow position:
Alignm length: 248
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 5-253
Cow position:
Alignm length: 255
Alignm identity: 186
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 81, 42

Conread position: 7-205
Cow position:
Alignm length: 199
Alignm identity: 158
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 31, 0

Conread position: 9-256
Cow position:
Alignm length: 248
Alignm identity: 181
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 13-232
Cow position:
Alignm length: 220
Alignm identity: 167
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 30, 0

Conread position: 13-240
Cow position:
Alignm length: 230
Alignm identity: 168
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 88, 34

Conread position: 14-256
Cow position:
Alignm length: 243
Alignm identity: 174
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 29, 0

Conread position: 29-211
Cow position:
Alignm length: 184
Alignm identity: 142
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 108, 54

Conread position: 78-256
Cow position:
Alignm length: 179
Alignm identity: 139
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 79-253
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.