Cow genome map

Conread name: rcte39_n4.y1

Conread position: 1-150
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 1-186
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 1-188
Cow position:
Alignm length: 188
Alignm identity: 144
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 54, 0

Conread position: 1-204
Cow position:
Alignm length: 205
Alignm identity: 160
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 181, 44

Conread position: 1-217
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 52, 0

Conread position: 1-235
Cow position:
Alignm length: 235
Alignm identity: 171
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-235
Cow position:
Alignm length: 236
Alignm identity: 169
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 166, 53

Conread position: 1-241
Cow position:
Alignm length: 242
Alignm identity: 167
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 59, 46

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-245
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-251
Cow position:
Alignm length: 251
Alignm identity: 182
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 46, 0

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 181
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 174
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 45, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 174
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 180
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 183, 53

Conread position: 1-253
Cow position:
Alignm length: 261
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 138, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-254
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 194
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-256
Cow position:
Alignm length: 267
Alignm identity: 198
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 117, 42

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 178
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 260
Alignm identity: 192
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 69, 20

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 42, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 178
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position:
Alignm length: 257
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 42

Conread position: 1-256
Cow position:
Alignm length: 259
Alignm identity: 192
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 43

Conread position: 1-257
Cow position:
Alignm length: 257
Alignm identity: 182
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 1-257
Cow position:
Alignm length: 257
Alignm identity: 184
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 52, 0

Conread position: 2-192
Cow position:
Alignm length: 191
Alignm identity: 134
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 2-234
Cow position:
Alignm length: 234
Alignm identity: 176
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 224, 52

Conread position: 2-248
Cow position:
Alignm length: 247
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 0

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 183
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 52, 0

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 2-255
Cow position:
Alignm length: 254
Alignm identity: 182
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 2-255
Cow position:
Alignm length: 254
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 2-255
Cow position:
Alignm length: 257
Alignm identity: 189
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 99, 45

Conread position: 2-255
Cow position:
Alignm length: 266
Alignm identity: 191
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 148, 43

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 191
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 21, 0

Conread position: 2-256
Cow position:
Alignm length: 256
Alignm identity: 185
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 162, 41

Conread position: 2-256
Cow position:
Alignm length: 256
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 45

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 194
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 51, 72

Conread position: 2-256
Cow position:
Alignm length: 256
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 45

Conread position: 3-241
Cow position:
Alignm length: 239
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 51, 0

Conread position: 3-241
Cow position:
Alignm length: 246
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 3-241
Cow position:
Alignm length: 239
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 3-256
Cow position:
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 3-256
Cow position:
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 3-256
Cow position:
Alignm length: 254
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 4-252
Cow position:
Alignm length: 254
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 43

Conread position: 4-256
Cow position:
Alignm length: 254
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 53

Conread position: 5-238
Cow position:
Alignm length: 235
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 36

Conread position: 5-253
Cow position:
Alignm length: 254
Alignm identity: 182
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 94, 38

Conread position: 5-253
Cow position:
Alignm length: 257
Alignm identity: 182
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 138, 49

Conread position: 13-197
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 13-253
Cow position:
Alignm length: 241
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 13-256
Cow position:
Alignm length: 244
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 37-252
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 26, 104

Conread position: 77-256
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 17, 35

Conread position: 80-255
Cow position:
Alignm length: 176
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 90-242
Cow position:
Alignm length: 153
Alignm identity: 123
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 26, 0

Show alignments to all cow chromosomes.