Cow genome map
Conread name: | rcte39_n4.y1 |
Conread position: | 1-121 |
Cow position: | chr25:21949801-21949917 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 95 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 1-154 |
Cow position: | chr25:35571822-35571971 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 114 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-162 |
Cow position: | chr25:35626228-35626073 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 122 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 136, 47 |
Conread position: | 1-178 |
Cow position: | chr25:28420702-28420527 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 143 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-181 |
Cow position: | chr25:41353411-41353236 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 131 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 154, 53 |
Conread position: | 1-199 |
Cow position: | chr25:14756406-14756214 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 151 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 110, 36 |
Conread position: | 1-237 |
Cow position: | chr25:20633764-20633994 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 174 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-241 |
Cow position: | chr25:17993138-17992908 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 179 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-244 |
Cow position: | chr25:23393876-23394107 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 181 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-248 |
Cow position: | chr25:13960070-13960308 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 176 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-248 |
Cow position: | chr25:27231362-27231601 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 178 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-250 |
Cow position: | chr25:26353781-26353537 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 183 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 231, 46 |
Conread position: | 1-251 |
Cow position: | chr25:37593408-37593651 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 184 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-252 |
Cow position: | chr25:12939204-12938957 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 180 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr25:6955071-6955318 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 183 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-253 |
Cow position: | chr25:11955834-11956081 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 1-253 |
Cow position: | chr25:13786977-13787225 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 185 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr25:17554256-17554011 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 187 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 1-253 |
Cow position: | chr25:17657623-17657870 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 1-253 |
Cow position: | chr25:18269476-18269728 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 180 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 151, 53 |
Conread position: | 1-253 |
Cow position: | chr25:18886478-18886233 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 184 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr25:19337322-19337076 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 178 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr25:19923530-19923772 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 179 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr25:25480595-25480359 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 187 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-253 |
Cow position: | chr25:26282028-26282275 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 182 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr25:28862875-28863123 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 181 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr25:29358009-29357761 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 179 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr25:29802742-29802494 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 182 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr25:32577659-32577411 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 183 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr25:34503219-34502971 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 184 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-253 |
Cow position: | chr25:39386826-39386578 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 183 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 1-253 |
Cow position: | chr25:41135742-41135497 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 186 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-256 |
Cow position: | chr25:10013058-10012808 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 24 |
Conread position: | 1-256 |
Cow position: | chr25:16922786-16922537 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 1-256 |
Cow position: | chr25:22151108-22151359 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1-256 |
Cow position: | chr25:23326023-23325774 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 179 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 1-256 |
Cow position: | chr25:33838386-33838630 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 184 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 1-256 |
Cow position: | chr25:40322287-40322036 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 1-256 |
Cow position: | chr25:41098188-41097944 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 182 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-257 |
Cow position: | chr25:12082343-12082096 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 2-135 |
Cow position: | chr25:30340357-30340225 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 112 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 55, 72 |
Conread position: | 2-209 |
Cow position: | chr25:10634002-10633802 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 155 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 152, 44 |
Conread position: | 2-235 |
Cow position: | chr25:26922845-26923071 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 171 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 2-235 |
Cow position: | chr25:26931100-26931329 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 177 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 2-254 |
Cow position: | chr25:35553671-35553920 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 176 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 182, 41 |
Conread position: | 2-256 |
Cow position: | chr25:33262629-33262882 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 182 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 42, 73 |
Conread position: | 2-257 |
Cow position: | chr25:20075484-20075732 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 41 |
Conread position: | 3-256 |
Cow position: | chr25:3172394-3172164 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 185 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 3-256 |
Cow position: | chr25:26896057-26896300 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 169 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 3-256 |
Cow position: | chr25:29313313-29313068 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 5-256 |
Cow position: | chr25:33688203-33687953 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 180 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 42, 67 |
Conread position: | 14-253 |
Cow position: | chr25:393276-393512 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 156 |
Conread position: | 14-256 |
Cow position: | chr25:18486478-18486713 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 15-256 |
Cow position: | chr25:34667964-34668202 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 186 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 103, 27 |
Show alignments to all cow chromosomes.