Cow genome map

Conread name: rcte39_n4.y1

Conread position: 1-166
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 1-185
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 177, 53

Conread position: 1-199
Cow position:
Alignm length: 199
Alignm identity: 147
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 1-240
Cow position:
Alignm length: 240
Alignm identity: 174
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 46, 0

Conread position: 1-240
Cow position:
Alignm length: 240
Alignm identity: 174
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 52, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 173
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-250
Cow position:
Alignm length: 250
Alignm identity: 181
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 172
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 177
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 206, 46

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 182
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 186, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 174
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 177
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 159, 53

Conread position: 1-253
Cow position:
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 71

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 182
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 158, 46

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 174
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 236, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 255
Alignm identity: 183
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 131, 52

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 179
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-256
Cow position:
Alignm length: 257
Alignm identity: 177
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 166, 42

Conread position: 1-257
Cow position:
Alignm length: 257
Alignm identity: 176
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 1-257
Cow position:
Alignm length: 257
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 2-212
Cow position:
Alignm length: 211
Alignm identity: 161
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 2-238
Cow position:
Alignm length: 241
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 45

Conread position: 2-252
Cow position:
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 72

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 52, 0

Conread position: 2-255
Cow position:
Alignm length: 255
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 203, 41

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-256
Cow position:
Alignm length: 256
Alignm identity: 193
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 189, 53

Conread position: 2-256
Cow position:
Alignm length: 262
Alignm identity: 185
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 43, 64

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 187
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 40, 0

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 2-257
Cow position:
Alignm length: 256
Alignm identity: 179
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 3-228
Cow position:
Alignm length: 227
Alignm identity: 172
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 208, 51

Conread position: 3-248
Cow position:
Alignm length: 249
Alignm identity: 185
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 224, 43

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 3-256
Cow position:
Alignm length: 254
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 4-252
Cow position:
Alignm length: 249
Alignm identity: 180
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 50, 0

Conread position: 4-253
Cow position:
Alignm length: 250
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 4-256
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 39, 0

Conread position: 5-238
Cow position:
Alignm length: 234
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 5-256
Cow position:
Alignm length: 252
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 5-256
Cow position:
Alignm length: 260
Alignm identity: 196
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 69, 21

Conread position: 6-253
Cow position:
Alignm length: 248
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 10-256
Cow position:
Alignm length: 249
Alignm identity: 183
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 127, 16

Conread position: 13-230
Cow position:
Alignm length: 219
Alignm identity: 171
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 159, 40

Conread position: 14-191
Cow position:
Alignm length: 178
Alignm identity: 138
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 14-256
Cow position:
Alignm length: 244
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 33

Conread position: 18-253
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 19-144
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 22-201
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 28-253
Cow position:
Alignm length: 228
Alignm identity: 173
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 24, 44

Conread position: 40-241
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 118, 43

Conread position: 44-244
Cow position:
Alignm length: 202
Alignm identity: 157
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 130, 37

Show alignments to all cow chromosomes.