Cow genome map

Conread name: rcte39_n4.y1

Conread position: 1-103
Cow position: chr26:1614383-1614481 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 1-119
Cow position: chr26:2244247-2244131 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 114, 45

Conread position: 1-217
Cow position: chr26:9558621-9558409 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 1-235
Cow position: chr26:5679789-5680021 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 149, 53

Conread position: 1-235
Cow position: chr26:20218514-20218732 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 1-235
Cow position: chr26:20496795-20497019 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-240
Cow position: chr26:6429844-6430077 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-241
Cow position: chr26:9694537-9694302 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-241
Cow position: chr26:20186581-20186796 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 1-243
Cow position: chr26:27987330-27987102 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 114, 53

Conread position: 1-252
Cow position: chr26:1885272-1885516 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 1-252
Cow position: chr26:4324455-4324215 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 187
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 43, 0

Conread position: 1-253
Cow position: chr26:386939-387187 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position: chr26:1088443-1088684 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 1-253
Cow position: chr26:2201789-2202035 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 73, 53

Conread position: 1-253
Cow position: chr26:6843961-6843713 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 37, 0

Conread position: 1-253
Cow position: chr26:7459705-7459455 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 115, 53

Conread position: 1-253
Cow position: chr26:8084085-8084333 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position: chr26:8739158-8738910 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position: chr26:8873105-8873352 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position: chr26:9115298-9115545 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position: chr26:17429216-17428968 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position: chr26:18857379-18857622 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position: chr26:23889671-23889914 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position: chr26:26286118-26286367 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 134, 42

Conread position: 1-253
Cow position: chr26:29433491-29433739 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position: chr26:30725659-30725410 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 181
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position: chr26:34015101-34015344 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 11, 54

Conread position: 1-253
Cow position: chr26:35423758-35424004 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 42, 0

Conread position: 1-254
Cow position: chr26:18804111-18803861 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 114, 53

Conread position: 1-256
Cow position: chr26:1620914-1621157 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position: chr26:3187018-3187266 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 174
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 140, 50

Conread position: 1-256
Cow position: chr26:13773310-13773561 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position: chr26:14487998-14487751 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 69, 53

Conread position: 1-257
Cow position: chr26:3689749-3690018 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 53, 101

Conread position: 2-233
Cow position: chr26:30625353-30625127 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 2-236
Cow position: chr26:34030821-34031044 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 2-239
Cow position: chr26:19795313-19795546 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 2-253
Cow position: chr26:8308504-8308246 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 145, 45

Conread position: 2-253
Cow position: chr26:10490504-10490746 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 44, 0

Conread position: 2-253
Cow position: chr26:15199288-15199533 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 52, 0

Conread position: 2-253
Cow position: chr26:17169090-17169337 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 45, 0

Conread position: 2-253
Cow position: chr26:17393635-17393392 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 52, 0

Conread position: 2-255
Cow position: chr26:13806767-13806520 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 45, 0

Conread position: 2-255
Cow position: chr26:24238961-24239208 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 143, 45

Conread position: 2-256
Cow position: chr26:17288070-17288321 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 43

Conread position: 3-213
Cow position: chr26:4548870-4549077 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 39, 11

Conread position: 3-253
Cow position: chr26:22691651-22691893 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 4-252
Cow position: chr26:22621469-22621714 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 120, 39

Conread position: 4-256
Cow position: chr26:23810163-23809916 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 39, 0

Conread position: 5-226
Cow position: chr26:11269485-11269701 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 35-256
Cow position: chr26:8810147-8810364 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 12, 54

Conread position: 79-253
Cow position: chr26:7677067-7677241 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.