Cow genome map

Conread name: rcte39_n4.y1

Conread position: 1-160
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 1-187
Cow position:
Alignm length: 187
Alignm identity: 145
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-217
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 36, 120

Conread position: 1-232
Cow position:
Alignm length: 233
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 42

Conread position: 1-236
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 44, 153

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 163
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 1-241
Cow position:
Alignm length: 242
Alignm identity: 177
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 165, 53

Conread position: 1-242
Cow position:
Alignm length: 243
Alignm identity: 176
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 117, 42

Conread position: 1-250
Cow position:
Alignm length: 251
Alignm identity: 177
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 224, 53

Conread position: 1-250
Cow position:
Alignm length: 250
Alignm identity: 178
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-251
Cow position:
Alignm length: 251
Alignm identity: 180
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-252
Cow position:
Alignm length: 260
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 34, 187

Conread position: 1-252
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 167, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 156, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 188
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 153, 51

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-255
Cow position:
Alignm length: 255
Alignm identity: 179
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 51, 0

Conread position: 1-256
Cow position:
Alignm length: 257
Alignm identity: 182
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 79, 53

Conread position: 1-256
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 42

Conread position: 1-256
Cow position:
Alignm length: 257
Alignm identity: 182
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 165, 53

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 188
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 52, 0

Conread position: 1-256
Cow position:
Alignm length: 258
Alignm identity: 193
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 63, 53

Conread position: 1-257
Cow position:
Alignm length: 257
Alignm identity: 194
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 52, 0

Conread position: 2-192
Cow position:
Alignm length: 191
Alignm identity: 143
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 2-234
Cow position:
Alignm length: 233
Alignm identity: 162
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 40, 0

Conread position: 2-236
Cow position:
Alignm length: 236
Alignm identity: 162
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 172, 44

Conread position: 2-237
Cow position:
Alignm length: 236
Alignm identity: 175
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 2-252
Cow position:
Alignm length: 252
Alignm identity: 182
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 116, 45

Conread position: 2-252
Cow position:
Alignm length: 251
Alignm identity: 174
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 2-253
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 218, 36

Conread position: 2-255
Cow position:
Alignm length: 254
Alignm identity: 183
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 52, 0

Conread position: 2-256
Cow position:
Alignm length: 256
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 212

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 3-222
Cow position:
Alignm length: 220
Alignm identity: 166
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 3-229
Cow position:
Alignm length: 227
Alignm identity: 163
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 40, 0

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 182
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 51, 0

Conread position: 3-256
Cow position:
Alignm length: 259
Alignm identity: 194
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 155, 40

Conread position: 3-256
Cow position:
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 3-256
Cow position:
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 22

Conread position: 5-252
Cow position:
Alignm length: 248
Alignm identity: 179
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 42, 0

Conread position: 5-255
Cow position:
Alignm length: 251
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 6-241
Cow position:
Alignm length: 237
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 65

Conread position: 10-178
Cow position:
Alignm length: 169
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 10-256
Cow position:
Alignm length: 247
Alignm identity: 178
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 37, 0

Conread position: 18-256
Cow position:
Alignm length: 240
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 10

Conread position: 19-256
Cow position:
Alignm length: 238
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 19-256
Cow position:
Alignm length: 238
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 22-256
Cow position:
Alignm length: 235
Alignm identity: 179
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 51, 0

Conread position: 78-238
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 138, 24

Conread position: 79-235
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 79-235
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.