Cow genome map

Conread name: rcte39_n4.y1

Conread position: 1-140
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 1-155
Cow position:
Alignm length: 155
Alignm identity: 119
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 124
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 1-175
Cow position:
Alignm length: 175
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 1-199
Cow position:
Alignm length: 200
Alignm identity: 157
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 156, 41

Conread position: 1-228
Cow position:
Alignm length: 228
Alignm identity: 172
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 1-235
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-238
Cow position:
Alignm length: 239
Alignm identity: 177
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 149, 54

Conread position: 1-239
Cow position:
Alignm length: 243
Alignm identity: 177
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 212, 42

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 180
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 52, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 172
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 177
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 74, 53

Conread position: 1-245
Cow position:
Alignm length: 245
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-247
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-252
Cow position:
Alignm length: 253
Alignm identity: 166
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 123, 53

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 183
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 42, 0

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 182
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 132, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 47, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 183
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 207, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 37, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 182
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 120, 37

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-255
Cow position:
Alignm length: 255
Alignm identity: 181
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 47, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 182
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 8, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 180
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 192
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 47, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 42, 0

Conread position: 1-256
Cow position:
Alignm length: 257
Alignm identity: 185
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 197, 53

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 184
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 181
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 184
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-256
Cow position:
Alignm length: 258
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 45

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 1-256
Cow position:
Alignm length: 257
Alignm identity: 182
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 165, 46

Conread position: 1-256
Cow position:
Alignm length: 259
Alignm identity: 184
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 208, 53

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 180
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 46, 0

Conread position: 2-198
Cow position:
Alignm length: 197
Alignm identity: 154
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 20, 0

Conread position: 2-235
Cow position:
Alignm length: 234
Alignm identity: 176
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 2-241
Cow position:
Alignm length: 241
Alignm identity: 173
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 205, 52

Conread position: 2-250
Cow position:
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 2-252
Cow position:
Alignm length: 253
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 45

Conread position: 2-253
Cow position:
Alignm length: 253
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 45

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 183
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 45, 0

Conread position: 2-255
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 176, 45

Conread position: 2-255
Cow position:
Alignm length: 254
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-255
Cow position:
Alignm length: 254
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 2-255
Cow position:
Alignm length: 254
Alignm identity: 189
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 184
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 45, 0

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 2-256
Cow position:
Alignm length: 256
Alignm identity: 182
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 133, 12

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 186
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 41, 0

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 175
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-257
Cow position:
Alignm length: 256
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 3-222
Cow position:
Alignm length: 222
Alignm identity: 175
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 13, 33

Conread position: 3-241
Cow position:
Alignm length: 240
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 51

Conread position: 3-253
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 130, 51

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 3-256
Cow position:
Alignm length: 255
Alignm identity: 179
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 127, 10

Conread position: 3-256
Cow position:
Alignm length: 255
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 122, 40

Conread position: 3-256
Cow position:
Alignm length: 254
Alignm identity: 183
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 40, 0

Conread position: 4-255
Cow position:
Alignm length: 255
Alignm identity: 189
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 45, 70

Conread position: 5-241
Cow position:
Alignm length: 237
Alignm identity: 172
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 49, 0

Conread position: 5-241
Cow position:
Alignm length: 238
Alignm identity: 172
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 173, 38

Conread position: 5-257
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 42, 0

Conread position: 7-253
Cow position:
Alignm length: 247
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 14-241
Cow position:
Alignm length: 231
Alignm identity: 169
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 127, 40

Conread position: 16-257
Cow position:
Alignm length: 244
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 31

Conread position: 36-256
Cow position:
Alignm length: 221
Alignm identity: 160
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 42-256
Cow position:
Alignm length: 216
Alignm identity: 166
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 135, 31

Conread position: 62-252
Cow position:
Alignm length: 191
Alignm identity: 145
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 19, 0

Conread position: 66-249
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 74-256
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 80-253
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 82-256
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 146, 0

Conread position: 88-253
Cow position:
Alignm length: 166
Alignm identity: 137
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 96-252
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 43

Show alignments to all cow chromosomes.