Cow genome map


           Conread name:
           rcte39_n4.y1
        

               Conread position:
               1-103
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-119
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               114, 45
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-235
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               149, 53
               

               Conread position:
               1-235
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               1-235
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-240
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               114, 53
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               73, 53
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               115, 53
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               134, 42
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               11, 54
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-254
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               114, 53
               

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               140, 50
               

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               69, 53
               

               Conread position:
               1-257
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               53, 101
               

               Conread position:
               2-233
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               2-236
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               2-239
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               2-253
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               145, 45
               

               Conread position:
               2-253
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               2-253
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               2-253
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               2-253
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               2-255
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               2-255
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               143, 45
               

               Conread position:
               2-256
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 43
               

               Conread position:
               3-213
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               164
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               39, 11
               

               Conread position:
               3-253
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               4-252
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               120, 39
               

               Conread position:
               4-256
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               5-226
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               35-256
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               12, 54
               

               Conread position:
               79-253
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.