Cow genome map


           Conread name:
           rcte39_n4.y1
        

               Conread position:
               1-121
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               1-154
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-162
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               136, 47
               

               Conread position:
               1-178
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               143
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-181
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               154, 53
               

               Conread position:
               1-199
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               110, 36
               

               Conread position:
               1-237
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-248
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-248
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-250
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               231, 46
               

               Conread position:
               1-251
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               151, 53
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               186
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 24
               

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-257
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               2-135
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               55, 72
               

               Conread position:
               2-209
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               152, 44
               

               Conread position:
               2-235
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               2-235
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               2-254
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               182, 41
               

               Conread position:
               2-256
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               42, 73
               

               Conread position:
               2-257
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 41
               

               Conread position:
               3-256
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               3-256
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               3-256
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               5-256
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               42, 67
               

               Conread position:
               14-253
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 156
               

               Conread position:
               14-256
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               15-256
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               186
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               103, 27
               
Show alignments to all cow chromosomes.