Cow genome map


           Conread name:
           rcte39_n4.y1
        

               Conread position:
               1-154
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-181
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               45, 56
               

               Conread position:
               1-192
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-213
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-229
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               167, 53
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               165, 53
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               166, 37
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-255
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               74, 53
               

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 42
               

               Conread position:
               1-257
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               2-212
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               166
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               2-229
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               2-232
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               42, 67
               

               Conread position:
               2-241
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               165, 45
               

               Conread position:
               2-251
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               2-253
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 44
               

               Conread position:
               2-253
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               2-253
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               2-253
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               58, 45
               

               Conread position:
               2-253
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 14
               

               Conread position:
               2-255
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 72
               

               Conread position:
               2-256
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               2-256
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               38, 74
               

               Conread position:
               3-137
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               3-253
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               150, 39
               

               Conread position:
               3-253
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               3-256
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               190
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               4-253
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               4-256
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               193
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               4-256
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               72, 30
               

               Conread position:
               5-218
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               71-256
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               88-211
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               64, 0
               
Show alignments to all cow chromosomes.