Cow genome map

Conread name: rcte39_n4.y1

Conread position: 1-178
Cow position:
Alignm length: 178
Alignm identity: 137
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 1-182
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 1-197
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 0

Conread position: 1-199
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 1-229
Cow position:
Alignm length: 230
Alignm identity: 171
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 126, 53

Conread position: 1-230
Cow position:
Alignm length: 230
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 1-232
Cow position:
Alignm length: 232
Alignm identity: 176
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 172
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 179
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 54, 0

Conread position: 1-241
Cow position:
Alignm length: 249
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 147, 45

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 1-242
Cow position:
Alignm length: 242
Alignm identity: 178
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 42, 0

Conread position: 1-250
Cow position:
Alignm length: 250
Alignm identity: 176
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 1-250
Cow position:
Alignm length: 251
Alignm identity: 182
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 184, 53

Conread position: 1-251
Cow position:
Alignm length: 251
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 181
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 185
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 1-252
Cow position:
Alignm length: 253
Alignm identity: 190
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 33, 55

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 255
Alignm identity: 190
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 202, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 256
Alignm identity: 178
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 165, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 177
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 237, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 188
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 188
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 8, 54

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 45, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 255
Alignm identity: 183
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 73, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-255
Cow position:
Alignm length: 255
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-255
Cow position:
Alignm length: 255
Alignm identity: 173
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 174
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 257
Alignm identity: 186
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 165, 53

Conread position: 1-256
Cow position:
Alignm length: 262
Alignm identity: 190
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 166, 42

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 259
Alignm identity: 179
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 74, 46

Conread position: 1-256
Cow position:
Alignm length: 260
Alignm identity: 190
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 129, 39

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 185
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 178
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-257
Cow position:
Alignm length: 258
Alignm identity: 183
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 95, 52

Conread position: 2-162
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 2-239
Cow position:
Alignm length: 240
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 44

Conread position: 2-251
Cow position:
Alignm length: 250
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 186
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 14, 0

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 181
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 52, 0

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 186
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 44, 0

Conread position: 2-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 161, 41

Conread position: 2-255
Cow position:
Alignm length: 254
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-255
Cow position:
Alignm length: 254
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 2-256
Cow position:
Alignm length: 264
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 41

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 186
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 161, 52

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 184
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 41, 0

Conread position: 2-257
Cow position:
Alignm length: 258
Alignm identity: 185
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 194, 35

Conread position: 3-134
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 3-242
Cow position:
Alignm length: 240
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 181
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 51, 0

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 184
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 51, 0

Conread position: 3-256
Cow position:
Alignm length: 254
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 4-253
Cow position:
Alignm length: 250
Alignm identity: 181
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 50, 0

Conread position: 4-256
Cow position:
Alignm length: 255
Alignm identity: 179
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 95, 42

Conread position: 5-204
Cow position:
Alignm length: 201
Alignm identity: 153
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 143, 41

Conread position: 13-175
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 13-256
Cow position:
Alignm length: 244
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 16-244
Cow position:
Alignm length: 229
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 25-250
Cow position:
Alignm length: 226
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 25-256
Cow position:
Alignm length: 233
Alignm identity: 174
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 129, 28

Conread position: 78-256
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 153

Conread position: 80-253
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 84-253
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 91-256
Cow position:
Alignm length: 166
Alignm identity: 134
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 63, 0

Show alignments to all cow chromosomes.